RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 MT-CO2P00403 227 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 PRB2P02812 416 aaPredicted RBP5.55□□□□□ -1.52
GYPB-206ENST00000506516 TCRBP04435 133 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 HOXB5P09067 269 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 SLC25A6P12236 298 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 ANXA7P20073 488 aaKnown RBP5.55□□□□□ -1.52
GYPB-206ENST00000506516 GPR183P32249 361 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 BTCP35070 178 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 NPBWR1P48145 328 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 MFAP2P55001 183 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 SRSF3P84103 164 aaKnown RBP5.55□□□□□ -1.52
GYPB-206ENST00000506516 DHRS2Q13268 280 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 DCTN2Q13561 401 aaKnown RBP5.55□□□□□ -1.52
GYPB-206ENST00000506516 ANKRD55Q3KP44 614 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 Q56UQ5 140 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 NMSQ5H8A3 153 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 DEFB121Q5J5C9 76 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 LYG2Q86SG7 212 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 DUSP18Q8NEJ0 188 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 MRAPQ8TCY5 172 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 SIGLEC8Q9NYZ4 499 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 FLVCR2Q9UPI3 526 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 U3KQ87 197 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 TRAV6A0A075B6T7 132 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 RPS10-NUDT3A0A1W2PQS6 291 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 FAM90A26D6RGX4 464 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 I3L2K1 104 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 K7EIM0 57 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 NUPL2O15504 423 aaKnown RBP5.54□□□□□ -1.52
GYPB-206ENST00000506516 GNG7O60262 68 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 SCGB2A1O75556 95 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 UPK1BO75841 260 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 NXPH3O95157 252 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 LY86O95711 162 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 IFNA10P01566 189 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 CSN3P07498 182 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 RNASE2P10153 161 aaKnown RBP5.54□□□□□ -1.52
GYPB-206ENST00000506516 FCGR2BP31994 310 aaPredicted RBP5.54□□□□□ -1.52
GYPB-206ENST00000506516 OPRK1P41145 380 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 ATP5IP56385 69 aaPredicted RBP5.54□□□□□ -1.52
GYPB-206ENST00000506516 RPP30P78346 268 aaKnown RBP5.54□□□□□ -1.52
GYPB-206ENST00000506516 RELQ04864 619 aaPredicted RBP5.54□□□□□ -1.52
GYPB-206ENST00000506516 TNFRSF9Q07011 255 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 C2orf83Q53S99 150 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 PVRIGQ6DKI7 326 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 DTD1Q8TEA8 209 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 C20orf85Q9H1P6 137 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 RBKSQ9H477 322 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 ZC4H2Q9NQZ6 224 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 HSPB7Q9UBY9 170 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 ZNF256Q9Y2P7 627 aaPredicted RBP5.54□□□□□ -1.52
GYPB-206ENST00000506516 UFC1Q9Y3C8 167 aa5.54□□□□□ -1.52
GYPB-206ENST00000506516 TRAV30A0A087WSZ9 112 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 WI2-2373I1.2A0A1W2PRP0 233 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 NDUFA4O00483 81 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 PITX3O75364 302 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 IGLV1-51P01701 117 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 CTSGP08311 255 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 FOLR2P14207 255 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 CBLN1P23435 193 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 ELLP55199 621 aaPredicted RBP5.53□□□□□ -1.52
GYPB-206ENST00000506516 DEFA1P59665 94 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 DEFA3P59666 94 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 RAB11AP62491 216 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 ASAH1Q13510 395 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 MLANAQ16655 118 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 BSXQ3C1V8 233 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 GGNBP1Q5YKI7 109 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 ETFRF1Q6IPR1 90 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 IL34Q6ZMJ4 242 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 SLC24A4Q8NFF2 622 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 OR2K2Q8NGT1 345 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 ENKURQ8TC29 256 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 RNASEH2CQ8TDP1 164 aaKnown RBP5.53□□□□□ -1.52
GYPB-206ENST00000506516 DYNLRB2Q8TF09 96 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 MITD1Q8WV92 249 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 MARC2Q969Z3 335 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 CIB3Q96Q77 187 aaPredicted RBP5.53□□□□□ -1.52
GYPB-206ENST00000506516 ZNF436Q9C0F3 470 aaPredicted RBP5.53□□□□□ -1.52
GYPB-206ENST00000506516 NUDT15Q9NV35 164 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 TECRQ9NZ01 308 aaKnown RBP5.53□□□□□ -1.52
GYPB-206ENST00000506516 MRPL27Q9P0M9 148 aaKnown RBP5.53□□□□□ -1.52
GYPB-206ENST00000506516 PLA2G2DQ9UNK4 145 aa5.53□□□□□ -1.52
GYPB-206ENST00000506516 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.53□□□□□ -1.52
GYPB-206ENST00000506516 WNK1Q9H4A3 2382 aa5.52□□□□□ -1.53
GYPB-206ENST00000506516 IGHV3-35A0A0C4DH35 117 aa5.52□□□□□ -1.53
GYPB-206ENST00000506516 C2orf70A6NJV1 201 aa5.52□□□□□ -1.53
GYPB-206ENST00000506516 WRBO00258 174 aa5.52□□□□□ -1.53
GYPB-206ENST00000506516 SYNGR2O43760 224 aa5.52□□□□□ -1.53
GYPB-206ENST00000506516 YIF1AO95070 293 aa5.52□□□□□ -1.53
GYPB-206ENST00000506516 TMEM50AO95807 157 aa5.52□□□□□ -1.53
GYPB-206ENST00000506516 IGHV3-48P01763 117 aa5.52□□□□□ -1.53
GYPB-206ENST00000506516 IFNA4P05014 189 aa5.52□□□□□ -1.53
GYPB-206ENST00000506516 SLC25A4P12235 298 aa5.52□□□□□ -1.53
GYPB-206ENST00000506516 GP9P14770 177 aa5.52□□□□□ -1.53
GYPB-206ENST00000506516 SPNP16150 400 aa5.52□□□□□ -1.53
GYPB-206ENST00000506516 NPY1RP25929 384 aa5.52□□□□□ -1.53
GYPB-206ENST00000506516 LCN12Q6JVE5 192 aa5.52□□□□□ -1.53
GYPB-206ENST00000506516 UXS1Q8NBZ7 420 aa5.52□□□□□ -1.53
GYPB-206ENST00000506516 OR52B4Q8NGK2 314 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms