RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 C2orf83Q53S99 150 aa15.92■□□□□ 0.14
TRAPPC11-203ENST00000504526 LAMTOR1Q6IAA8 161 aa15.92■□□□□ 0.14
TRAPPC11-203ENST00000504526 LYZL2Q7Z4W2 148 aa15.92■□□□□ 0.14
TRAPPC11-203ENST00000504526 CENPSQ8N2Z9 138 aa15.92■□□□□ 0.14
TRAPPC11-203ENST00000504526 OR10C1Q96KK4 312 aa15.92■□□□□ 0.14
TRAPPC11-203ENST00000504526 HIPK2Q9H2X6 1198 aa15.92■□□□□ 0.14
TRAPPC11-203ENST00000504526 A0A1B0GU03 582 aa15.91■□□□□ 0.14
TRAPPC11-203ENST00000504526 YIF1AO95070 293 aa15.91■□□□□ 0.14
TRAPPC11-203ENST00000504526 SCAF4O95104 1147 aaKnown RBP15.91■□□□□ 0.14
TRAPPC11-203ENST00000504526 VAMP1P23763 118 aa15.91■□□□□ 0.14
TRAPPC11-203ENST00000504526 UBE2MP61081 183 aaKnown RBP15.91■□□□□ 0.14
TRAPPC11-203ENST00000504526 LRTM2Q8N967 370 aa15.91■□□□□ 0.14
TRAPPC11-203ENST00000504526 SLC24A4Q8NFF2 622 aa15.91■□□□□ 0.14
TRAPPC11-203ENST00000504526 OR52B4Q8NGK2 314 aa15.91■□□□□ 0.14
TRAPPC11-203ENST00000504526 RNASEH2CQ8TDP1 164 aaKnown RBP15.91■□□□□ 0.14
TRAPPC11-203ENST00000504526 SPAG8Q99932 426 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC11-203ENST00000504526 TM2D3Q9BRN9 247 aa15.91■□□□□ 0.14
TRAPPC11-203ENST00000504526 DNAH9Q9NYC9 4486 aa15.9■□□□□ 0.14
TRAPPC11-203ENST00000504526 CENPXA8MT69 81 aa15.9■□□□□ 0.14
TRAPPC11-203ENST00000504526 OR11H12B2RN74 326 aa15.9■□□□□ 0.14
TRAPPC11-203ENST00000504526 TMEM50AO95807 157 aa15.9■□□□□ 0.14
TRAPPC11-203ENST00000504526 TNFRSF9Q07011 255 aa15.9■□□□□ 0.14
TRAPPC11-203ENST00000504526 ZNF600Q6ZNG1 722 aa15.9■□□□□ 0.14
TRAPPC11-203ENST00000504526 OR4X1Q8NH49 305 aa15.9■□□□□ 0.14
TRAPPC11-203ENST00000504526 RCHY1Q96PM5 261 aa15.9■□□□□ 0.14
TRAPPC11-203ENST00000504526 C7orf50Q9BRJ6 194 aaKnown RBP15.9■□□□□ 0.14
TRAPPC11-203ENST00000504526 GINS3Q9BRX5 216 aa15.9■□□□□ 0.14
TRAPPC11-203ENST00000504526 HSPB7Q9UBY9 170 aa15.9■□□□□ 0.14
TRAPPC11-203ENST00000504526 SMPXQ9UHP9 88 aa15.9■□□□□ 0.14
TRAPPC11-203ENST00000504526 TSPAN4O14817 238 aa15.89■□□□□ 0.13
TRAPPC11-203ENST00000504526 CLN5O75503 358 aa15.89■□□□□ 0.13
TRAPPC11-203ENST00000504526 SFT2D2O95562 160 aa15.89■□□□□ 0.13
TRAPPC11-203ENST00000504526 ZNF414Q96IQ9 312 aa15.89■□□□□ 0.13
TRAPPC11-203ENST00000504526 FNDC4Q9H6D8 234 aaPredicted RBP15.89■□□□□ 0.13
TRAPPC11-203ENST00000504526 SELENOKQ9Y6D0 94 aa15.89■□□□□ 0.13
TRAPPC11-203ENST00000504526 IGHV3OR16-8A0A075B7F1 116 aa15.88■□□□□ 0.13
TRAPPC11-203ENST00000504526 TRAV30A0A087WSZ9 112 aa15.88■□□□□ 0.13
TRAPPC11-203ENST00000504526 TRAV14DV4A0A0A6YYC5 116 aa15.88■□□□□ 0.13
TRAPPC11-203ENST00000504526 IGHV7-4-1A0A0J9YVY3 117 aa15.88■□□□□ 0.13
TRAPPC11-203ENST00000504526 ZNF207O43670 478 aaKnown RBP15.88■□□□□ 0.13
TRAPPC11-203ENST00000504526 NDUFB6O95139 128 aa15.88■□□□□ 0.13
TRAPPC11-203ENST00000504526 SLC25A4P12235 298 aa15.88■□□□□ 0.13
TRAPPC11-203ENST00000504526 NPY1RP25929 384 aa15.88■□□□□ 0.13
TRAPPC11-203ENST00000504526 BMI1P35226 326 aa15.88■□□□□ 0.13
TRAPPC11-203ENST00000504526 PPP1R1AQ13522 171 aa15.88■□□□□ 0.13
TRAPPC11-203ENST00000504526 DEFB125Q8N687 156 aa15.88■□□□□ 0.13
TRAPPC11-203ENST00000504526 OR1S1Q8NH92 325 aa15.88■□□□□ 0.13
TRAPPC11-203ENST00000504526 DTD1Q8TEA8 209 aa15.88■□□□□ 0.13
TRAPPC11-203ENST00000504526 SDHCQ99643 169 aaPredicted RBP15.88■□□□□ 0.13
TRAPPC11-203ENST00000504526 SPATA25Q9BR10 227 aa15.88■□□□□ 0.13
TRAPPC11-203ENST00000504526 TMED3Q9Y3Q3 217 aa15.88■□□□□ 0.13
TRAPPC11-203ENST00000504526 U3KQ87 197 aa15.88■□□□□ 0.13
TRAPPC11-203ENST00000504526 NXPH3O95157 252 aa15.87■□□□□ 0.13
TRAPPC11-203ENST00000504526 SLC25A6P12236 298 aa15.87■□□□□ 0.13
TRAPPC11-203ENST00000504526 ATP5IP56385 69 aaPredicted RBP15.87■□□□□ 0.13
TRAPPC11-203ENST00000504526 HAGHQ16775 308 aa15.87■□□□□ 0.13
TRAPPC11-203ENST00000504526 ETFRF1Q6IPR1 90 aa15.87■□□□□ 0.13
TRAPPC11-203ENST00000504526 TOMM20LQ6UXN7 152 aa15.87■□□□□ 0.13
TRAPPC11-203ENST00000504526 LINC00322Q6ZN03 302 aaPredicted RBP15.87■□□□□ 0.13
TRAPPC11-203ENST00000504526 TMEM116Q8NCL8 245 aa15.87■□□□□ 0.13
TRAPPC11-203ENST00000504526 IFNA10P01566 189 aa15.86■□□□□ 0.13
TRAPPC11-203ENST00000504526 IL7P13232 177 aa15.86■□□□□ 0.13
TRAPPC11-203ENST00000504526 RHPN1-AS1Q9BWJ2 59 aa15.86■□□□□ 0.13
TRAPPC11-203ENST00000504526 SRD5A3Q9H8P0 318 aa15.86■□□□□ 0.13
TRAPPC11-203ENST00000504526 PUS1Q9Y606 427 aaKnown RBP eCLIP15.86■□□□□ 0.13
TRAPPC11-203ENST00000504526 CHEK1O14757 476 aa15.85■□□□□ 0.13
TRAPPC11-203ENST00000504526 CD5P06127 495 aa15.85■□□□□ 0.13
TRAPPC11-203ENST00000504526 MLANAQ16655 118 aa15.85■□□□□ 0.13
TRAPPC11-203ENST00000504526 CNPY1Q3B7I2 92 aa15.85■□□□□ 0.13
TRAPPC11-203ENST00000504526 LINC00299Q6ZSB3 139 aa15.85■□□□□ 0.13
TRAPPC11-203ENST00000504526 RBKSQ9H477 322 aa15.85■□□□□ 0.13
TRAPPC11-203ENST00000504526 MRPL36Q9P0J6 103 aaKnown RBP15.85■□□□□ 0.13
TRAPPC11-203ENST00000504526 LINC00854A0A1B0GVQ3 168 aa15.84■□□□□ 0.13
TRAPPC11-203ENST00000504526 OR4C46A6NHA9 309 aa15.84■□□□□ 0.13
TRAPPC11-203ENST00000504526 FAM90A26D6RGX4 464 aa15.84■□□□□ 0.13
TRAPPC11-203ENST00000504526 PITX3O75364 302 aa15.84■□□□□ 0.13
TRAPPC11-203ENST00000504526 WFDC10AQ9H1F0 79 aa15.84■□□□□ 0.13
TRAPPC11-203ENST00000504526 ZFAND3Q9H8U3 227 aa15.84■□□□□ 0.13
TRAPPC11-203ENST00000504526 STAB2Q8WWQ8 2551 aa15.83■□□□□ 0.13
TRAPPC11-203ENST00000504526 MED6O75586 246 aa15.83■□□□□ 0.12
TRAPPC11-203ENST00000504526 PRSS54Q6PEW0 395 aa15.83■□□□□ 0.12
TRAPPC11-203ENST00000504526 OR1S2Q8NGQ3 325 aa15.83■□□□□ 0.12
TRAPPC11-203ENST00000504526 TMEM170AQ8WVE7 144 aa15.83■□□□□ 0.12
TRAPPC11-203ENST00000504526 RNF2Q99496 336 aa15.83■□□□□ 0.12
TRAPPC11-203ENST00000504526 FAM110AQ9BQ89 295 aa15.83■□□□□ 0.12
TRAPPC11-203ENST00000504526 C9orf170A2RU37 121 aa15.82■□□□□ 0.12
TRAPPC11-203ENST00000504526 RND2P52198 227 aa15.82■□□□□ 0.12
TRAPPC11-203ENST00000504526 COQ8AQ8NI60 647 aa15.82■□□□□ 0.12
TRAPPC11-203ENST00000504526 TMEM231Q9H6L2 316 aa15.82■□□□□ 0.12
TRAPPC11-203ENST00000504526 IGHV3-49A0A0A0MS15 119 aa15.81■□□□□ 0.12
TRAPPC11-203ENST00000504526 RBMY1BA6NDE4 496 aaKnown RBP15.81■□□□□ 0.12
TRAPPC11-203ENST00000504526 RBMY1EA6NEQ0 496 aaKnown RBP15.81■□□□□ 0.12
TRAPPC11-203ENST00000504526 IGKV1-17P01599 117 aa15.81■□□□□ 0.12
TRAPPC11-203ENST00000504526 RBMY1DP0C7P1 496 aaKnown RBP15.81■□□□□ 0.12
TRAPPC11-203ENST00000504526 IGLC1P0CG04 106 aa15.81■□□□□ 0.12
TRAPPC11-203ENST00000504526 BTCP35070 178 aa15.81■□□□□ 0.12
TRAPPC11-203ENST00000504526 CMC4P56277 68 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC11-203ENST00000504526 CIB3Q96Q77 187 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC11-203ENST00000504526 VSIRQ9H7M9 311 aa15.81■□□□□ 0.12
TRAPPC11-203ENST00000504526 TENM3Q9P273 2699 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms