RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 ZFAND3Q9H8U3 227 aa10.57□□□□□ -0.72
RAB28-205ENST00000508274 BATF3Q9NR55 127 aa10.57□□□□□ -0.72
RAB28-205ENST00000508274 PRR13Q9NZ81 148 aa10.57□□□□□ -0.72
RAB28-205ENST00000508274 GPR132Q9UNW8 380 aa10.57□□□□□ -0.72
RAB28-205ENST00000508274 PUS1Q9Y606 427 aaKnown RBP eCLIP10.57□□□□□ -0.72
RAB28-205ENST00000508274 DNAH1Q9P2D7 4330 aa10.57□□□□□ -0.72
RAB28-205ENST00000508274 IGHV3-66A0A0C4DH42 116 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 ANKRD20A5PA0PJZ0 165 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 CRYM-AS1A6NIL9 109 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 B3GALNT1O75752 331 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 TMEM50AO95807 157 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 OPRK1P41145 380 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 NPBWR1P48145 328 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 FAM90A2PQ658T7 463 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 SELENOHQ8IZQ5 122 aaKnown RBP10.56□□□□□ -0.72
RAB28-205ENST00000508274 LILRB2Q8N423 598 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 ST8SIA2Q92186 375 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 RBPMSQ93062 196 aaKnown RBP10.56□□□□□ -0.72
RAB28-205ENST00000508274 BCL7BQ9BQE9 202 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 ENY2Q9NPA8 101 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 A0A1B0GU03 582 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 CORTO00230 105 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 NXPH3O95157 252 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 APOC4P55056 127 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 EWSR1Q01844 656 aaKnown RBP eCLIP10.56□□□□□ -0.72
RAB28-205ENST00000508274 SURF2Q15527 256 aaPredicted RBP10.56□□□□□ -0.72
RAB28-205ENST00000508274 BSXQ3C1V8 233 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 AARDQ4LEZ3 155 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 TMEM268Q5VZI3 342 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 ZNF600Q6ZNG1 722 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 FAM219AQ8IW50 185 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 TMEM230Q96A57 120 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 GPR146Q96CH1 333 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 GINS3Q9BRX5 216 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 CACNG5Q9UF02 275 aa10.56□□□□□ -0.72
RAB28-205ENST00000508274 GSTZ1O43708 216 aaPredicted RBP10.55□□□□□ -0.72
RAB28-205ENST00000508274 SUB1P53999 127 aaKnown RBP eCLIP10.55□□□□□ -0.72
RAB28-205ENST00000508274 SPCS3P61009 180 aa10.55□□□□□ -0.72
RAB28-205ENST00000508274 TCF24Q7RTU0 167 aa10.55□□□□□ -0.72
RAB28-205ENST00000508274 IL17DQ8TAD2 202 aa10.55□□□□□ -0.72
RAB28-205ENST00000508274 PRRT1Q99946 306 aa10.55□□□□□ -0.72
RAB28-205ENST00000508274 MAP6D1Q9H9H5 199 aa10.55□□□□□ -0.72
RAB28-205ENST00000508274 A0A0J9YWU9 116 aa10.54□□□□□ -0.72
RAB28-205ENST00000508274 SPRY2O43597 315 aa10.54□□□□□ -0.72
RAB28-205ENST00000508274 NOL3O60936 208 aaKnown RBP10.54□□□□□ -0.72
RAB28-205ENST00000508274 CLN5O75503 358 aa10.54□□□□□ -0.72
RAB28-205ENST00000508274 TNFSF8P32971 234 aa10.54□□□□□ -0.72
RAB28-205ENST00000508274 RPL5P46777 297 aaKnown RBP10.54□□□□□ -0.72
RAB28-205ENST00000508274 DHODHQ02127 395 aa10.54□□□□□ -0.72
RAB28-205ENST00000508274 Q6ZWC4 215 aa10.54□□□□□ -0.72
RAB28-205ENST00000508274 GALNT14Q96FL9 552 aa10.54□□□□□ -0.72
RAB28-205ENST00000508274 SOSTQ9BQB4 213 aa10.54□□□□□ -0.72
RAB28-205ENST00000508274 VSIRQ9H7M9 311 aa10.54□□□□□ -0.72
RAB28-205ENST00000508274 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.54□□□□□ -0.72
RAB28-205ENST00000508274 KIR2DL5BA0A0G2JN68 375 aa10.53□□□□□ -0.72
RAB28-205ENST00000508274 KIR2DL5BA0A0G2JPC4 375 aa10.53□□□□□ -0.72
RAB28-205ENST00000508274 DFFBO76075 338 aa10.53□□□□□ -0.72
RAB28-205ENST00000508274 TMEM187Q14656 261 aa10.53□□□□□ -0.72
RAB28-205ENST00000508274 LYG2Q86SG7 212 aa10.53□□□□□ -0.72
RAB28-205ENST00000508274 WFDC3Q8IUB2 231 aa10.53□□□□□ -0.72
RAB28-205ENST00000508274 KIR2DL5AQ8N109 375 aa10.53□□□□□ -0.72
RAB28-205ENST00000508274 OR4X1Q8NH49 305 aa10.53□□□□□ -0.72
RAB28-205ENST00000508274 KIR2DL5BQ8NHK3 375 aa10.53□□□□□ -0.72
RAB28-205ENST00000508274 MCUBQ9NWR8 336 aa10.53□□□□□ -0.72
RAB28-205ENST00000508274 RABL2AQ9UBK7 228 aaPredicted RBP10.53□□□□□ -0.72
RAB28-205ENST00000508274 RABL2BQ9UNT1 228 aa10.53□□□□□ -0.72
RAB28-205ENST00000508274 TP53TG1Q9Y2A0 90 aa10.53□□□□□ -0.72
RAB28-205ENST00000508274 FABP12A6NFH5 140 aa10.52□□□□□ -0.72
RAB28-205ENST00000508274 IGKV1-17P01599 117 aa10.52□□□□□ -0.72
RAB28-205ENST00000508274 BMI1P35226 326 aa10.52□□□□□ -0.72
RAB28-205ENST00000508274 TIGITQ495A1 244 aa10.52□□□□□ -0.72
RAB28-205ENST00000508274 FAM24BQ8N5W8 94 aa10.52□□□□□ -0.72
RAB28-205ENST00000508274 STPG3Q8N7X2 389 aa10.52□□□□□ -0.72
RAB28-205ENST00000508274 OR52E5Q8NH55 327 aa10.52□□□□□ -0.72
RAB28-205ENST00000508274 MCFD2Q8NI22 146 aa10.52□□□□□ -0.72
RAB28-205ENST00000508274 TMEM170AQ8WVE7 144 aa10.52□□□□□ -0.72
RAB28-205ENST00000508274 RNF183Q96D59 192 aa10.52□□□□□ -0.72
RAB28-205ENST00000508274 HEYLQ9NQ87 328 aaPredicted RBP10.52□□□□□ -0.72
RAB28-205ENST00000508274 RSL24D1Q9UHA3 163 aaKnown RBP10.52□□□□□ -0.72
RAB28-205ENST00000508274 TMEM56-RWDD3S4R434 201 aa10.52□□□□□ -0.72
RAB28-205ENST00000508274 CEBPZOSA8MTT3 80 aa10.52□□□□□ -0.73
RAB28-205ENST00000508274 UBE2CO00762 179 aa10.52□□□□□ -0.73
RAB28-205ENST00000508274 HTR2BP41595 481 aa10.52□□□□□ -0.73
RAB28-205ENST00000508274 SUPT4H1P63272 117 aaKnown RBP10.52□□□□□ -0.73
RAB28-205ENST00000508274 PMS2P11Q13670 270 aa10.52□□□□□ -0.73
RAB28-205ENST00000508274 SLC24A4Q8NFF2 622 aa10.52□□□□□ -0.73
RAB28-205ENST00000508274 MS4A6AQ9H2W1 248 aa10.52□□□□□ -0.73
RAB28-205ENST00000508274 SCP2D1Q9UJQ7 156 aa10.52□□□□□ -0.73
RAB28-205ENST00000508274 ALMS1Q8TCU4 4167 aa10.51□□□□□ -0.73
RAB28-205ENST00000508274 AGRNO00468 2067 aa10.51□□□□□ -0.73
RAB28-205ENST00000508274 EPPK1P58107 5090 aaKnown RBP10.51□□□□□ -0.73
RAB28-205ENST00000508274 AKR1C4P17516 323 aa10.51□□□□□ -0.73
RAB28-205ENST00000508274 RPL11P62913 178 aaKnown RBP10.51□□□□□ -0.73
RAB28-205ENST00000508274 TNFRSF9Q07011 255 aa10.51□□□□□ -0.73
RAB28-205ENST00000508274 C2orf83Q53S99 150 aa10.51□□□□□ -0.73
RAB28-205ENST00000508274 LEMD1Q68G75 181 aa10.51□□□□□ -0.73
RAB28-205ENST00000508274 PRSS54Q6PEW0 395 aa10.51□□□□□ -0.73
RAB28-205ENST00000508274 TRIM63Q969Q1 353 aa10.51□□□□□ -0.73
RAB28-205ENST00000508274 DNASE2O00115 360 aaPredicted RBP10.5□□□□□ -0.73
RAB28-205ENST00000508274 JTBO76095 146 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 185.1 ms