RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 GALNT14Q96FL9 552 aa10.61□□□□□ -0.71
CDC42SE2-209ENST00000506419 TMEM222Q9H0R3 208 aa10.61□□□□□ -0.71
CDC42SE2-209ENST00000506419 VSIRQ9H7M9 311 aa10.61□□□□□ -0.71
CDC42SE2-209ENST00000506419 ZFAND3Q9H8U3 227 aa10.61□□□□□ -0.71
CDC42SE2-209ENST00000506419 PUS1Q9Y606 427 aaKnown RBP eCLIP10.61□□□□□ -0.71
CDC42SE2-209ENST00000506419 CTDSPLO15194 276 aa10.6□□□□□ -0.71
CDC42SE2-209ENST00000506419 DFFBO76075 338 aa10.6□□□□□ -0.71
CDC42SE2-209ENST00000506419 BMI1P35226 326 aa10.6□□□□□ -0.71
CDC42SE2-209ENST00000506419 MRPS10P82664 201 aaKnown RBP10.6□□□□□ -0.71
CDC42SE2-209ENST00000506419 SSBP1Q04837 148 aaKnown RBP10.6□□□□□ -0.71
CDC42SE2-209ENST00000506419 TNFRSF9Q07011 255 aa10.6□□□□□ -0.71
CDC42SE2-209ENST00000506419 ZNF600Q6ZNG1 722 aa10.6□□□□□ -0.71
CDC42SE2-209ENST00000506419 TCF24Q7RTU0 167 aa10.6□□□□□ -0.71
CDC42SE2-209ENST00000506419 LYG2Q86SG7 212 aa10.6□□□□□ -0.71
CDC42SE2-209ENST00000506419 STPG3Q8N7X2 389 aa10.6□□□□□ -0.71
CDC42SE2-209ENST00000506419 OR4C16Q8NGL9 310 aa10.6□□□□□ -0.71
CDC42SE2-209ENST00000506419 SMIM4Q8WVI0 70 aa10.6□□□□□ -0.71
CDC42SE2-209ENST00000506419 DIRAS2Q96HU8 199 aa10.6□□□□□ -0.71
CDC42SE2-209ENST00000506419 SOSTQ9BQB4 213 aa10.6□□□□□ -0.71
CDC42SE2-209ENST00000506419 NAA60Q9H7X0 242 aa10.6□□□□□ -0.71
CDC42SE2-209ENST00000506419 DISC1C4P0D8 188 aa10.59□□□□□ -0.71
CDC42SE2-209ENST00000506419 CLN5O75503 358 aa10.59□□□□□ -0.71
CDC42SE2-209ENST00000506419 B3GALNT1O75752 331 aa10.59□□□□□ -0.71
CDC42SE2-209ENST00000506419 RPL5P46777 297 aaKnown RBP10.59□□□□□ -0.71
CDC42SE2-209ENST00000506419 HOXA1P49639 335 aaPredicted RBP10.59□□□□□ -0.71
CDC42SE2-209ENST00000506419 SUB1P53999 127 aaKnown RBP eCLIP10.59□□□□□ -0.71
CDC42SE2-209ENST00000506419 SPCS3P61009 180 aa10.59□□□□□ -0.71
CDC42SE2-209ENST00000506419 MEF2DQ14814 521 aa10.59□□□□□ -0.71
CDC42SE2-209ENST00000506419 FAM24BQ8N5W8 94 aa10.59□□□□□ -0.71
CDC42SE2-209ENST00000506419 OR4X1Q8NH49 305 aa10.59□□□□□ -0.71
CDC42SE2-209ENST00000506419 OR52E5Q8NH55 327 aa10.59□□□□□ -0.71
CDC42SE2-209ENST00000506419 CSTL1Q9H114 145 aa10.59□□□□□ -0.71
CDC42SE2-209ENST00000506419 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.59□□□□□ -0.71
CDC42SE2-209ENST00000506419 CRYM-AS1A6NIL9 109 aa10.58□□□□□ -0.72
CDC42SE2-209ENST00000506419 JTBO76095 146 aa10.58□□□□□ -0.72
CDC42SE2-209ENST00000506419 IGKV1-17P01599 117 aa10.58□□□□□ -0.72
CDC42SE2-209ENST00000506419 AKAIN1P0CW23 69 aa10.58□□□□□ -0.72
CDC42SE2-209ENST00000506419 CMC4P56277 68 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE2-209ENST00000506419 DHODHQ02127 395 aa10.58□□□□□ -0.72
CDC42SE2-209ENST00000506419 IL18Q14116 193 aa10.58□□□□□ -0.72
CDC42SE2-209ENST00000506419 OR51S1Q8NGJ8 323 aa10.58□□□□□ -0.72
CDC42SE2-209ENST00000506419 TMEM170AQ8WVE7 144 aa10.58□□□□□ -0.72
CDC42SE2-209ENST00000506419 TMEM230Q96A57 120 aa10.58□□□□□ -0.72
CDC42SE2-209ENST00000506419 PDCD10Q9BUL8 212 aa10.58□□□□□ -0.72
CDC42SE2-209ENST00000506419 MS4A6AQ9H2W1 248 aa10.58□□□□□ -0.72
CDC42SE2-209ENST00000506419 ENY2Q9NPA8 101 aa10.58□□□□□ -0.72
CDC42SE2-209ENST00000506419 PRR13Q9NZ81 148 aa10.58□□□□□ -0.72
CDC42SE2-209ENST00000506419 C14orf166Q9Y224 244 aaKnown RBP10.58□□□□□ -0.72
CDC42SE2-209ENST00000506419 ANKRD20A5PA0PJZ0 165 aa10.57□□□□□ -0.72
CDC42SE2-209ENST00000506419 GSTZ1O43708 216 aaPredicted RBP10.57□□□□□ -0.72
CDC42SE2-209ENST00000506419 TMBIM6P55061 237 aa10.57□□□□□ -0.72
CDC42SE2-209ENST00000506419 PMS2P11Q13670 270 aa10.57□□□□□ -0.72
CDC42SE2-209ENST00000506419 SURF2Q15527 256 aaPredicted RBP10.57□□□□□ -0.72
CDC42SE2-209ENST00000506419 TIGITQ495A1 244 aa10.57□□□□□ -0.72
CDC42SE2-209ENST00000506419 TMEM268Q5VZI3 342 aa10.57□□□□□ -0.72
CDC42SE2-209ENST00000506419 FAM219AQ8IW50 185 aa10.57□□□□□ -0.72
CDC42SE2-209ENST00000506419 RAB2BQ8WUD1 216 aa10.57□□□□□ -0.72
CDC42SE2-209ENST00000506419 RBPMSQ93062 196 aaKnown RBP10.57□□□□□ -0.72
CDC42SE2-209ENST00000506419 GINS3Q9BRX5 216 aa10.57□□□□□ -0.72
CDC42SE2-209ENST00000506419 SLIRPQ9GZT3 109 aaKnown RBP10.57□□□□□ -0.72
CDC42SE2-209ENST00000506419 CCDC59Q9P031 241 aaKnown RBP10.57□□□□□ -0.72
CDC42SE2-209ENST00000506419 CACNG5Q9UF02 275 aa10.57□□□□□ -0.72
CDC42SE2-209ENST00000506419 TMEM56-RWDD3S4R434 201 aa10.57□□□□□ -0.72
CDC42SE2-209ENST00000506419 MPTX1A8MV57 137 aa10.56□□□□□ -0.72
CDC42SE2-209ENST00000506419 CORTO00230 105 aa10.56□□□□□ -0.72
CDC42SE2-209ENST00000506419 NPPCP23582 126 aa10.56□□□□□ -0.72
CDC42SE2-209ENST00000506419 TNFSF8P32971 234 aa10.56□□□□□ -0.72
CDC42SE2-209ENST00000506419 OPRK1P41145 380 aa10.56□□□□□ -0.72
CDC42SE2-209ENST00000506419 PAFAH1B2P68402 229 aa10.56□□□□□ -0.72
CDC42SE2-209ENST00000506419 TMEM187Q14656 261 aa10.56□□□□□ -0.72
CDC42SE2-209ENST00000506419 PRSS54Q6PEW0 395 aa10.56□□□□□ -0.72
CDC42SE2-209ENST00000506419 RNASE11Q8TAA1 199 aaKnown RBP10.56□□□□□ -0.72
CDC42SE2-209ENST00000506419 CXorf65A6NEN9 183 aa10.55□□□□□ -0.72
CDC42SE2-209ENST00000506419 DNASE2O00115 360 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE2-209ENST00000506419 NXPH3O95157 252 aa10.55□□□□□ -0.72
CDC42SE2-209ENST00000506419 CD5P06127 495 aa10.55□□□□□ -0.72
CDC42SE2-209ENST00000506419 CRYBB3P26998 211 aa10.55□□□□□ -0.72
CDC42SE2-209ENST00000506419 HTR2BP41595 481 aa10.55□□□□□ -0.72
CDC42SE2-209ENST00000506419 DEFB131AP59861 70 aa10.55□□□□□ -0.72
CDC42SE2-209ENST00000506419 RBMS2Q15434 407 aaKnown RBP10.55□□□□□ -0.72
CDC42SE2-209ENST00000506419 C2orf83Q53S99 150 aa10.55□□□□□ -0.72
CDC42SE2-209ENST00000506419 LEMD1Q68G75 181 aa10.55□□□□□ -0.72
CDC42SE2-209ENST00000506419 CEMP1Q6PRD7 247 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE2-209ENST00000506419 BCL7BQ9BQE9 202 aa10.55□□□□□ -0.72
CDC42SE2-209ENST00000506419 C6orf62Q9GZU0 229 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE2-209ENST00000506419 HEYLQ9NQ87 328 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE2-209ENST00000506419 U3KQE9 123 aa10.55□□□□□ -0.72
CDC42SE2-209ENST00000506419 H3BMQ9 156 aa10.54□□□□□ -0.72
CDC42SE2-209ENST00000506419 IGLC1P0CG04 106 aa10.54□□□□□ -0.72
CDC42SE2-209ENST00000506419 ATF4P18848 351 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE2-209ENST00000506419 RPL11P62913 178 aaKnown RBP10.54□□□□□ -0.72
CDC42SE2-209ENST00000506419 SUPT4H1P63272 117 aaKnown RBP10.54□□□□□ -0.72
CDC42SE2-209ENST00000506419 PRRT1Q99946 306 aa10.54□□□□□ -0.72
CDC42SE2-209ENST00000506419 RABL2AQ9UBK7 228 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE2-209ENST00000506419 RSL24D1Q9UHA3 163 aaKnown RBP10.54□□□□□ -0.72
CDC42SE2-209ENST00000506419 RABL2BQ9UNT1 228 aa10.54□□□□□ -0.72
CDC42SE2-209ENST00000506419 FRAS1Q86XX4 4008 aa10.54□□□□□ -0.72
CDC42SE2-209ENST00000506419 TRAV2A0A0B4J234 112 aa10.53□□□□□ -0.72
CDC42SE2-209ENST00000506419 FABP12A6NFH5 140 aa10.53□□□□□ -0.72
CDC42SE2-209ENST00000506419 CEBPZOSA8MTT3 80 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms