RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 TOMM40O96008 361 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 TYMSP04818 313 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 ZNF79Q15937 498 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 FAM110DQ8TAY7 271 aaPredicted RBP4.85□□□□□ -1.63
USP38-203ENST00000511739 FMC1Q96HJ9 113 aa4.85□□□□□ -1.63
USP38-203ENST00000511739 A0A1W2PR77 199 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 C12orf77C9JDV5 145 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 SLC25A16P16260 332 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 SRSF6Q13247 344 aaKnown RBP4.84□□□□□ -1.63
USP38-203ENST00000511739 Q6AWC8 147 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 ALX4Q9H161 411 aaPredicted RBP4.84□□□□□ -1.63
USP38-203ENST00000511739 MS4A6AQ9H2W1 248 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 CYSLTR1Q9Y271 337 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 OVOL1O14753 267 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 CLPSP04118 112 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 SDHCQ99643 169 aaPredicted RBP4.84□□□□□ -1.63
USP38-203ENST00000511739 TMEM126AQ9H061 195 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 V9GYH0 126 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 IGKV1D-42A0A075B6H8 117 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 IGLV1-36A0A0B4J1U3 117 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 A0A1B0GWB2 263 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 IGFBP2P18065 325 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 PVRIGQ6DKI7 326 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 LAIR2Q6ISS4 152 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 TEX38Q6PEX7 206 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 TMEM91Q6ZNR0 172 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 TMEM219Q86XT9 240 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 FAM90A1Q86YD7 464 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 ORMDL3Q8N138 153 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 UBE2E2Q96LR5 201 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 Q96M66 194 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 SLC25A2Q9BXI2 301 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 Q9H3A6 140 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 DIDO1Q9BTC0 2240 aaKnown RBP4.84□□□□□ -1.63
USP38-203ENST00000511739 IGHV4-39P01824 125 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 DEFB130BP0DP73 79 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 DEFB130AP0DP74 79 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 C6orf226Q5I0X4 101 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 ATOH7Q8N100 152 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 ZCCHC24Q8N2G6 241 aaKnown RBP4.84□□□□□ -1.63
USP38-203ENST00000511739 PIP4P2Q8N4L2 257 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 SELENOKQ9Y6D0 94 aa4.84□□□□□ -1.63
USP38-203ENST00000511739 TRAV9-2A0A087WT02 112 aa4.84□□□□□ -1.64
USP38-203ENST00000511739 H3BUX3 64 aa4.84□□□□□ -1.64
USP38-203ENST00000511739 ZNF708P17019 499 aa4.84□□□□□ -1.64
USP38-203ENST00000511739 EGR4Q05215 589 aa4.84□□□□□ -1.64
USP38-203ENST00000511739 PSG7Q13046 419 aa4.84□□□□□ -1.64
USP38-203ENST00000511739 ZNF345Q14585 488 aa4.84□□□□□ -1.64
USP38-203ENST00000511739 SIGLEC15Q6ZMC9 328 aa4.84□□□□□ -1.64
USP38-203ENST00000511739 MTURNQ8N3F0 131 aa4.84□□□□□ -1.64
USP38-203ENST00000511739 LINC01356Q8N9X3 169 aa4.84□□□□□ -1.64
USP38-203ENST00000511739 CACNG8Q8WXS5 425 aa4.84□□□□□ -1.64
USP38-203ENST00000511739 WDYHV1Q96HA8 205 aa4.84□□□□□ -1.64
USP38-203ENST00000511739 TRAF4Q9BUZ4 470 aaPredicted RBP4.84□□□□□ -1.64
USP38-203ENST00000511739 FAM206AQ9NX38 181 aa4.84□□□□□ -1.64
USP38-203ENST00000511739 TRAV2A0A0B4J234 112 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 A0A1B0GW15 77 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 C1QL1O75973 258 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 CXCL3P19876 107 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 P2RY4P51582 365 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 Q71RC1 249 aaPredicted RBP4.83□□□□□ -1.64
USP38-203ENST00000511739 RNF125Q96EQ8 232 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 NEUROG3Q9Y4Z2 214 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 CACNA1BQ00975 2339 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 TANC1Q9C0D5 1861 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 TMEM8BA6NDV4 472 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 TIMM23O14925 209 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 CGAP01215 116 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 TRGC2P03986 189 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 UMODP07911 640 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 SRSF4Q08170 494 aaKnown RBP4.83□□□□□ -1.64
USP38-203ENST00000511739 ZNF672Q499Z4 452 aaPredicted RBP4.83□□□□□ -1.64
USP38-203ENST00000511739 ACTL10Q5JWF8 245 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 ZNF257Q9Y2Q1 563 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 F5H768 121 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 LDLRAD4O15165 306 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 C1QCP02747 245 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 AMELYQ99218 206 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 PSMG3Q9BT73 122 aaPredicted RBP4.83□□□□□ -1.64
USP38-203ENST00000511739 MIXL1Q9H2W2 232 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 RPP21Q9H633 154 aaKnown RBP4.83□□□□□ -1.64
USP38-203ENST00000511739 IGHV3-73A0A0B4J1V6 119 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 PRCDQ00LT1 54 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 C2orf68Q2NKX9 166 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 Q5PR19 223 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 GGACTQ9BVM4 153 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 PARD6GQ9BYG4 376 aaPredicted RBP4.83□□□□□ -1.64
USP38-203ENST00000511739 GVINP1Q7Z2Y8 2422 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 NPIPB13A6NJU9 1138 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 ZNF561-AS1K7EIQ3 104 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 DAD1P61803 113 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 BRD3OSQ6XYD6 125 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 OTORQ9NRC9 128 aa4.83□□□□□ -1.64
USP38-203ENST00000511739 H0YL77 283 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 LINC00614P0C842 121 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 GZMBP10144 247 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 LHX2P50458 406 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 SRSF1Q07955 248 aaKnown RBP eCLIP4.82□□□□□ -1.64
USP38-203ENST00000511739 SS18Q15532 418 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 VMO1Q7Z5L0 202 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms