RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 RALGAPA2Q2PPJ7 1873 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 TDRD15B5MCY1 1934 aaKnown RBP6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 MCM3APO60318 1980 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 TRBV6-6A0A0A6YYG2 114 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 RPP25Q9BUL9 199 aaKnown RBP6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 KLF12Q9Y4X4 402 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 URB1O60287 2271 aaKnown RBP6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 UBE2L6O14933 153 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 PRTN3P24158 256 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 LOXL3P58215 753 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 ZNF56Q15929 161 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 PVRIGQ6DKI7 326 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 GFRALQ6UXV0 394 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 STPG4Q8N801 248 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 OR13A1Q8NGR1 328 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 PPDPFLQ8WWR9 84 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 MOB4Q9Y3A3 225 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 ZNF638Q14966 1978 aaKnown RBP6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 TRAV8-1A0A0A6YYK1 113 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 FNDC10F2Z333 226 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 GATA2P23769 480 aaPredicted RBP6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 SRSF6Q13247 344 aaKnown RBP6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 LAGE3Q14657 143 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 C1orf53Q5VUE5 145 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 C18orf32Q8TCD1 76 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 CSTL1Q9H114 145 aa6.1□□□□□ -1.43
UBE2D3-224ENST00000508474 IGHV2-70DA0A0C4DH43 119 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 RAMP3O60896 148 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 FAM159AQ6UWV7 190 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 SP7Q8TDD2 431 aaPredicted RBP6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 R4GN57 208 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 PIKFYVEQ9Y2I7 2098 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 TRBV20-1A0A075B6N2 111 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 FAM106CPP0CH98 169 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 PAX1P15863 534 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 NPPCP23582 126 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 TMEM155Q4W5P6 130 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 GTSCR1Q86UQ5 136 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 VOPP1Q96AW1 172 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 SLC25A39Q9BZJ4 359 aaPredicted RBP6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 RFNGQ9Y644 331 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 IGHV3-72A0A0B4J1Y9 119 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 TRAV2A0A0B4J234 112 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 SIVA1O15304 175 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 GHRHP01286 108 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 COX8AP10176 69 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 PEAR1Q5VY43 1037 aaPredicted RBP6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 SLC22A18ASQ8N1D0 253 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 RNF182Q8N6D2 247 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 LEAP2Q969E1 77 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 HES7Q9BYE0 225 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 ZNF319Q9P2F9 582 aa6.09□□□□□ -1.43
UBE2D3-224ENST00000508474 COL5A3P25940 1745 aaPredicted RBP6.09□□□□□ -1.44
UBE2D3-224ENST00000508474 RBMY1BA6NDE4 496 aaKnown RBP6.09□□□□□ -1.44
UBE2D3-224ENST00000508474 RBMY1EA6NEQ0 496 aaKnown RBP6.09□□□□□ -1.44
UBE2D3-224ENST00000508474 CGB1A6NKQ9 187 aa6.09□□□□□ -1.44
UBE2D3-224ENST00000508474 IGKV1-5P01602 117 aa6.09□□□□□ -1.44
UBE2D3-224ENST00000508474 RBMY1DP0C7P1 496 aaKnown RBP6.09□□□□□ -1.44
UBE2D3-224ENST00000508474 RBMY1A1P0DJD3 496 aaKnown RBP6.09□□□□□ -1.44
UBE2D3-224ENST00000508474 RBMY1CP0DJD4 496 aa6.09□□□□□ -1.44
UBE2D3-224ENST00000508474 PYYP10082 97 aa6.09□□□□□ -1.44
UBE2D3-224ENST00000508474 AZU1P20160 251 aa6.09□□□□□ -1.44
UBE2D3-224ENST00000508474 DUTP33316 252 aaKnown RBP6.09□□□□□ -1.44
UBE2D3-224ENST00000508474 CLEC2AQ6UVW9 174 aa6.09□□□□□ -1.44
UBE2D3-224ENST00000508474 SFTA2Q6UW10 78 aa6.09□□□□□ -1.44
UBE2D3-224ENST00000508474 FOXA2Q9Y261 457 aaPredicted RBP6.09□□□□□ -1.44
UBE2D3-224ENST00000508474 TRIP12Q14669 1992 aaPredicted RBP6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 LOC285556D6RIA3 1793 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 IGLV3-32A0A0A0MS00 114 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 TGFBR3LH3BV60 316 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 TNFRSF6BO95407 300 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 WBP1Q96G27 269 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 SPAG8Q99932 426 aaPredicted RBP6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 PSME4Q14997 1843 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 A0A1W2PPM0 123 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 IGLC7A0M8Q6 106 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 PDLIM4P50479 330 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 SUMO2P61956 95 aaKnown RBP6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 CT83Q5H943 113 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 BVES-AS1Q5T3Y7 98 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 SLC50A1Q9BRV3 221 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 PGPEP1Q9NXJ5 209 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 CHD5Q8TDI0 1954 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 IQCF6A8MYZ5 107 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 D6R8Y8 96 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 M0R381 172 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 NPFFO15130 113 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 IGLL1P15814 213 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 ZNF562Q6V9R5 426 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 C8orf46Q8TAG6 207 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 EEF1AKMT3Q96AZ1 226 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 TMEM101Q96IK0 257 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 TMEM74BQ9NUR3 256 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 TMEM8BA6NDV4 472 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 PRR33A8MZF0 331 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 C5orf67F2Z3F1 127 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 IGHV3-48P01763 117 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 CRYGSP22914 178 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 S100A7L2Q5SY68 101 aa6.08□□□□□ -1.44
UBE2D3-224ENST00000508474 SHISA5Q8N114 240 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms