RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 UBTD1Q9HAC8 227 aa7.85□□□□□ -1.15
COL1A1-210ENST00000504289 LPAR2Q9HBW0 351 aa7.85□□□□□ -1.15
COL1A1-210ENST00000504289 SEPSECSQ9HD40 501 aaKnown RBP7.85□□□□□ -1.15
COL1A1-210ENST00000504289 IGHV3-72A0A0B4J1Y9 119 aa7.84□□□□□ -1.15
COL1A1-210ENST00000504289 IGHV2-70DA0A0C4DH43 119 aa7.84□□□□□ -1.15
COL1A1-210ENST00000504289 TEX22C9J3V5 150 aa7.84□□□□□ -1.15
COL1A1-210ENST00000504289 S100PP25815 95 aa7.84□□□□□ -1.15
COL1A1-210ENST00000504289 SRP14P37108 136 aaKnown RBP7.84□□□□□ -1.15
COL1A1-210ENST00000504289 UQCRFS1P47985 274 aa7.84□□□□□ -1.15
COL1A1-210ENST00000504289 PDLIM4P50479 330 aa7.84□□□□□ -1.15
COL1A1-210ENST00000504289 UBE2E1P51965 193 aa7.84□□□□□ -1.15
COL1A1-210ENST00000504289 LGALS4P56470 323 aa7.84□□□□□ -1.15
COL1A1-210ENST00000504289 S100A7AQ86SG5 101 aa7.84□□□□□ -1.15
COL1A1-210ENST00000504289 SRSF12Q8WXF0 261 aaKnown RBP7.84□□□□□ -1.15
COL1A1-210ENST00000504289 ISOC2Q96AB3 205 aa7.84□□□□□ -1.15
COL1A1-210ENST00000504289 ACY3Q96HD9 319 aa7.84□□□□□ -1.15
COL1A1-210ENST00000504289 OR5B12Q96R08 314 aa7.84□□□□□ -1.15
COL1A1-210ENST00000504289 PYGO2Q9BRQ0 406 aa7.84□□□□□ -1.15
COL1A1-210ENST00000504289 FNDC4Q9H6D8 234 aaPredicted RBP7.84□□□□□ -1.15
COL1A1-210ENST00000504289 MAST4O15021 2626 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 H7BYZ3 331 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 COX7A2P2O60397 106 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 LY6HO94772 140 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 NPPCP23582 126 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 CDKN1AP38936 164 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 LMO4P61968 165 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 GNB1P62873 340 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 PLGLAQ15195 96 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 MMDQ15546 238 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 ADIRFQ15847 76 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 C5orf64Q2M2E5 130 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 ZNF674Q2M3X9 581 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 C10orf55Q5SWW7 151 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 C10orf113Q5VZT2 155 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 ZNF562Q6V9R5 426 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 VMO1Q7Z5L0 202 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 OR4X1Q8NH49 305 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 OR2T6Q8NHC8 308 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 NPIPB3Q92617 1050 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 EAF1Q96JC9 268 aaPredicted RBP7.83□□□□□ -1.16
COL1A1-210ENST00000504289 ZNF48Q96MX3 618 aaPredicted RBP7.83□□□□□ -1.16
COL1A1-210ENST00000504289 FBXL15Q9H469 300 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 TPSG1Q9NRR2 321 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 TNFRSF19Q9NS68 423 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 C1RLQ9NZP8 487 aa7.83□□□□□ -1.16
COL1A1-210ENST00000504289 IGKV1D-37A0A075B6S9 117 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 TRAV9-1A0A075B6T8 112 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 CYSRT1A8MQ03 144 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 NPIPB5A8MRT5 1133 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 NDUFB4O95168 129 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 S100A6P06703 90 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 PFN1P07737 140 aaKnown RBP7.82□□□□□ -1.16
COL1A1-210ENST00000504289 HOXB4P17483 251 aaPredicted RBP7.82□□□□□ -1.16
COL1A1-210ENST00000504289 BRS3P32247 399 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 ATP5G3P48201 142 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 LCN2P80188 198 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 KCNIP4Q6PIL6 250 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 MIR17HGQ75NE6 70 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 LINC01551Q86U37 167 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 Q8N6K4 173 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 Q8WTZ3 238 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 TMEM37Q8WXS4 190 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 PERPQ96FX8 193 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 FAM210BQ96KR6 192 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 RNF24Q9Y225 148 aa7.82□□□□□ -1.16
COL1A1-210ENST00000504289 DOPEY1Q5JWR5 2465 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 TRAV30A0A087WSZ9 112 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 C5orf52A6NGY3 159 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 C19orf84I3L1E1 186 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 I3L2K1 104 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 OR7C2O60412 319 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 TOX4O94842 621 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 CNIH1O95406 144 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 FAM106CPP0CH98 169 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 DEFA4P12838 97 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 ZFP36P26651 326 aaKnown RBP7.81□□□□□ -1.16
COL1A1-210ENST00000504289 CNTFRP26992 372 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 RPS10P46783 165 aaKnown RBP7.81□□□□□ -1.16
COL1A1-210ENST00000504289 UBE2G2P60604 165 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 SSBP2P81877 361 aaPredicted RBP7.81□□□□□ -1.16
COL1A1-210ENST00000504289 FOXL1Q12952 345 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 MLANAQ16655 118 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 KLK9Q2XQG4 91 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 LDLRAD2Q5SZI1 272 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 SPATA31B1PQ5VZV4 182 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 LINC00518Q8N0U6 118 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 OR51G1Q8NGK1 321 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 MISP3Q96FF7 219 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 FAM167A-AS1Q96KT0 104 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 SRD5A3Q9H8P0 318 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 KLK9Q9UKQ9 250 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 YTHDF2Q9Y5A9 579 aaKnown RBP7.81□□□□□ -1.16
COL1A1-210ENST00000504289 HRNRQ86YZ3 2850 aaPredicted RBP7.81□□□□□ -1.16
COL1A1-210ENST00000504289 NAV3Q8IVL0 2385 aa7.81□□□□□ -1.16
COL1A1-210ENST00000504289 CFAP46Q8IYW2 2715 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 AP4M1O00189 453 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 UBE2CO00762 179 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 GGCTO75223 188 aaKnown RBP7.8□□□□□ -1.16
COL1A1-210ENST00000504289 HYPMO75409 117 aa7.8□□□□□ -1.16
COL1A1-210ENST00000504289 SCGB2A1O75556 95 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms