RNA–Protein interactions for RNA: ENST00000503420.5

CCHCR1-217, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-217ENST00000503420 TRAV14DV4A0A0A6YYC5 116 aa16.54■□□□□ 0.24
CCHCR1-217ENST00000503420 A0A0B4J2A0 478 aa16.54■□□□□ 0.24
CCHCR1-217ENST00000503420 RPS10-NUDT3A0A1W2PQS6 291 aa16.54■□□□□ 0.24
CCHCR1-217ENST00000503420 BMI1P35226 326 aa16.54■□□□□ 0.24
CCHCR1-217ENST00000503420 CCR6P51684 374 aa16.54■□□□□ 0.24
CCHCR1-217ENST00000503420 TMEM128Q5BJH2 165 aa16.54■□□□□ 0.24
CCHCR1-217ENST00000503420 TRIQKQ629K1 86 aa16.54■□□□□ 0.24
CCHCR1-217ENST00000503420 PVRIGQ6DKI7 326 aa16.54■□□□□ 0.24
CCHCR1-217ENST00000503420 NOXA1Q86UR1 476 aa16.54■□□□□ 0.24
CCHCR1-217ENST00000503420 TMEM116Q8NCL8 245 aa16.54■□□□□ 0.24
CCHCR1-217ENST00000503420 SPAG8Q99932 426 aaPredicted RBP16.54■□□□□ 0.24
CCHCR1-217ENST00000503420 SHPKQ9UHJ6 478 aa16.54■□□□□ 0.24
CCHCR1-217ENST00000503420 SMPXQ9UHP9 88 aa16.54■□□□□ 0.24
CCHCR1-217ENST00000503420 IGHV7-4-1A0A0J9YVY3 117 aa16.52■□□□□ 0.24
CCHCR1-217ENST00000503420 TSPAN4O14817 238 aa16.52■□□□□ 0.24
CCHCR1-217ENST00000503420 NXPH3O95157 252 aa16.52■□□□□ 0.24
CCHCR1-217ENST00000503420 TMEM50AO95807 157 aa16.52■□□□□ 0.24
CCHCR1-217ENST00000503420 VAMP1P23763 118 aa16.52■□□□□ 0.24
CCHCR1-217ENST00000503420 SUPT4H1P63272 117 aaKnown RBP16.52■□□□□ 0.24
CCHCR1-217ENST00000503420 SMCO1Q147U7 214 aa16.52■□□□□ 0.24
CCHCR1-217ENST00000503420 ZNF600Q6ZNG1 722 aa16.52■□□□□ 0.24
CCHCR1-217ENST00000503420 LYZL2Q7Z4W2 148 aa16.52■□□□□ 0.24
CCHCR1-217ENST00000503420 OR10C1Q96KK4 312 aa16.52■□□□□ 0.24
CCHCR1-217ENST00000503420 RHPN1-AS1Q9BWJ2 59 aa16.52■□□□□ 0.24
CCHCR1-217ENST00000503420 SRRQ9GZT4 340 aa16.52■□□□□ 0.24
CCHCR1-217ENST00000503420 WFDC10AQ9H1F0 79 aa16.52■□□□□ 0.24
CCHCR1-217ENST00000503420 BSXQ3C1V8 233 aa16.51■□□□□ 0.23
CCHCR1-217ENST00000503420 C2orf83Q53S99 150 aa16.51■□□□□ 0.23
CCHCR1-217ENST00000503420 SLC24A4Q8NFF2 622 aa16.51■□□□□ 0.23
CCHCR1-217ENST00000503420 TRAV30A0A087WSZ9 112 aa16.5■□□□□ 0.23
CCHCR1-217ENST00000503420 RBMY1BA6NDE4 496 aaKnown RBP16.5■□□□□ 0.23
CCHCR1-217ENST00000503420 RBMY1EA6NEQ0 496 aaKnown RBP16.5■□□□□ 0.23
CCHCR1-217ENST00000503420 OR4C46A6NHA9 309 aa16.5■□□□□ 0.23
CCHCR1-217ENST00000503420 C3orf84H3BNL1 204 aa16.5■□□□□ 0.23
CCHCR1-217ENST00000503420 CLN5O75503 358 aa16.5■□□□□ 0.23
CCHCR1-217ENST00000503420 RBMY1DP0C7P1 496 aaKnown RBP16.5■□□□□ 0.23
CCHCR1-217ENST00000503420 ETFRF1Q6IPR1 90 aa16.5■□□□□ 0.23
CCHCR1-217ENST00000503420 TOMM20LQ6UXN7 152 aa16.5■□□□□ 0.23
CCHCR1-217ENST00000503420 LINC00322Q6ZN03 302 aaPredicted RBP16.5■□□□□ 0.23
CCHCR1-217ENST00000503420 OR4X1Q8NH49 305 aa16.5■□□□□ 0.23
CCHCR1-217ENST00000503420 OR1S1Q8NH92 325 aa16.5■□□□□ 0.23
CCHCR1-217ENST00000503420 RNASEH2CQ8TDP1 164 aaKnown RBP16.5■□□□□ 0.23
CCHCR1-217ENST00000503420 TENM3Q9P273 2699 aa16.49■□□□□ 0.23
CCHCR1-217ENST00000503420 IGHV3-49A0A0A0MS15 119 aa16.49■□□□□ 0.23
CCHCR1-217ENST00000503420 A0A1B0GU03 582 aa16.49■□□□□ 0.23
CCHCR1-217ENST00000503420 DUXBA0A1W2PPF3 345 aa16.49■□□□□ 0.23
CCHCR1-217ENST00000503420 NAP1L6A6NFF2 107 aa16.49■□□□□ 0.23
CCHCR1-217ENST00000503420 CHEK1O14757 476 aa16.49■□□□□ 0.23
CCHCR1-217ENST00000503420 IFNA10P01566 189 aa16.49■□□□□ 0.23
CCHCR1-217ENST00000503420 TNFRSF9Q07011 255 aa16.49■□□□□ 0.23
CCHCR1-217ENST00000503420 RBMS2Q15434 407 aaKnown RBP16.49■□□□□ 0.23
CCHCR1-217ENST00000503420 MLANAQ16655 118 aa16.49■□□□□ 0.23
CCHCR1-217ENST00000503420 NMSQ5H8A3 153 aa16.49■□□□□ 0.23
CCHCR1-217ENST00000503420 CENPSQ8N2Z9 138 aa16.49■□□□□ 0.23
CCHCR1-217ENST00000503420 FNDC4Q9H6D8 234 aaPredicted RBP16.49■□□□□ 0.23
CCHCR1-217ENST00000503420 PUS1Q9Y606 427 aaKnown RBP eCLIP16.49■□□□□ 0.23
CCHCR1-217ENST00000503420 U3KQ87 197 aa16.49■□□□□ 0.23
CCHCR1-217ENST00000503420 STAB2Q8WWQ8 2551 aa16.48■□□□□ 0.23
CCHCR1-217ENST00000503420 CENPXA8MT69 81 aa16.48■□□□□ 0.23
CCHCR1-217ENST00000503420 CD5P06127 495 aa16.48■□□□□ 0.23
CCHCR1-217ENST00000503420 SLC25A4P12235 298 aa16.48■□□□□ 0.23
CCHCR1-217ENST00000503420 NPY1RP25929 384 aa16.48■□□□□ 0.23
CCHCR1-217ENST00000503420 CITED4Q96RK1 184 aa16.48■□□□□ 0.23
CCHCR1-217ENST00000503420 RNF2Q99496 336 aa16.48■□□□□ 0.23
CCHCR1-217ENST00000503420 LOC102724200A0A096LPH7 203 aaPredicted RBP16.47■□□□□ 0.23
CCHCR1-217ENST00000503420 CMC4P56277 68 aaPredicted RBP16.47■□□□□ 0.23
CCHCR1-217ENST00000503420 PAFAH1B2P68402 229 aa16.47■□□□□ 0.23
CCHCR1-217ENST00000503420 MUC7Q8TAX7 377 aa16.47■□□□□ 0.23
CCHCR1-217ENST00000503420 DTD1Q8TEA8 209 aa16.47■□□□□ 0.23
CCHCR1-217ENST00000503420 GGTLC1Q9BX51 225 aa16.47■□□□□ 0.23
CCHCR1-217ENST00000503420 TMEM231Q9H6L2 316 aa16.47■□□□□ 0.23
CCHCR1-217ENST00000503420 HSPB7Q9UBY9 170 aa16.47■□□□□ 0.23
CCHCR1-217ENST00000503420 IGHV3OR16-13A0A075B7E8 117 aa16.46■□□□□ 0.23
CCHCR1-217ENST00000503420 IGHV3-74A0A0B4J1X5 117 aa16.46■□□□□ 0.23
CCHCR1-217ENST00000503420 LINC00854A0A1B0GVQ3 168 aa16.46■□□□□ 0.23
CCHCR1-217ENST00000503420 SFT2D2O95562 160 aa16.46■□□□□ 0.23
CCHCR1-217ENST00000503420 NPPCP23582 126 aa16.46■□□□□ 0.23
CCHCR1-217ENST00000503420 BAK1Q16611 211 aa16.46■□□□□ 0.23
CCHCR1-217ENST00000503420 NARS2Q96I59 477 aaKnown RBP16.46■□□□□ 0.23
CCHCR1-217ENST00000503420 RBKSQ9H477 322 aa16.46■□□□□ 0.23
CCHCR1-217ENST00000503420 UBQLN2Q9UHD9 624 aa16.46■□□□□ 0.23
CCHCR1-217ENST00000503420 HUWE1Q7Z6Z7 4374 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-217ENST00000503420 A0A1W2PS18 150 aa16.45■□□□□ 0.22
CCHCR1-217ENST00000503420 ATP5IP56385 69 aaPredicted RBP16.45■□□□□ 0.22
CCHCR1-217ENST00000503420 UBE2MP61081 183 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-217ENST00000503420 RPL11P62913 178 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-217ENST00000503420 LRTM2Q8N967 370 aa16.45■□□□□ 0.22
CCHCR1-217ENST00000503420 OR1S2Q8NGQ3 325 aa16.45■□□□□ 0.22
CCHCR1-217ENST00000503420 METTL26Q96S19 204 aa16.45■□□□□ 0.22
CCHCR1-217ENST00000503420 MRPL36Q9P0J6 103 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-217ENST00000503420 TMED3Q9Y3Q3 217 aa16.45■□□□□ 0.22
CCHCR1-217ENST00000503420 IGKV3-7A0A075B6H7 116 aa16.44■□□□□ 0.22
CCHCR1-217ENST00000503420 IFNA4P05014 189 aa16.44■□□□□ 0.22
CCHCR1-217ENST00000503420 TFPI2P48307 235 aa16.44■□□□□ 0.22
CCHCR1-217ENST00000503420 RND2P52198 227 aa16.44■□□□□ 0.22
CCHCR1-217ENST00000503420 PPP1R1AQ13522 171 aa16.44■□□□□ 0.22
CCHCR1-217ENST00000503420 TIGITQ495A1 244 aa16.44■□□□□ 0.22
CCHCR1-217ENST00000503420 TCF24Q7RTU0 167 aa16.44■□□□□ 0.22
CCHCR1-217ENST00000503420 Q8WTZ3 238 aa16.44■□□□□ 0.22
CCHCR1-217ENST00000503420 ZNF414Q96IQ9 312 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms