RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 IGF1P05019 195 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 ZP3P21754 424 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 OR10J1P30954 320 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 CDC34P49427 236 aaPredicted RBP12□□□□□ -0.49
SCLT1-209ENST00000511426 PPT1P50897 306 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 RND2P52198 227 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 PEA15Q15121 130 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 DEFB112Q30KQ8 113 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 MIC13Q5XKP0 118 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 NPIPB3Q92617 1050 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 HSPB9Q9BQS6 159 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 FAM103A1Q9BTL3 118 aaKnown RBP12□□□□□ -0.49
SCLT1-209ENST00000511426 MAP1LC3BQ9GZQ8 125 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 VSIRQ9H7M9 311 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 DMRT1Q9Y5R6 373 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 HELZ2Q9BYK8 2649 aaKnown RBP11.99□□□□□ -0.49
SCLT1-209ENST00000511426 TRAV30A0A087WSZ9 112 aa11.99□□□□□ -0.49
SCLT1-209ENST00000511426 A0A1W2PPV4 95 aa11.99□□□□□ -0.49
SCLT1-209ENST00000511426 ZFP92A6NM28 416 aa11.99□□□□□ -0.49
SCLT1-209ENST00000511426 ATP6V0E1O15342 81 aa11.99□□□□□ -0.49
SCLT1-209ENST00000511426 IFNA1P01562 189 aa11.99□□□□□ -0.49
SCLT1-209ENST00000511426 IGHG2P01859 326 aa11.99□□□□□ -0.49
SCLT1-209ENST00000511426 CD5P06127 495 aa11.99□□□□□ -0.49
SCLT1-209ENST00000511426 FCGR2BP31994 310 aaPredicted RBP11.99□□□□□ -0.49
SCLT1-209ENST00000511426 RHOBP62745 196 aa11.99□□□□□ -0.49
SCLT1-209ENST00000511426 ZNF726P1Q15940 193 aa11.99□□□□□ -0.49
SCLT1-209ENST00000511426 TOR2AQ5JU69 321 aa11.99□□□□□ -0.49
SCLT1-209ENST00000511426 OR2T6Q8NHC8 308 aa11.99□□□□□ -0.49
SCLT1-209ENST00000511426 ATP6V0BQ99437 205 aa11.99□□□□□ -0.49
SCLT1-209ENST00000511426 PFDN5Q99471 154 aa11.99□□□□□ -0.49
SCLT1-209ENST00000511426 K7EIM0 57 aa11.98□□□□□ -0.49
SCLT1-209ENST00000511426 CD5LO43866 347 aa11.98□□□□□ -0.49
SCLT1-209ENST00000511426 YIF1AO95070 293 aa11.98□□□□□ -0.49
SCLT1-209ENST00000511426 AMY1AP04745 511 aa11.98□□□□□ -0.49
SCLT1-209ENST00000511426 LINC00869P0C866 280 aa11.98□□□□□ -0.49
SCLT1-209ENST00000511426 APELAP0DMC3 54 aa11.98□□□□□ -0.49
SCLT1-209ENST00000511426 IER3P46695 156 aa11.98□□□□□ -0.49
SCLT1-209ENST00000511426 NPBWR1P48145 328 aa11.98□□□□□ -0.49
SCLT1-209ENST00000511426 Q6YL49 198 aa11.98□□□□□ -0.49
SCLT1-209ENST00000511426 TMEM219Q86XT9 240 aa11.98□□□□□ -0.49
SCLT1-209ENST00000511426 OR1L4Q8NGR5 311 aa11.98□□□□□ -0.49
SCLT1-209ENST00000511426 VN1R17PQ8TDU5 208 aa11.98□□□□□ -0.49
SCLT1-209ENST00000511426 GATAD1Q8WUU5 269 aa11.98□□□□□ -0.49
SCLT1-209ENST00000511426 FANCD2OSQ96PS1 177 aa11.98□□□□□ -0.49
SCLT1-209ENST00000511426 TXN2Q99757 166 aa11.98□□□□□ -0.49
SCLT1-209ENST00000511426 H3BUA1 57 aa11.97□□□□□ -0.49
SCLT1-209ENST00000511426 CLN5O75503 358 aa11.97□□□□□ -0.49
SCLT1-209ENST00000511426 PSMB3P49720 205 aa11.97□□□□□ -0.49
SCLT1-209ENST00000511426 MLANAQ16655 118 aa11.97□□□□□ -0.49
SCLT1-209ENST00000511426 GUK1Q16774 197 aa11.97□□□□□ -0.49
SCLT1-209ENST00000511426 UNQ5815/PRO19632Q6UWF5 114 aa11.97□□□□□ -0.49
SCLT1-209ENST00000511426 RAB24Q969Q5 203 aa11.97□□□□□ -0.49
SCLT1-209ENST00000511426 TMUB1Q9BVT8 246 aa11.97□□□□□ -0.49
SCLT1-209ENST00000511426 MRPL32Q9BYC8 188 aaKnown RBP11.97□□□□□ -0.49
SCLT1-209ENST00000511426 TNFRSF19Q9NS68 423 aa11.97□□□□□ -0.49
SCLT1-209ENST00000511426 GAR1Q9NY12 217 aaKnown RBP11.97□□□□□ -0.49
SCLT1-209ENST00000511426 CELSR2Q9HCU4 2923 aa11.97□□□□□ -0.49
SCLT1-209ENST00000511426 TACC2O95359 2948 aa11.97□□□□□ -0.49
SCLT1-209ENST00000511426 IGKV1D-37A0A075B6S9 117 aa11.97□□□□□ -0.49
SCLT1-209ENST00000511426 ELOA3CA0A087WX78 387 aaPredicted RBP11.97□□□□□ -0.49
SCLT1-209ENST00000511426 SCGB2A2Q13296 93 aa11.97□□□□□ -0.49
SCLT1-209ENST00000511426 FAM122CQ6P4D5 195 aa11.97□□□□□ -0.49
SCLT1-209ENST00000511426 RBMS3Q6XE24 437 aaKnown RBP11.97□□□□□ -0.49
SCLT1-209ENST00000511426 BPIFCQ8NFQ6 507 aa11.97□□□□□ -0.49
SCLT1-209ENST00000511426 VPREB3Q9UKI3 123 aa11.97□□□□□ -0.49
SCLT1-209ENST00000511426 APCP25054 2843 aa11.96□□□□□ -0.5
SCLT1-209ENST00000511426 TMEM218A2RU14 115 aa11.96□□□□□ -0.5
SCLT1-209ENST00000511426 OR5G3P0C626 314 aa11.96□□□□□ -0.5
SCLT1-209ENST00000511426 MFAP4P55083 255 aa11.96□□□□□ -0.5
SCLT1-209ENST00000511426 TAS2R45P59539 299 aa11.96□□□□□ -0.5
SCLT1-209ENST00000511426 PLP1P60201 277 aa11.96□□□□□ -0.5
SCLT1-209ENST00000511426 KHDC3LQ587J8 217 aa11.96□□□□□ -0.5
SCLT1-209ENST00000511426 C19orf54Q5BKX5 351 aa11.96□□□□□ -0.5
SCLT1-209ENST00000511426 LCN15Q6UWW0 184 aa11.96□□□□□ -0.5
SCLT1-209ENST00000511426 SLC35E3Q7Z769 313 aa11.96□□□□□ -0.5
SCLT1-209ENST00000511426 TMEM86BQ8N661 226 aa11.96□□□□□ -0.5
SCLT1-209ENST00000511426 SLC25A22Q9H936 323 aa11.96□□□□□ -0.5
SCLT1-209ENST00000511426 MANBALQ9NQG1 85 aa11.96□□□□□ -0.5
SCLT1-209ENST00000511426 TRBV9A0A0B4J1U6 114 aa11.95□□□□□ -0.5
SCLT1-209ENST00000511426 TRAV41A0A0B4J266 112 aa11.95□□□□□ -0.5
SCLT1-209ENST00000511426 RBFOX3A6NFN3 312 aa11.95□□□□□ -0.5
SCLT1-209ENST00000511426 AP4M1O00189 453 aa11.95□□□□□ -0.5
SCLT1-209ENST00000511426 IGLC1P0CG04 106 aa11.95□□□□□ -0.5
SCLT1-209ENST00000511426 STAG3L2P0CL84 134 aa11.95□□□□□ -0.5
SCLT1-209ENST00000511426 STAG3L3P0CL85 134 aa11.95□□□□□ -0.5
SCLT1-209ENST00000511426 HNF1AP20823 631 aa11.95□□□□□ -0.5
SCLT1-209ENST00000511426 LY6EQ16553 131 aa11.95□□□□□ -0.5
SCLT1-209ENST00000511426 ZNF506Q5JVG8 444 aa11.95□□□□□ -0.5
SCLT1-209ENST00000511426 S100A7AQ86SG5 101 aa11.95□□□□□ -0.5
SCLT1-209ENST00000511426 CIARTQ8N365 385 aaPredicted RBP11.95□□□□□ -0.5
SCLT1-209ENST00000511426 NECAP1Q8NC96 275 aa11.95□□□□□ -0.5
SCLT1-209ENST00000511426 SCRT1Q9BWW7 348 aa11.95□□□□□ -0.5
SCLT1-209ENST00000511426 EIF5A2Q9GZV4 153 aaKnown RBP11.95□□□□□ -0.5
SCLT1-209ENST00000511426 TREM1Q9NP99 234 aa11.95□□□□□ -0.5
SCLT1-209ENST00000511426 TMEM160Q9NX00 188 aa11.95□□□□□ -0.5
SCLT1-209ENST00000511426 CXorf1O96002 111 aa11.94□□□□□ -0.5
SCLT1-209ENST00000511426 HSPB1P04792 205 aaKnown RBP11.94□□□□□ -0.5
SCLT1-209ENST00000511426 ECSCRQ19T08 205 aa11.94□□□□□ -0.5
SCLT1-209ENST00000511426 BCL6BQ8N143 479 aaPredicted RBP11.94□□□□□ -0.5
SCLT1-209ENST00000511426 NARS2Q96I59 477 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms