RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 OR5T1Q8NG75 326 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 GAR1Q9NY12 217 aaKnown RBP6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 NDUFA4O00483 81 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 MT-CO2P00403 227 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 SULT1A1P50225 295 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 LILRB2Q8N423 598 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 OR2K2Q8NGT1 345 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 THYN1Q9P016 225 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 HSPB11Q9Y547 144 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 TOMM40O96008 361 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 PRH1P02810 166 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 TPPP2P59282 170 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 RPP30P78346 268 aaKnown RBP6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 TMEM252Q8N6L7 170 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 TMEM190Q8WZ59 177 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 TECRQ9NZ01 308 aaKnown RBP6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 TCRBV4S1A1TA0A5B7 111 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 LINC01619G3V211 115 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 CCNKO75909 580 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 HOXA1P49639 335 aaPredicted RBP6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 PRR20EP86478 221 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 PRR20CP86479 221 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 PRR20DP86480 221 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 PRR20BP86481 221 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 PRR20AP86496 221 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 ETFRF1Q6IPR1 90 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 C1QL4Q86Z23 238 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 VSIRQ9H7M9 311 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 SETD2Q9BYW2 2564 aaPredicted RBP6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 TRAV30A0A087WSZ9 112 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 CYB5BO43169 146 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 SIX6O95475 246 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 CSN3P07498 182 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 BCAP31P51572 246 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 FGL1Q08830 312 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 ATP6V1FQ16864 119 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 C12orf54Q6X4T0 127 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 SLC16A13Q7RTY0 426 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 TMEM144Q7Z5S9 345 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 C17orf77Q96MU5 243 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 MED28Q9H204 178 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 RANGRFQ9HD47 186 aaPredicted RBP6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 PSENENQ9NZ42 101 aa6.31□□□□□ -1.4
CDC42SE2-208ENST00000505065 CHRDL1Q9BU40 450 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 C21orf62Q9NYP8 219 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 WDR83OSQ9Y284 106 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 RPS10-NUDT3A0A1W2PQS6 291 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 SSSCA1O60232 199 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 OR2J3O76001 311 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 ACTL6BO94805 426 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 IFNA17P01571 189 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 ZNF616Q08AN1 781 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 LCNL1Q6ZST4 164 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 CYTL1Q9NRR1 136 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 STRAPQ9Y3F4 350 aaKnown RBP6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 C13orf42A0A1B0GVH6 325 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 CCL24O00175 119 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 CRYBB3P26998 211 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 PXDC1Q5TGL8 231 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 OR4F17Q8NGA8 305 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 OR11H4Q8NGC9 324 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 OR4F4Q96R69 305 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 PDCD10Q9BUL8 212 aa6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 HUWE1Q7Z6Z7 4374 aaKnown RBP6.3□□□□□ -1.4
CDC42SE2-208ENST00000505065 MRPS12O15235 138 aaKnown RBP6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 LINC00869P0C866 280 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 MFAP4P55083 255 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 EWSR1Q01844 656 aaKnown RBP eCLIP6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 SPINK9Q5DT21 86 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 C9orf152Q5JTZ5 239 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 TREML4Q6UXN2 200 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 OR1N2Q8NGR9 330 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 MRPL27Q9P0M9 148 aaKnown RBP6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 TRAV2A0A0B4J234 112 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 TMEM213A2RRL7 107 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 GGCTO75223 188 aaKnown RBP6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 PET100P0DJ07 73 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 C8orf86Q6ZUL3 223 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 OR2G3Q8NGZ4 309 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 SUN5Q8TC36 379 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 WFDC1Q9HC57 220 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 A0A1B0GVG6 124 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 CEBPZOSA8MTT3 80 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 C1QBP02746 253 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 HOXD3P31249 432 aaPredicted RBP6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 OPCMLQ14982 345 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 MLANAQ16655 118 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 ACOT7LQ6ZUV0 252 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 RCC1LQ96I51 464 aaKnown RBP6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 MAGT1Q9H0U3 335 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 TIMM9Q9Y5J7 89 aa6.29□□□□□ -1.4
CDC42SE2-208ENST00000505065 SSNA1O43805 119 aa6.28□□□□□ -1.4
CDC42SE2-208ENST00000505065 PF4V1P10720 104 aa6.28□□□□□ -1.4
CDC42SE2-208ENST00000505065 S100A11P31949 105 aa6.28□□□□□ -1.4
CDC42SE2-208ENST00000505065 RAB11AP62491 216 aa6.28□□□□□ -1.4
CDC42SE2-208ENST00000505065 BEAN1Q3B7T3 259 aa6.28□□□□□ -1.4
CDC42SE2-208ENST00000505065 STPG3Q8N7X2 389 aa6.28□□□□□ -1.4
CDC42SE2-208ENST00000505065 UBAC2Q8NBM4 344 aa6.28□□□□□ -1.4
CDC42SE2-208ENST00000505065 KLHL30-AS1Q8NEE0 82 aa6.28□□□□□ -1.4
CDC42SE2-208ENST00000505065 MGST2Q99735 147 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms