RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 LY6G6FQ5SQ64 297 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 SAPCD1Q5SSQ6 148 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 OR10W1Q8NGF6 305 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 PSMG3Q9BT73 122 aaPredicted RBP4.14□□□□□ -1.75
PHF3-210ENST00000509876 DNAJC13O75165 2243 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 A0A0B4J293 547 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 A8MXK9 166 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 RPS10P46783 165 aaKnown RBP4.14□□□□□ -1.75
PHF3-210ENST00000509876 SUMO1P63165 101 aaKnown RBP4.14□□□□□ -1.75
PHF3-210ENST00000509876 IGHV3OR16-8A0A075B7F1 116 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 C20orf202A1L168 122 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 FSTL3O95633 263 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 ZFP36P26651 326 aaKnown RBP4.14□□□□□ -1.75
PHF3-210ENST00000509876 NDUFA6P56556 154 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 S100A12P80511 92 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 RUNX1Q01196 453 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 TMEM190Q8WZ59 177 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 CTDSP1Q9GZU7 261 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 DAZ1Q9NQZ3 744 aaKnown RBP4.14□□□□□ -1.75
PHF3-210ENST00000509876 ZNF581Q9P0T4 197 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 HSPB7Q9UBY9 170 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 BOLA1Q9Y3E2 137 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 CLPSL1A2RUU4 121 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 NPIPB5A8MRT5 1133 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 INAFM1C9JVW0 142 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 SFTA3P0C7M3 94 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 C10orf55Q5SWW7 151 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 Q6ZSR3 168 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 OR5AN1Q8NGI8 311 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 SGMS2Q8NHU3 365 aa4.14□□□□□ -1.75
PHF3-210ENST00000509876 BBC3Q96PG8 261 aaPredicted RBP4.14□□□□□ -1.75
PHF3-210ENST00000509876 TNRC6AQ8NDV7 1962 aaKnown RBP4.13□□□□□ -1.75
PHF3-210ENST00000509876 UBE2L6O14933 153 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 ARL14EPLP0DKL9 152 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 RELBQ01201 579 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 FOXE3Q13461 319 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 TEX261Q6UWH6 196 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 C1QTNF4Q9BXJ3 329 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 SLC35B3Q9H1N7 401 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 DGAT2L7PQ6IED9 249 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 LRTM2Q8N967 370 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 OR11H1Q8NG94 326 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 FREM3P0C091 2139 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 TNRC6BQ9UPQ9 1833 aaKnown RBP4.13□□□□□ -1.75
PHF3-210ENST00000509876 CBY3A6NI87 242 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 FOXI3A8MTJ6 420 aaPredicted RBP4.13□□□□□ -1.75
PHF3-210ENST00000509876 SYNJ2BPP57105 145 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 ZNRD1Q9P1U0 126 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 PSMG4Q5JS54 123 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 C9orf66Q5T8R8 295 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 LHFPL1Q86WI0 220 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 ZNF680Q8NEM1 530 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 NOL4LQ96MY1 436 aaPredicted RBP4.13□□□□□ -1.75
PHF3-210ENST00000509876 SIRPDQ9H106 197 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 PHLDA3Q9Y5J5 127 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 GVINP1Q7Z2Y8 2422 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 RAB5AP20339 215 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 URGCP-MRPS24S4R325 110 aa4.13□□□□□ -1.75
PHF3-210ENST00000509876 DNAJC9-AS1A6NH13 148 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 IGKV1-16P04430 117 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 CNTFRP26992 372 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 MFAP2P55001 183 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 SMUG1Q53HV7 270 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 ANAPC16Q96DE5 110 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 TRGV9Q99603 122 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 SDF2L1Q9HCN8 221 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 TOMM40O96008 361 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 SNRPCP09234 159 aaKnown RBP4.12□□□□□ -1.75
PHF3-210ENST00000509876 FCER1GP30273 86 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 TFF3Q07654 80 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 ICAM4Q14773 271 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 WDR73Q6P4I2 378 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 C1QL4Q86Z23 238 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 LHFPL5Q8TAF8 219 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 HIST1H2BAQ96A08 127 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 ST6GAL2Q96JF0 529 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 ZNF407Q9C0G0 2248 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 NBEAP1P0C6P0 100 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 Q8NFD4 153 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 ZMAT4Q9H898 229 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 OTORQ9NRC9 128 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 TRAV3A0A0B4J244 114 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 G3V3Q6 166 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 H3BTX0 84 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 GCHFRP30047 84 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 RNASE4P34096 147 aaKnown RBP4.12□□□□□ -1.75
PHF3-210ENST00000509876 RPL29P47914 159 aaKnown RBP4.12□□□□□ -1.75
PHF3-210ENST00000509876 APOC4P55056 127 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 DLX1P56177 255 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 PNRC1Q12796 327 aaPredicted RBP4.12□□□□□ -1.75
PHF3-210ENST00000509876 FA2HQ7L5A8 372 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 CIARTQ8N365 385 aaPredicted RBP4.12□□□□□ -1.75
PHF3-210ENST00000509876 TMSB15BA0A087X1C1 80 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 BCL2P10415 239 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 EMP1P54849 157 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 LMO4P61968 165 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 TWIST1Q15672 202 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 KLF17Q5JT82 389 aaPredicted RBP4.12□□□□□ -1.75
PHF3-210ENST00000509876 GOLT1AQ6ZVE7 132 aa4.12□□□□□ -1.75
PHF3-210ENST00000509876 OVOL3O00110 214 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms