RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 C19orf84I3L1E1 186 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 J3QRK9 145 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 PIRO00625 290 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 UBL3O95164 117 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 IFNA16P05015 189 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 CTSDP07339 412 aaPredicted RBP0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 RBP1P09455 135 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 MIFP14174 115 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 SPI1P17947 270 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 HIST1H1TP22492 207 aaPredicted RBP0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 RPL5P46777 297 aaKnown RBP0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 OMPP47874 163 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 YPEL3P61236 119 aaPredicted RBP0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 PDE6HQ13956 83 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 KISS1Q15726 138 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 ACOT6Q3I5F7 207 aaPredicted RBP0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 PTRHD1Q6GMV3 140 aaKnown RBP0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 ALKAL1Q6UXT8 129 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 Q6ZQT0 140 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 TMEM86BQ8N661 226 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 SIGLECL1Q8N7X8 197 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 TERB2Q8NHR7 220 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 C4orf3Q8WVX3 66 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 H1FXQ92522 213 aaKnown RBP0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 KLK6Q92876 244 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 BORCS7Q96B45 105 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 TSPAN32Q96QS1 320 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 C20orf27Q9GZN8 174 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 CCDC90BQ9GZT6 254 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 CMTM6Q9NX76 183 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 RASL12Q9NYN1 266 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 VPS29Q9UBQ0 182 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 ERGIC3Q9Y282 383 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 SLC35A3Q9Y2D2 325 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 ECM29Q5VYK3 1845 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 EML5Q05BV3 1969 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 SBF1O95248 1867 aa0.35□□□□□ -2.35
HMGB1P29-201ENST00000505659 PLXND1Q9Y4D7 1925 aa0.34□□□□□ -2.35
HMGB1P29-201ENST00000505659 TRAV1-1A0A0B4J248 108 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 C7orf71A4D174 169 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 OR4C46A6NHA9 309 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 C2orf70A6NJV1 201 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 CLDN24A6NM45 220 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 FAAHO00519 579 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 SULT1B1O43704 296 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 CHP2O43745 196 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 OR2T1O43869 369 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 SERPINA6P08185 405 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 CRYGAP11844 174 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 SSR2P43308 183 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 CDC42P60953 191 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 IMPG1Q17R60 797 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 OR6V1Q8N148 313 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 CLDN22Q8N7P3 220 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 Q8N814 137 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 TEX47Q8TBZ9 253 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 ZNF418Q8TF45 676 aaPredicted RBP0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 SFT2D1Q8WV19 159 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 ITFG2Q969R8 447 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 GPR146Q96CH1 333 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 ARL5BQ96KC2 179 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 CCDC42Q96M95 316 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 PPP1R2P1Q96PQ5 205 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 C11orf68Q9H3H3 251 aaKnown RBP0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 ACER3Q9NUN7 267 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 TP73-AS1Q9UF72 201 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 EPDR1Q9UM22 224 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 HS3ST2Q9Y278 367 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 SCN10AQ9Y5Y9 1956 aa0.34□□□□□ -2.36
HMGB1P29-201ENST00000505659 RTL1A6NKG5 1358 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 MTUS2Q5JR59 1369 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 SCN3AQ9NY46 2000 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 PEAK1Q9H792 1746 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 MYH7BA7E2Y1 1941 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 WRNQ14191 1432 aaPredicted RBP eCLIP0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 NCOA1Q15788 1441 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 TGIF2-C20orf24A0A0A6YYL0 155 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 TRAV12-1A0A0B4J245 112 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 TRAV26-2A0A0B4J265 109 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 BUB1B-PAK6H3BSN5 160 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 M0R2N4 97 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 NIPSNAP2O75323 286 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 RPP14O95059 124 aaKnown RBP0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 TTRP02766 147 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 SMIM10L2AP0DMW4 78 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 SMIM10L2BP0DMW5 78 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 MGST1P10620 155 aaKnown RBP0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 CASP1P29466 404 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 ZNF93P35789 620 aaPredicted RBP0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 ANP32AP39687 249 aaKnown RBP0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 AP3S2P59780 193 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 GDF5OSQ5U4N7 250 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 TRAPPC5Q8IUR0 188 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 GDPD1Q8N9F7 314 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 OR10J5Q8NHC4 309 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 CT55Q8WUE5 264 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 C8orf76Q96K31 380 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 C2orf50Q96LR7 162 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 TRIM4Q9C037 500 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms