RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 MLANAQ16655 118 aa13.42□□□□□ -0.26
HMGCS1-206ENST00000511774 SPATA12Q7Z6I5 190 aa13.42□□□□□ -0.26
HMGCS1-206ENST00000511774 C6orf223Q8N319 242 aa13.42□□□□□ -0.26
HMGCS1-206ENST00000511774 SEC22AQ96IW7 307 aa13.42□□□□□ -0.26
HMGCS1-206ENST00000511774 NIPSNAP3BQ9BS92 247 aa13.42□□□□□ -0.26
HMGCS1-206ENST00000511774 YTHDF1Q9BYJ9 559 aaKnown RBP13.42□□□□□ -0.26
HMGCS1-206ENST00000511774 FXYD6Q9H0Q3 95 aa13.42□□□□□ -0.26
HMGCS1-206ENST00000511774 U3KQE9 123 aa13.42□□□□□ -0.26
HMGCS1-206ENST00000511774 SRRM2Q9UQ35 2752 aaKnown RBP13.41□□□□□ -0.26
HMGCS1-206ENST00000511774 NBDYA0A0U1RRE5 68 aa13.41□□□□□ -0.26
HMGCS1-206ENST00000511774 A0A1W2PS18 150 aa13.41□□□□□ -0.26
HMGCS1-206ENST00000511774 SCGNO76038 276 aa13.41□□□□□ -0.26
HMGCS1-206ENST00000511774 RFX2P48378 723 aa13.41□□□□□ -0.26
HMGCS1-206ENST00000511774 FXYD7P58549 80 aa13.41□□□□□ -0.26
HMGCS1-206ENST00000511774 HERV-K104P61576 105 aa13.41□□□□□ -0.26
HMGCS1-206ENST00000511774 IZUMO4Q1ZYL8 232 aa13.41□□□□□ -0.26
HMGCS1-206ENST00000511774 GLMPQ8WWB7 406 aa13.41□□□□□ -0.26
HMGCS1-206ENST00000511774 METTL26Q96S19 204 aa13.41□□□□□ -0.26
HMGCS1-206ENST00000511774 C1QTNF4Q9BXJ3 329 aa13.41□□□□□ -0.26
HMGCS1-206ENST00000511774 FNDC4Q9H6D8 234 aaPredicted RBP13.41□□□□□ -0.26
HMGCS1-206ENST00000511774 AUNIPQ9H7T9 357 aa13.41□□□□□ -0.26
HMGCS1-206ENST00000511774 IGHV3OR16-12A0A075B7B8 117 aa13.4□□□□□ -0.26
HMGCS1-206ENST00000511774 FAM90A26D6RGX4 464 aa13.4□□□□□ -0.26
HMGCS1-206ENST00000511774 IGKV1-17P01599 117 aa13.4□□□□□ -0.26
HMGCS1-206ENST00000511774 FGF9P31371 208 aaPredicted RBP13.4□□□□□ -0.26
HMGCS1-206ENST00000511774 KRTAP10-2P60368 255 aa13.4□□□□□ -0.26
HMGCS1-206ENST00000511774 TBCEQ15813 527 aaPredicted RBP13.4□□□□□ -0.26
HMGCS1-206ENST00000511774 GDF5OSQ5U4N7 250 aa13.4□□□□□ -0.26
HMGCS1-206ENST00000511774 DHRS11Q6UWP2 260 aa13.4□□□□□ -0.26
HMGCS1-206ENST00000511774 ZNRF2Q8NHG8 242 aa13.4□□□□□ -0.26
HMGCS1-206ENST00000511774 TSC22D3Q99576 134 aa13.4□□□□□ -0.26
HMGCS1-206ENST00000511774 ZNF2Q9BSG1 426 aaPredicted RBP13.4□□□□□ -0.26
HMGCS1-206ENST00000511774 EHFQ9NZC4 300 aa13.4□□□□□ -0.26
HMGCS1-206ENST00000511774 RRP15Q9Y3B9 282 aaKnown RBP13.4□□□□□ -0.26
HMGCS1-206ENST00000511774 HSPE1P61604 102 aaKnown RBP13.39□□□□□ -0.27
HMGCS1-206ENST00000511774 SFXN4Q6P4A7 337 aa13.39□□□□□ -0.27
HMGCS1-206ENST00000511774 TSPAN14Q8NG11 270 aa13.39□□□□□ -0.27
HMGCS1-206ENST00000511774 TMEM189A5PLL7 270 aa13.38□□□□□ -0.27
HMGCS1-206ENST00000511774 CLEC2LP0C7M8 214 aa13.38□□□□□ -0.27
HMGCS1-206ENST00000511774 TIGITQ495A1 244 aa13.38□□□□□ -0.27
HMGCS1-206ENST00000511774 C16orf54Q6UWD8 224 aa13.38□□□□□ -0.27
HMGCS1-206ENST00000511774 OR4A16Q8NH70 328 aa13.38□□□□□ -0.27
HMGCS1-206ENST00000511774 TXNL4BQ9NX01 149 aaKnown RBP13.38□□□□□ -0.27
HMGCS1-206ENST00000511774 RFNGQ9Y644 331 aa13.38□□□□□ -0.27
HMGCS1-206ENST00000511774 CLN5O75503 358 aa13.37□□□□□ -0.27
HMGCS1-206ENST00000511774 RNASE2P10153 161 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-206ENST00000511774 HLA-DRB4P13762 266 aa13.37□□□□□ -0.27
HMGCS1-206ENST00000511774 AQP4P55087 323 aa13.37□□□□□ -0.27
HMGCS1-206ENST00000511774 NUTF2P61970 127 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-206ENST00000511774 ERHP84090 104 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-206ENST00000511774 PHLDA2Q53GA4 152 aa13.37□□□□□ -0.27
HMGCS1-206ENST00000511774 MRGPRFQ96AM1 343 aa13.37□□□□□ -0.27
HMGCS1-206ENST00000511774 HLA-DRB4X5D2U9 266 aa13.37□□□□□ -0.27
HMGCS1-206ENST00000511774 SMIM9A6NGZ8 99 aa13.36□□□□□ -0.27
HMGCS1-206ENST00000511774 GPR31O00270 319 aa13.36□□□□□ -0.27
HMGCS1-206ENST00000511774 IGKV3-20P01619 116 aa13.36□□□□□ -0.27
HMGCS1-206ENST00000511774 PMP2P02689 132 aa13.36□□□□□ -0.27
HMGCS1-206ENST00000511774 FAM3BP58499 235 aaPredicted RBP13.36□□□□□ -0.27
HMGCS1-206ENST00000511774 OXA1LQ15070 435 aa13.36□□□□□ -0.27
HMGCS1-206ENST00000511774 KCTD21Q4G0X4 260 aa13.36□□□□□ -0.27
HMGCS1-206ENST00000511774 H2BFWTQ7Z2G1 175 aa13.36□□□□□ -0.27
HMGCS1-206ENST00000511774 ZNF709Q8N972 641 aa13.36□□□□□ -0.27
HMGCS1-206ENST00000511774 BORCS5Q969J3 196 aa13.36□□□□□ -0.27
HMGCS1-206ENST00000511774 RNF167Q9H6Y7 350 aa13.36□□□□□ -0.27
HMGCS1-206ENST00000511774 TMED3Q9Y3Q3 217 aa13.36□□□□□ -0.27
HMGCS1-206ENST00000511774 GSG1LQ6UXU4 331 aa13.35□□□□□ -0.27
HMGCS1-206ENST00000511774 TMEM230Q96A57 120 aa13.35□□□□□ -0.27
HMGCS1-206ENST00000511774 ANAPC10Q9UM13 185 aa13.35□□□□□ -0.27
HMGCS1-206ENST00000511774 YTHDF2Q9Y5A9 579 aaKnown RBP13.35□□□□□ -0.27
HMGCS1-206ENST00000511774 CMTM1Q8IZ96 169 aa13.34□□□□□ -0.27
HMGCS1-206ENST00000511774 C1orf158Q8N1D5 194 aa13.34□□□□□ -0.27
HMGCS1-206ENST00000511774 OR4X1Q8NH49 305 aa13.34□□□□□ -0.27
HMGCS1-206ENST00000511774 KRTAP1-5Q9BYS1 174 aa13.34□□□□□ -0.27
HMGCS1-206ENST00000511774 EPM2AB3EWF7 344 aa13.33□□□□□ -0.28
HMGCS1-206ENST00000511774 INAFM2P0DMQ5 153 aa13.33□□□□□ -0.28
HMGCS1-206ENST00000511774 TBC1D26Q86UD7 250 aa13.33□□□□□ -0.28
HMGCS1-206ENST00000511774 SLC35B3Q9H1N7 401 aa13.33□□□□□ -0.28
HMGCS1-206ENST00000511774 A0A0B4J293 547 aa13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 TEX48A0A1B0GUV7 120 aa13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 LOC102723971A0A1B0GUV8 181 aa13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 INS-IGF2F8WCM5 200 aa13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 IGKV1-5P01602 117 aa13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 P0C879 139 aa13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 SDC2P34741 201 aa13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 SNCAP37840 140 aa13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 CBX5P45973 191 aa13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 SNRPD3P62318 126 aaKnown RBP13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 MXD1Q05195 221 aa13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 USF2Q15853 346 aaPredicted RBP13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 C15orf53Q8NAA6 179 aa13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 NRG4Q8WWG1 115 aa13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 NARS2Q96I59 477 aaKnown RBP13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 ATG101Q9BSB4 218 aa13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 NRN1Q9NPD7 142 aa13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 FAM212BQ9NTI7 297 aaPredicted RBP13.32□□□□□ -0.28
HMGCS1-206ENST00000511774 A0A0A6YYH2 397 aa13.31□□□□□ -0.28
HMGCS1-206ENST00000511774 A6NJ64 397 aa13.31□□□□□ -0.28
HMGCS1-206ENST00000511774 HNRNPCP07910 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
HMGCS1-206ENST00000511774 OPRK1P41145 380 aa13.31□□□□□ -0.28
HMGCS1-206ENST00000511774 DAD1P61803 113 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms