RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 HIST1H1BP16401 226 aaKnown RBP3.78□□□□□ -1.8
LMNB1-208ENST00000504788 NPY1RP25929 384 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 HOXA1P49639 335 aaPredicted RBP3.78□□□□□ -1.8
LMNB1-208ENST00000504788 ERHP84090 104 aaKnown RBP3.78□□□□□ -1.8
LMNB1-208ENST00000504788 VWC2Q2TAL6 325 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 PRR31Q5SQ13 230 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 LINC00528Q8N1L1 170 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 TMEM252Q8N6L7 170 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 LINC00482Q8N8I6 264 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 OR11H4Q8NGC9 324 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 OR1L6Q8NGR2 347 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 RNASE11Q8TAA1 199 aaKnown RBP3.78□□□□□ -1.8
LMNB1-208ENST00000504788 RNASEH2CQ8TDP1 164 aaKnown RBP3.78□□□□□ -1.8
LMNB1-208ENST00000504788 RAB40CQ96S21 281 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 HEYLQ9NQ87 328 aaPredicted RBP3.78□□□□□ -1.8
LMNB1-208ENST00000504788 GSKIPQ9P0R6 139 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 LSM4Q9Y4Z0 139 aaKnown RBP3.78□□□□□ -1.8
LMNB1-208ENST00000504788 PRKDCP78527 4128 aaKnown RBP3.78□□□□□ -1.8
LMNB1-208ENST00000504788 MEGF8Q7Z7M0 2845 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 IGHV3-21A0A0B4J1V1 117 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 TCRBV4S1A1TA0A5B7 111 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 FAM24AA6NFZ4 105 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 CEBPZOSA8MTT3 80 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 FAM25EA8MYX2 175 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 PPP5D1E7EU14 171 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 EDN2P20800 178 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 EXOSC2Q13868 293 aaKnown RBP3.77□□□□□ -1.81
LMNB1-208ENST00000504788 KLF5Q13887 457 aaPredicted RBP3.77□□□□□ -1.81
LMNB1-208ENST00000504788 GAMTQ14353 236 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 SLC25A24Q6NUK1 477 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 UNQ9165/PRO28630Q6UXU0 137 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 C12orf54Q6X4T0 127 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 TMEM182Q6ZP80 229 aaPredicted RBP3.77□□□□□ -1.81
LMNB1-208ENST00000504788 MRPL41Q8IXM3 137 aaKnown RBP3.77□□□□□ -1.81
LMNB1-208ENST00000504788 STPG3Q8N7X2 389 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 C3orf56Q8N813 242 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 KLHL30-AS1Q8NEE0 82 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 OR11H1Q8NG94 326 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 OR4X1Q8NH49 305 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 ASB13Q8WXK3 278 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 DUX3Q96PT4 197 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 CIB3Q96Q77 187 aaPredicted RBP3.77□□□□□ -1.81
LMNB1-208ENST00000504788 NEURL2Q9BR09 285 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 MED28Q9H204 178 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 HIPK2Q9H2X6 1198 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 ZFAND3Q9H8U3 227 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 TRBV7-1A0A0A6YYK4 115 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 A0A0G2JLM5 398 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 A8MWP6 167 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 FNDC10F2Z333 226 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 CCL24O00175 119 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 CORTO00230 105 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 TGOLN2O43493 480 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 CLN5O75503 358 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 MED6O75586 246 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 LY86O95711 162 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 IGHV3-23P01764 117 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 CLEC3BP05452 202 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 METTL15P1P0C7V9 234 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 SLC25A4P12235 298 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 DEFA4P12838 97 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 GPX4P36969 197 aaPredicted RBP3.77□□□□□ -1.81
LMNB1-208ENST00000504788 SNCAP37840 140 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 P2RY1P47900 373 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 BCAP31P51572 246 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 CYCSP99999 105 aaKnown RBP3.77□□□□□ -1.81
LMNB1-208ENST00000504788 NHLH2Q02577 135 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 SPANXN5Q5MJ07 72 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 CLEC19AQ6UXS0 136 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 ACOT7LQ6ZUV0 252 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 THAP8Q8NA92 274 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 CACNG8Q8WXS5 425 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 DLX4Q92988 240 aaPredicted RBP3.77□□□□□ -1.81
LMNB1-208ENST00000504788 CXorf58Q96LI9 332 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 OR5B12Q96R08 314 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 TXN2Q99757 166 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 PDCD10Q9BUL8 212 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 RANGRFQ9HD47 186 aaPredicted RBP3.77□□□□□ -1.81
LMNB1-208ENST00000504788 C21orf62Q9NYP8 219 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 PSENENQ9NZ42 101 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 MBD2Q9UBB5 411 aa3.77□□□□□ -1.81
LMNB1-208ENST00000504788 PEF1Q9UBV8 284 aaKnown RBP3.77□□□□□ -1.81
LMNB1-208ENST00000504788 LSM5Q9Y4Y9 91 aaKnown RBP3.77□□□□□ -1.81
LMNB1-208ENST00000504788 A0A1W2PRX2 142 aa3.76□□□□□ -1.81
LMNB1-208ENST00000504788 TMEM213A2RRL7 107 aa3.76□□□□□ -1.81
LMNB1-208ENST00000504788 E5RGE8 158 aa3.76□□□□□ -1.81
LMNB1-208ENST00000504788 SMLR1H3BR10 107 aa3.76□□□□□ -1.81
LMNB1-208ENST00000504788 SCAF4O95104 1147 aaKnown RBP3.76□□□□□ -1.81
LMNB1-208ENST00000504788 SCGB1D2O95969 90 aa3.76□□□□□ -1.81
LMNB1-208ENST00000504788 IFNA10P01566 189 aa3.76□□□□□ -1.81
LMNB1-208ENST00000504788 HSPB1P04792 205 aaKnown RBP3.76□□□□□ -1.81
LMNB1-208ENST00000504788 HOXD3P31249 432 aaPredicted RBP3.76□□□□□ -1.81
LMNB1-208ENST00000504788 GPR183P32249 361 aa3.76□□□□□ -1.81
LMNB1-208ENST00000504788 MYCNOSP40205 109 aa3.76□□□□□ -1.81
LMNB1-208ENST00000504788 SULT1A1P50225 295 aa3.76□□□□□ -1.81
LMNB1-208ENST00000504788 SLURP1P55000 103 aa3.76□□□□□ -1.81
LMNB1-208ENST00000504788 RAP2BP61225 183 aa3.76□□□□□ -1.81
LMNB1-208ENST00000504788 EWSR1Q01844 656 aaKnown RBP eCLIP3.76□□□□□ -1.814e-8■■■□□ 17.2
LMNB1-208ENST00000504788 ATP5G2Q06055 141 aa3.76□□□□□ -1.81
LMNB1-208ENST00000504788 ZNF616Q08AN1 781 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms