RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 GPER1Q99527 375 aa3.95□□□□□ -1.78
USP53-206ENST00000510737 TMEM70Q9BUB7 260 aa3.95□□□□□ -1.78
USP53-206ENST00000510737 C20orf24Q9BUV8 137 aa3.95□□□□□ -1.78
USP53-206ENST00000510737 RHPN1-AS1Q9BWJ2 59 aa3.95□□□□□ -1.78
USP53-206ENST00000510737 ZNF430Q9H8G1 570 aaPredicted RBP3.95□□□□□ -1.78
USP53-206ENST00000510737 ISG20L2Q9H9L3 353 aaKnown RBP3.95□□□□□ -1.78
USP53-206ENST00000510737 FAM212BQ9NTI7 297 aaPredicted RBP3.95□□□□□ -1.78
USP53-206ENST00000510737 IL36GQ9NZH8 169 aa3.95□□□□□ -1.78
USP53-206ENST00000510737 LRRC42Q9Y546 428 aa3.95□□□□□ -1.78
USP53-206ENST00000510737 IGLV11-55A0A075B6I3 123 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 A0A087WTM6 91 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 OR4C45A6NMZ5 311 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 CA11O75493 328 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 APOA2P02652 100 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 GSTT2P0CG29 244 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 GSTT2BP0CG30 244 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 AREGP15514 252 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 ATP6V1B2P21281 511 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 CEACAM6P40199 344 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 KRTAP10-10P60014 251 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 ZNF85Q03923 595 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 TTC32Q5I0X7 151 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 TLCD1Q96CP7 247 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 OR2A7Q96R45 310 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 MS4A6AQ9H2W1 248 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 SPACA1Q9HBV2 294 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 ZNF586Q9NXT0 402 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 SMPD3Q9NY59 655 aaPredicted RBP3.94□□□□□ -1.78
USP53-206ENST00000510737 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 GNG8Q9UK08 70 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 MGAT4AQ9UM21 535 aa3.94□□□□□ -1.78
USP53-206ENST00000510737 SAMHD1Q9Y3Z3 626 aaKnown RBP3.94□□□□□ -1.78
USP53-206ENST00000510737 IGHV3OR16-13A0A075B7E8 117 aa3.93□□□□□ -1.78
USP53-206ENST00000510737 IGHV3-74A0A0B4J1X5 117 aa3.93□□□□□ -1.78
USP53-206ENST00000510737 IGHV7-4-1A0A0J9YVY3 117 aa3.93□□□□□ -1.78
USP53-206ENST00000510737 FOXI3A8MTJ6 420 aaPredicted RBP3.93□□□□□ -1.78
USP53-206ENST00000510737 E5RGE8 158 aa3.93□□□□□ -1.78
USP53-206ENST00000510737 M0R129 80 aa3.93□□□□□ -1.78
USP53-206ENST00000510737 M0R1X1 148 aa3.93□□□□□ -1.78
USP53-206ENST00000510737 NDUFA4O00483 81 aa3.93□□□□□ -1.78
USP53-206ENST00000510737 GTF2F2P13984 249 aa3.93□□□□□ -1.78
USP53-206ENST00000510737 PTBP1P26599 531 aaKnown RBP eCLIP3.93□□□□□ -1.784e-6■■■■□ 21.1
USP53-206ENST00000510737 PSME3P61289 254 aa3.93□□□□□ -1.78
USP53-206ENST00000510737 TMEM69Q5SWH9 247 aa3.93□□□□□ -1.78
USP53-206ENST00000510737 ZNF705AQ6ZN79 300 aaPredicted RBP3.93□□□□□ -1.78
USP53-206ENST00000510737 GIPC3Q8TF64 312 aa3.93□□□□□ -1.78
USP53-206ENST00000510737 PTX4Q96A99 478 aa3.93□□□□□ -1.78
USP53-206ENST00000510737 CXorf58Q96LI9 332 aa3.93□□□□□ -1.78
USP53-206ENST00000510737 ALKBH7Q9BT30 221 aaPredicted RBP3.93□□□□□ -1.78
USP53-206ENST00000510737 EFCAB1Q9HAE3 211 aa3.93□□□□□ -1.78
USP53-206ENST00000510737 OR1A1Q9P1Q5 309 aa3.93□□□□□ -1.78
USP53-206ENST00000510737 XCL2Q9UBD3 114 aa3.93□□□□□ -1.78
USP53-206ENST00000510737 NSG2Q9Y328 171 aa3.93□□□□□ -1.78
USP53-206ENST00000510737 TMEM189A5PLL7 270 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 OR2T8A6NH00 312 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 ZNF705FA8MVS1 300 aaPredicted RBP3.92□□□□□ -1.78
USP53-206ENST00000510737 NDUFAB1O14561 156 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 PRAF2O60831 178 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 GLAP06280 429 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 ZNF735P0CB33 412 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 ZNF705DP0CH99 300 aaPredicted RBP3.92□□□□□ -1.78
USP53-206ENST00000510737 ZNF705BP0CI00 300 aaPredicted RBP3.92□□□□□ -1.78
USP53-206ENST00000510737 COX4I1P13073 169 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 HIST1H1BP16401 226 aaKnown RBP3.92□□□□□ -1.78
USP53-206ENST00000510737 RAB3AP20336 220 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 OR2B8PP59922 312 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 PAFAH1B2P68402 229 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 VMA21Q3ZAQ7 101 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 ACTL10Q5JWF8 245 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 UBE2UQ5VVX9 321 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 NXNL2Q5VZ03 156 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 OR2T5Q6IEZ7 315 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 HACD2Q6Y1H2 254 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 TCF24Q7RTU0 167 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 OR10H4Q8NGA5 316 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 OR2T29Q8NH02 315 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 C5orf30Q96GV9 206 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 NSMCE2Q96MF7 247 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 IL4I1Q96RQ9 567 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 REEP1Q9H902 201 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 ABRACLQ9P1F3 81 aa3.92□□□□□ -1.78
USP53-206ENST00000510737 SMIM9A6NGZ8 99 aa3.91□□□□□ -1.78
USP53-206ENST00000510737 DNASE2O00115 360 aaPredicted RBP3.91□□□□□ -1.78
USP53-206ENST00000510737 EDF1O60869 148 aaKnown RBP3.91□□□□□ -1.78
USP53-206ENST00000510737 ZNF780AO75290 641 aaPredicted RBP3.91□□□□□ -1.78
USP53-206ENST00000510737 SAA1P0DJI8 122 aaPredicted RBP3.91□□□□□ -1.78
USP53-206ENST00000510737 ZNF93P35789 620 aaPredicted RBP3.91□□□□□ -1.78
USP53-206ENST00000510737 SNRPGP62308 76 aaKnown RBP3.91□□□□□ -1.78
USP53-206ENST00000510737 CDK10Q15131 360 aa3.91□□□□□ -1.78
USP53-206ENST00000510737 ESRGQ1W209 222 aa3.91□□□□□ -1.78
USP53-206ENST00000510737 ZNF880Q6PDB4 577 aa3.91□□□□□ -1.78
USP53-206ENST00000510737 CROCCP2Q86T23 111 aa3.91□□□□□ -1.78
USP53-206ENST00000510737 HS3ST5Q8IZT8 346 aa3.91□□□□□ -1.78
USP53-206ENST00000510737 CPNE2Q96FN4 548 aaPredicted RBP3.91□□□□□ -1.78
USP53-206ENST00000510737 RAB40CQ96S21 281 aa3.91□□□□□ -1.78
USP53-206ENST00000510737 S100A13Q99584 98 aa3.91□□□□□ -1.78
USP53-206ENST00000510737 UPK3BQ9BT76 320 aa3.91□□□□□ -1.78
USP53-206ENST00000510737 FAAP24Q9BTP7 215 aa3.91□□□□□ -1.78
USP53-206ENST00000510737 PAXXQ9BUH6 204 aa3.91□□□□□ -1.78
USP53-206ENST00000510737 BANF2Q9H503 90 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms