RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 CST9LQ9H4G1 147 aa1.98□□□□□ -2.09
CHD1-206ENST00000511067 CMTM6Q9NX76 183 aa1.98□□□□□ -2.09
CHD1-206ENST00000511067 MYOM2P54296 1465 aa1.98□□□□□ -2.09
CHD1-206ENST00000511067 ABCC5O15440 1437 aa1.98□□□□□ -2.09
CHD1-206ENST00000511067 DEPDC5O75140 1603 aa1.98□□□□□ -2.09
CHD1-206ENST00000511067 ECM29Q5VYK3 1845 aa1.98□□□□□ -2.09
CHD1-206ENST00000511067 KIF20BQ96Q89 1820 aa1.98□□□□□ -2.09
CHD1-206ENST00000511067 INTS1Q8N201 2190 aaKnown RBP1.98□□□□□ -2.09
CHD1-206ENST00000511067 ANKRD30AQ9BXX3 1397 aa1.98□□□□□ -2.09
CHD1-206ENST00000511067 MYOFQ9NZM1 2061 aa1.97□□□□□ -2.09
CHD1-206ENST00000511067 TRGC1P0CF51 173 aa1.97□□□□□ -2.09
CHD1-206ENST00000511067 AKR1C3P42330 323 aa1.97□□□□□ -2.09
CHD1-206ENST00000511067 SPOPLQ6IQ16 392 aa1.97□□□□□ -2.09
CHD1-206ENST00000511067 DEFB119Q8N690 84 aa1.97□□□□□ -2.09
CHD1-206ENST00000511067 OR13C4Q8NGS5 318 aa1.97□□□□□ -2.09
CHD1-206ENST00000511067 NAA38Q9BRA0 125 aaKnown RBP1.97□□□□□ -2.09
CHD1-206ENST00000511067 DERL1Q9BUN8 251 aa1.97□□□□□ -2.09
CHD1-206ENST00000511067 COMMD5Q9GZQ3 224 aa1.97□□□□□ -2.09
CHD1-206ENST00000511067 MRPL27Q9P0M9 148 aaKnown RBP1.97□□□□□ -2.09
CHD1-206ENST00000511067 MED13Q9UHV7 2174 aa1.97□□□□□ -2.09
CHD1-206ENST00000511067 AKAP12Q02952 1782 aa1.97□□□□□ -2.09
CHD1-206ENST00000511067 MED1Q15648 1581 aaPredicted RBP1.97□□□□□ -2.09
CHD1-206ENST00000511067 SAMD9LQ8IVG5 1584 aa1.97□□□□□ -2.09
CHD1-206ENST00000511067 ARHGEF28Q8N1W1 1705 aaKnown RBP1.97□□□□□ -2.09
CHD1-206ENST00000511067 EFCAB6Q5THR3 1501 aa1.96□□□□□ -2.09
CHD1-206ENST00000511067 CLTCQ00610 1675 aaKnown RBP1.96□□□□□ -2.1
CHD1-206ENST00000511067 PPLO60437 1756 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 TRAPPC2LH3BP13 241 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 LYPLA2O95372 231 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 TTRP02766 147 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 S100A6P06703 90 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 RPS17P08708 135 aaKnown RBP1.96□□□□□ -2.1
CHD1-206ENST00000511067 METTL15P1P0C7V9 234 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 HIST1H2BOP23527 126 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 HIST1H2BBP33778 126 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 CDKN2CP42773 168 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 ZNF80P51504 273 aaPredicted RBP1.96□□□□□ -2.1
CHD1-206ENST00000511067 HIST1H2BDP58876 126 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 HIST1H2BCP62807 126 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 HIST2H2BEQ16778 126 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.96□□□□□ -2.1
CHD1-206ENST00000511067 AADACL3Q5VUY0 350 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 RASSF5Q8WWW0 418 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 C11orf40Q8WZ69 217 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 HIST1H2BHQ93079 126 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 PPP1R14BQ96C90 147 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 HIST1H2BNQ99877 126 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 HIST1H2BMQ99879 126 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 NIPSNAP1Q9BPW8 284 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.96□□□□□ -2.1
CHD1-206ENST00000511067 ABCA8O94911 1581 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 PARP4Q9UKK3 1724 aaKnown RBP1.96□□□□□ -2.1
CHD1-206ENST00000511067 NUP155O75694 1391 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 ANKRD36BQ8N2N9 1353 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 ABCC3O15438 1527 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 TRPM2O94759 1503 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 ABCC6O95255 1503 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 LRRC7Q96NW7 1537 aa1.96□□□□□ -2.1
CHD1-206ENST00000511067 DLG5Q8TDM6 1919 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 CASZ1Q86V15 1759 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 LRRC37A3O60309 1634 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 CAMSAP1Q5T5Y3 1602 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 MAP3K4Q9Y6R4 1608 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 ERCC6Q03468 1493 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 RP1L1Q8IWN7 2480 aaPredicted RBP1.95□□□□□ -2.1
CHD1-206ENST00000511067 MICAL3Q7RTP6 2002 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 XRN1Q8IZH2 1706 aaKnown RBP1.95□□□□□ -2.1
CHD1-206ENST00000511067 NRKQ7Z2Y5 1582 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 ERBINQ96RT1 1412 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 ORC5O43913 435 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 GPX2P18283 190 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 HBA1P69905 142 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 AESQ08117 197 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 STX5Q13190 355 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 C7orf65Q6ZTY9 151 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 DHFR2Q86XF0 187 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 ZNF565Q8N9K5 539 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 OR8B3Q8NGG8 313 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 MCFD2Q8NI22 146 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 MBD3L1Q8WWY6 194 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 FBXL12Q9NXK8 326 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.95□□□□□ -2.1
CHD1-206ENST00000511067 TOPBP1Q92547 1522 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 TCHHQ07283 1943 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 ZCCHC11Q5TAX3 1644 aaKnown RBP1.95□□□□□ -2.1
CHD1-206ENST00000511067 MROH1Q8NDA8 1641 aa1.95□□□□□ -2.1
CHD1-206ENST00000511067 CDK12Q9NYV4 1490 aaPredicted RBP1.94□□□□□ -2.1
CHD1-206ENST00000511067 HMCN1Q96RW7 5635 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 TET3O43151 1660 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 FAAHO00519 579 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 RPS4Y1P22090 263 aaKnown RBP1.94□□□□□ -2.1
CHD1-206ENST00000511067 MAGEA12P43365 314 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 RPL5P46777 297 aaKnown RBP1.94□□□□□ -2.1
CHD1-206ENST00000511067 LSM6P62312 80 aaKnown RBP1.94□□□□□ -2.1
CHD1-206ENST00000511067 MOGQ16653 247 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 Q1T7F1 81 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 ARHGAP11BQ3KRB8 267 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 LPCAT3Q6P1A2 487 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 C9orf163Q8N9P6 203 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 OR5B17Q8NGF7 314 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms