RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 FAUP35544 74 aaKnown RBP13.85□□□□□ -0.19
LSM6-206ENST00000510331 OPRK1P41145 380 aa13.85□□□□□ -0.19
LSM6-206ENST00000510331 ANKRD55Q3KP44 614 aa13.85□□□□□ -0.19
LSM6-206ENST00000510331 DUSP18Q8NEJ0 188 aa13.85□□□□□ -0.19
LSM6-206ENST00000510331 OR52E5Q8NH55 327 aa13.85□□□□□ -0.19
LSM6-206ENST00000510331 IL22RA2Q969J5 263 aa13.85□□□□□ -0.19
LSM6-206ENST00000510331 UBQLN2Q9UHD9 624 aa13.85□□□□□ -0.19
LSM6-206ENST00000510331 CSMD3Q7Z407 3707 aa13.85□□□□□ -0.19
LSM6-206ENST00000510331 IGHV3OR16-13A0A075B7E8 117 aa13.84□□□□□ -0.19
LSM6-206ENST00000510331 IGHV3-74A0A0B4J1X5 117 aa13.84□□□□□ -0.19
LSM6-206ENST00000510331 ZNF701M0R085 212 aaPredicted RBP13.84□□□□□ -0.19
LSM6-206ENST00000510331 NPBWR1P48145 328 aa13.84□□□□□ -0.19
LSM6-206ENST00000510331 SUB1P53999 127 aaKnown RBP eCLIP13.84□□□□□ -0.19
LSM6-206ENST00000510331 AP3S2P59780 193 aa13.84□□□□□ -0.19
LSM6-206ENST00000510331 ODF3L2Q3SX64 289 aa13.84□□□□□ -0.19
LSM6-206ENST00000510331 TMED4Q7Z7H5 227 aa13.84□□□□□ -0.19
LSM6-206ENST00000510331 SCGB3A2Q96PL1 93 aa13.84□□□□□ -0.19
LSM6-206ENST00000510331 RNF2Q99496 336 aa13.84□□□□□ -0.19
LSM6-206ENST00000510331 ZFAND3Q9H8U3 227 aa13.84□□□□□ -0.19
LSM6-206ENST00000510331 SMPXQ9UHP9 88 aa13.84□□□□□ -0.19
LSM6-206ENST00000510331 CEBPZOSA8MTT3 80 aa13.83□□□□□ -0.2
LSM6-206ENST00000510331 CHEK1O14757 476 aa13.83□□□□□ -0.2
LSM6-206ENST00000510331 SULT1A3P0DMM9 295 aa13.83□□□□□ -0.2
LSM6-206ENST00000510331 SULT1A4P0DMN0 295 aa13.83□□□□□ -0.2
LSM6-206ENST00000510331 MLANAQ16655 118 aa13.83□□□□□ -0.2
LSM6-206ENST00000510331 NMSQ5H8A3 153 aa13.83□□□□□ -0.2
LSM6-206ENST00000510331 TOMM20LQ6UXN7 152 aa13.83□□□□□ -0.2
LSM6-206ENST00000510331 TMEM116Q8NCL8 245 aa13.83□□□□□ -0.2
LSM6-206ENST00000510331 SLC24A4Q8NFF2 622 aa13.83□□□□□ -0.2
LSM6-206ENST00000510331 TMEM170AQ8WVE7 144 aa13.83□□□□□ -0.2
LSM6-206ENST00000510331 RHPN1-AS1Q9BWJ2 59 aa13.83□□□□□ -0.2
LSM6-206ENST00000510331 SRRQ9GZT4 340 aa13.83□□□□□ -0.2
LSM6-206ENST00000510331 HEYLQ9NQ87 328 aaPredicted RBP13.83□□□□□ -0.2
LSM6-206ENST00000510331 PUS1Q9Y606 427 aaKnown RBP eCLIP13.83□□□□□ -0.2
LSM6-206ENST00000510331 DYNC2H1Q8NCM8 4307 aaKnown RBP13.83□□□□□ -0.2
LSM6-206ENST00000510331 A0A1B0GU03 582 aa13.82□□□□□ -0.2
LSM6-206ENST00000510331 HTR2BP41595 481 aa13.82□□□□□ -0.2
LSM6-206ENST00000510331 CASC10Q5T4H9 136 aa13.82□□□□□ -0.2
LSM6-206ENST00000510331 LAMTOR1Q6IAA8 161 aa13.82□□□□□ -0.2
LSM6-206ENST00000510331 LYZL2Q7Z4W2 148 aa13.82□□□□□ -0.2
LSM6-206ENST00000510331 GGTLC1Q9BX51 225 aa13.82□□□□□ -0.2
LSM6-206ENST00000510331 KCNIP3Q9Y2W7 256 aa13.82□□□□□ -0.2
LSM6-206ENST00000510331 A0A0B4J2A0 478 aa13.81□□□□□ -0.2
LSM6-206ENST00000510331 CLN5O75503 358 aa13.81□□□□□ -0.2
LSM6-206ENST00000510331 TMEM50AO95807 157 aa13.81□□□□□ -0.2
LSM6-206ENST00000510331 SPANXN2Q5MJ10 180 aa13.81□□□□□ -0.2
LSM6-206ENST00000510331 ZNF600Q6ZNG1 722 aa13.81□□□□□ -0.2
LSM6-206ENST00000510331 GINS3Q9BRX5 216 aa13.81□□□□□ -0.2
LSM6-206ENST00000510331 SHPKQ9UHJ6 478 aa13.81□□□□□ -0.2
LSM6-206ENST00000510331 RYR2Q92736 4967 aa13.81□□□□□ -0.2
LSM6-206ENST00000510331 IGKV3-7A0A075B6H7 116 aa13.8□□□□□ -0.2
LSM6-206ENST00000510331 TRAV14DV4A0A0A6YYC5 116 aa13.8□□□□□ -0.2
LSM6-206ENST00000510331 IGHV3-66A0A0C4DH42 116 aa13.8□□□□□ -0.2
LSM6-206ENST00000510331 OR4C46A6NHA9 309 aa13.8□□□□□ -0.2
LSM6-206ENST00000510331 APOHP02749 345 aaPredicted RBP13.8□□□□□ -0.2
LSM6-206ENST00000510331 ANXA3P12429 323 aa13.8□□□□□ -0.2
LSM6-206ENST00000510331 SRPXP78539 464 aa13.8□□□□□ -0.2
LSM6-206ENST00000510331 SMCO1Q147U7 214 aa13.8□□□□□ -0.2
LSM6-206ENST00000510331 C2orf83Q53S99 150 aa13.8□□□□□ -0.2
LSM6-206ENST00000510331 ZFAND6Q6FIF0 208 aa13.8□□□□□ -0.2
LSM6-206ENST00000510331 LGI3Q8N145 548 aa13.8□□□□□ -0.2
LSM6-206ENST00000510331 OR4X1Q8NH49 305 aa13.8□□□□□ -0.2
LSM6-206ENST00000510331 ST8SIA2Q92186 375 aa13.8□□□□□ -0.2
LSM6-206ENST00000510331 LOC102724200A0A096LPH7 203 aaPredicted RBP13.79□□□□□ -0.2
LSM6-206ENST00000510331 LYL1P12980 280 aa13.79□□□□□ -0.2
LSM6-206ENST00000510331 VAMP1P23763 118 aa13.79□□□□□ -0.2
LSM6-206ENST00000510331 NPY1RP25929 384 aa13.79□□□□□ -0.2
LSM6-206ENST00000510331 TFPI2P48307 235 aa13.79□□□□□ -0.2
LSM6-206ENST00000510331 CCR6P51684 374 aa13.79□□□□□ -0.2
LSM6-206ENST00000510331 TNFRSF9Q07011 255 aa13.79□□□□□ -0.2
LSM6-206ENST00000510331 TIGITQ495A1 244 aa13.79□□□□□ -0.2
LSM6-206ENST00000510331 HSPB7Q9UBY9 170 aa13.79□□□□□ -0.2
LSM6-206ENST00000510331 RPS10-NUDT3A0A1W2PQS6 291 aa13.78□□□□□ -0.2
LSM6-206ENST00000510331 IGKV1-17P01599 117 aa13.78□□□□□ -0.2
LSM6-206ENST00000510331 RND2P52198 227 aa13.78□□□□□ -0.2
LSM6-206ENST00000510331 TMEM128Q5BJH2 165 aa13.78□□□□□ -0.2
LSM6-206ENST00000510331 PRSS54Q6PEW0 395 aa13.78□□□□□ -0.2
LSM6-206ENST00000510331 DEDD2Q8WXF8 326 aa13.78□□□□□ -0.2
LSM6-206ENST00000510331 RBKSQ9H477 322 aa13.78□□□□□ -0.2
LSM6-206ENST00000510331 PPP1R1AQ13522 171 aa13.77□□□□□ -0.21
LSM6-206ENST00000510331 ZNF124Q15973 351 aa13.77□□□□□ -0.21
LSM6-206ENST00000510331 BAK1Q16611 211 aa13.77□□□□□ -0.21
LSM6-206ENST00000510331 FAM90A2PQ658T7 463 aa13.77□□□□□ -0.21
LSM6-206ENST00000510331 TCF24Q7RTU0 167 aa13.77□□□□□ -0.21
LSM6-206ENST00000510331 LILRB2Q8N423 598 aa13.77□□□□□ -0.21
LSM6-206ENST00000510331 GBGT1Q8N5D6 347 aa13.77□□□□□ -0.21
LSM6-206ENST00000510331 RNASEH2CQ8TDP1 164 aaKnown RBP13.77□□□□□ -0.21
LSM6-206ENST00000510331 DTD1Q8TEA8 209 aa13.77□□□□□ -0.21
LSM6-206ENST00000510331 SLC25A21Q9BQT8 299 aaPredicted RBP13.77□□□□□ -0.21
LSM6-206ENST00000510331 VSIRQ9H7M9 311 aa13.77□□□□□ -0.21
LSM6-206ENST00000510331 TENM2Q9NT68 2774 aa13.76□□□□□ -0.21
LSM6-206ENST00000510331 SCGB2A1O75556 95 aa13.76□□□□□ -0.21
LSM6-206ENST00000510331 IGLC1P0CG04 106 aa13.76□□□□□ -0.21
LSM6-206ENST00000510331 TRIQKQ629K1 86 aa13.76□□□□□ -0.21
LSM6-206ENST00000510331 APRG1Q8IVJ8 170 aa13.76□□□□□ -0.21
LSM6-206ENST00000510331 OR1S1Q8NH92 325 aa13.76□□□□□ -0.21
LSM6-206ENST00000510331 SDHCQ99643 169 aaPredicted RBP13.76□□□□□ -0.21
LSM6-206ENST00000510331 SACSQ9NZJ4 4579 aa13.76□□□□□ -0.21
LSM6-206ENST00000510331 DUXBA0A1W2PPF3 345 aa13.75□□□□□ -0.21
LSM6-206ENST00000510331 SFT2D2O95562 160 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms