RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 RND3P61587 244 aa15.33■□□□□ 0.04
SQSTM1-210ENST00000506042 PVRIGQ6DKI7 326 aa15.33■□□□□ 0.04
SQSTM1-210ENST00000506042 TRPT1Q86TN4 253 aaKnown RBP15.33■□□□□ 0.04
SQSTM1-210ENST00000506042 ARRDC1Q8N5I2 433 aa15.33■□□□□ 0.04
SQSTM1-210ENST00000506042 Q8NAQ8 132 aa15.33■□□□□ 0.04
SQSTM1-210ENST00000506042 OR4X1Q8NH49 305 aa15.33■□□□□ 0.04
SQSTM1-210ENST00000506042 C15orf40Q8WUR7 153 aa15.33■□□□□ 0.04
SQSTM1-210ENST00000506042 RNF126Q9BV68 326 aa15.33■□□□□ 0.04
SQSTM1-210ENST00000506042 COMMD3Q9UBI1 195 aa15.33■□□□□ 0.04
SQSTM1-210ENST00000506042 APLNQ9ULZ1 77 aa15.33■□□□□ 0.04
SQSTM1-210ENST00000506042 K7EQG2 157 aa15.32■□□□□ 0.04
SQSTM1-210ENST00000506042 GSTZ1O43708 216 aaPredicted RBP15.32■□□□□ 0.04
SQSTM1-210ENST00000506042 P0DMU3 169 aa15.32■□□□□ 0.04
SQSTM1-210ENST00000506042 FAM231AP0DMU4 169 aa15.32■□□□□ 0.04
SQSTM1-210ENST00000506042 FAM231CP0DMU5 169 aa15.32■□□□□ 0.04
SQSTM1-210ENST00000506042 TBPP20226 339 aa15.32■□□□□ 0.04
SQSTM1-210ENST00000506042 CRYBB3P26998 211 aa15.32■□□□□ 0.04
SQSTM1-210ENST00000506042 RPL5P46777 297 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-210ENST00000506042 MZT2AQ6P582 158 aa15.32■□□□□ 0.04
SQSTM1-210ENST00000506042 NOXA1Q86UR1 476 aa15.32■□□□□ 0.04
SQSTM1-210ENST00000506042 SNX29P2Q8IUI4 249 aa15.32■□□□□ 0.04
SQSTM1-210ENST00000506042 Q8WTZ3 238 aa15.32■□□□□ 0.04
SQSTM1-210ENST00000506042 ZNF688P0C7X2 276 aa15.31■□□□□ 0.04
SQSTM1-210ENST00000506042 NUP62P37198 522 aaPredicted RBP15.31■□□□□ 0.04
SQSTM1-210ENST00000506042 HTR2BP41595 481 aa15.31■□□□□ 0.04
SQSTM1-210ENST00000506042 PIGPP57054 158 aa15.31■□□□□ 0.04
SQSTM1-210ENST00000506042 ETFRF1Q6IPR1 90 aa15.31■□□□□ 0.04
SQSTM1-210ENST00000506042 FAM219AQ8IW50 185 aa15.31■□□□□ 0.04
SQSTM1-210ENST00000506042 PLECQ15149 4684 aaKnown RBP15.3■□□□□ 0.04
SQSTM1-210ENST00000506042 IGHV4-4A0A075B6R2 117 aa15.3■□□□□ 0.04
SQSTM1-210ENST00000506042 C3orf85A0A1B0GTC6 90 aa15.3■□□□□ 0.04
SQSTM1-210ENST00000506042 ZNF705EA8MWA4 302 aaPredicted RBP15.3■□□□□ 0.04
SQSTM1-210ENST00000506042 IGKV1-39P01597 117 aa15.3■□□□□ 0.04
SQSTM1-210ENST00000506042 APOHP02749 345 aaPredicted RBP15.3■□□□□ 0.04
SQSTM1-210ENST00000506042 IGKV1D-39P04432 117 aa15.3■□□□□ 0.04
SQSTM1-210ENST00000506042 SLC25A4P12235 298 aa15.3■□□□□ 0.04
SQSTM1-210ENST00000506042 DHRS2Q13268 280 aa15.3■□□□□ 0.04
SQSTM1-210ENST00000506042 SPINK9Q5DT21 86 aa15.3■□□□□ 0.04
SQSTM1-210ENST00000506042 ACTL10Q5JWF8 245 aa15.3■□□□□ 0.04
SQSTM1-210ENST00000506042 AP3S1Q92572 193 aa15.3■□□□□ 0.04
SQSTM1-210ENST00000506042 A0A087WXM4 84 aa15.29■□□□□ 0.04
SQSTM1-210ENST00000506042 A0A1B0GU03 582 aa15.29■□□□□ 0.04
SQSTM1-210ENST00000506042 LSM3P62310 102 aaKnown RBP15.29■□□□□ 0.04
SQSTM1-210ENST00000506042 OR1S2Q8NGQ3 325 aa15.29■□□□□ 0.04
SQSTM1-210ENST00000506042 NDUFAF3Q9BU61 184 aa15.29■□□□□ 0.04
SQSTM1-210ENST00000506042 FAM25AB3EWG3 89 aa15.28■□□□□ 0.04
SQSTM1-210ENST00000506042 FAM25CB3EWG5 89 aa15.28■□□□□ 0.04
SQSTM1-210ENST00000506042 FAM25GB3EWG6 89 aa15.28■□□□□ 0.04
SQSTM1-210ENST00000506042 HNRNPCP07910 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
SQSTM1-210ENST00000506042 RNASE2P10153 161 aaKnown RBP15.28■□□□□ 0.04
SQSTM1-210ENST00000506042 SPCS3P61009 180 aa15.28■□□□□ 0.04
SQSTM1-210ENST00000506042 SEPSECSQ9HD40 501 aaKnown RBP15.28■□□□□ 0.04
SQSTM1-210ENST00000506042 HEYLQ9NQ87 328 aaPredicted RBP15.28■□□□□ 0.04
SQSTM1-210ENST00000506042 DEFB131BA0A096LNP1 70 aa15.27■□□□□ 0.04
SQSTM1-210ENST00000506042 TEX48A0A1B0GUV7 120 aa15.27■□□□□ 0.04
SQSTM1-210ENST00000506042 TMEM189A5PLL7 270 aa15.27■□□□□ 0.04
SQSTM1-210ENST00000506042 TNFAIP8O95379 198 aa15.27■□□□□ 0.04
SQSTM1-210ENST00000506042 AMBPP02760 352 aa15.27■□□□□ 0.04
SQSTM1-210ENST00000506042 ETV6P41212 452 aa15.27■□□□□ 0.04
SQSTM1-210ENST00000506042 PRR20EP86478 221 aa15.27■□□□□ 0.04
SQSTM1-210ENST00000506042 PRR20CP86479 221 aa15.27■□□□□ 0.04
SQSTM1-210ENST00000506042 PRR20DP86480 221 aa15.27■□□□□ 0.04
SQSTM1-210ENST00000506042 PRR20BP86481 221 aa15.27■□□□□ 0.04
SQSTM1-210ENST00000506042 PRR20AP86496 221 aa15.27■□□□□ 0.04
SQSTM1-210ENST00000506042 Q6ZTC4 211 aa15.27■□□□□ 0.04
SQSTM1-210ENST00000506042 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.27■□□□□ 0.04
SQSTM1-210ENST00000506042 M0QYG6 137 aa15.26■□□□□ 0.03
SQSTM1-210ENST00000506042 RBMY1A1P0DJD3 496 aaKnown RBP15.26■□□□□ 0.03
SQSTM1-210ENST00000506042 RBMY1CP0DJD4 496 aa15.26■□□□□ 0.03
SQSTM1-210ENST00000506042 RBMY1FQ15415 496 aaKnown RBP15.26■□□□□ 0.03
SQSTM1-210ENST00000506042 PSMG4Q5JS54 123 aa15.26■□□□□ 0.03
SQSTM1-210ENST00000506042 LILRB2Q8N423 598 aa15.26■□□□□ 0.03
SQSTM1-210ENST00000506042 FAM24BQ8N5W8 94 aa15.26■□□□□ 0.03
SQSTM1-210ENST00000506042 RNASEH2CQ8TDP1 164 aaKnown RBP15.26■□□□□ 0.03
SQSTM1-210ENST00000506042 KRTAP17-1Q9BYP8 105 aa15.26■□□□□ 0.03
SQSTM1-210ENST00000506042 C14orf166Q9Y224 244 aaKnown RBP15.26■□□□□ 0.03
SQSTM1-210ENST00000506042 A0A0B4J293 547 aa15.25■□□□□ 0.03
SQSTM1-210ENST00000506042 KNCNA6PVL3 124 aa15.25■□□□□ 0.03
SQSTM1-210ENST00000506042 IGKV1-5P01602 117 aa15.25■□□□□ 0.03
SQSTM1-210ENST00000506042 RORCP51449 518 aa15.25■□□□□ 0.03
SQSTM1-210ENST00000506042 YPEL3P61236 119 aaPredicted RBP15.25■□□□□ 0.03
SQSTM1-210ENST00000506042 OR52E5Q8NH55 327 aa15.25■□□□□ 0.03
SQSTM1-210ENST00000506042 DCANP1Q8TF63 244 aa15.25■□□□□ 0.03
SQSTM1-210ENST00000506042 TP53RKQ96S44 253 aa15.25■□□□□ 0.03
SQSTM1-210ENST00000506042 IFNA21P01568 189 aa15.24■□□□□ 0.03
SQSTM1-210ENST00000506042 PPP5CP53041 499 aa15.24■□□□□ 0.03
SQSTM1-210ENST00000506042 IZUMO4Q1ZYL8 232 aa15.24■□□□□ 0.03
SQSTM1-210ENST00000506042 POM121L12Q8N7R1 296 aa15.24■□□□□ 0.03
SQSTM1-210ENST00000506042 YIPF6Q96EC8 236 aa15.24■□□□□ 0.03
SQSTM1-210ENST00000506042 RAB40CQ96S21 281 aa15.24■□□□□ 0.03
SQSTM1-210ENST00000506042 PI3P19957 117 aa15.23■□□□□ 0.03
SQSTM1-210ENST00000506042 C4BPBP20851 252 aa15.23■□□□□ 0.03
SQSTM1-210ENST00000506042 UCP1P25874 307 aa15.23■□□□□ 0.03
SQSTM1-210ENST00000506042 OR10J1P30954 320 aa15.23■□□□□ 0.03
SQSTM1-210ENST00000506042 TGFBR1P36897 503 aa15.23■□□□□ 0.03
SQSTM1-210ENST00000506042 TAS2R19P59542 299 aa15.23■□□□□ 0.03
SQSTM1-210ENST00000506042 TIGITQ495A1 244 aa15.23■□□□□ 0.03
SQSTM1-210ENST00000506042 SCGB2B2Q4G0G5 96 aa15.23■□□□□ 0.03
SQSTM1-210ENST00000506042 SOHLH1Q5JUK2 328 aa15.23■□□□□ 0.03
SQSTM1-210ENST00000506042 TERB2Q8NHR7 220 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms