RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 RAB2BQ8WUD1 216 aa3.33□□□□□ -1.88
PMPCB-208ENST00000498530 ROPN1LQ96C74 230 aa3.33□□□□□ -1.88
PMPCB-208ENST00000498530 SFRP2Q96HF1 295 aa3.33□□□□□ -1.88
PMPCB-208ENST00000498530 FAM96AQ9H5X1 160 aa3.33□□□□□ -1.88
PMPCB-208ENST00000498530 ZNF391Q9UJN7 358 aa3.33□□□□□ -1.88
PMPCB-208ENST00000498530 CELSR1Q9NYQ6 3014 aa3.33□□□□□ -1.88
PMPCB-208ENST00000498530 PTPRJQ12913 1337 aa3.33□□□□□ -1.88
PMPCB-208ENST00000498530 SETD2Q9BYW2 2564 aaPredicted RBP3.32□□□□□ -1.88
PMPCB-208ENST00000498530 VGLL3A8MV65 326 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 E5RI56 91 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 LST1O00453 97 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 ZNF189O75820 626 aaPredicted RBP3.32□□□□□ -1.88
PMPCB-208ENST00000498530 OR7C1O76099 320 aaPredicted RBP3.32□□□□□ -1.88
PMPCB-208ENST00000498530 CPSF4O95639 269 aaKnown RBP3.32□□□□□ -1.88
PMPCB-208ENST00000498530 CRYGDP07320 174 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 CCL3P10147 92 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 ZNF14P17017 642 aaPredicted RBP3.32□□□□□ -1.88
PMPCB-208ENST00000498530 TBPL1P62380 186 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 PSG4Q00888 419 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 IL15RAQ13261 267 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 CDK10Q15131 360 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 SLC9A3R2Q15599 337 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 IGFL1Q6UW32 110 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 AP3S1Q92572 193 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 RNASE6Q93091 150 aaKnown RBP3.32□□□□□ -1.88
PMPCB-208ENST00000498530 RAD51AP1Q96B01 352 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 C12orf43Q96C57 262 aaKnown RBP3.32□□□□□ -1.88
PMPCB-208ENST00000498530 BTF3L4Q96K17 158 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 SIGMAR1Q99720 223 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 PRRT1Q99946 306 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 MND1Q9BWT6 205 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 ULBP3Q9BZM4 244 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 CXorf21Q9HAI6 301 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 NMNAT1Q9HAN9 279 aaPredicted RBP3.32□□□□□ -1.88
PMPCB-208ENST00000498530 SNX12Q9UMY4 172 aa3.32□□□□□ -1.88
PMPCB-208ENST00000498530 ZNF407Q9C0G0 2248 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 NID2Q14112 1375 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 A0A087WUU8 490 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 LOC102725191A0A1B0GVB3 256 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 GRIFINA4D1Z8 144 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 KNCNA6PVL3 124 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 A8MUN3 132 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 SLC25A16P16260 332 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 B2MP61769 119 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 POLR2GP62487 172 aaKnown RBP eCLIP3.31□□□□□ -1.88
PMPCB-208ENST00000498530 TAF1AQ15573 450 aaPredicted RBP3.31□□□□□ -1.88
PMPCB-208ENST00000498530 PRR9Q5T870 116 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 HACD4Q5VWC8 232 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 DHRS4L2Q6PKH6 230 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 DAND5Q8N907 189 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 MGLLQ99685 303 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 TMEM222Q9H0R3 208 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 IDI2-AS1Q9NZ38 188 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 PKIGQ9Y2B9 76 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 NOTCH2Q04721 2471 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 TET1Q8NFU7 2136 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 DOCK6Q96HP0 2047 aa3.31□□□□□ -1.88
PMPCB-208ENST00000498530 MGAQ8IWI9 3026 aa3.3□□□□□ -1.88
PMPCB-208ENST00000498530 UTP20O75691 2785 aaKnown RBP3.3□□□□□ -1.88
PMPCB-208ENST00000498530 KTN1Q86UP2 1357 aaKnown RBP3.3□□□□□ -1.88
PMPCB-208ENST00000498530 OR4C46A6NHA9 309 aa3.3□□□□□ -1.88
PMPCB-208ENST00000498530 TMEM238C9JI98 176 aa3.3□□□□□ -1.88
PMPCB-208ENST00000498530 LY6HO94772 140 aa3.3□□□□□ -1.88
PMPCB-208ENST00000498530 PRB1P04280 392 aa3.3□□□□□ -1.88
PMPCB-208ENST00000498530 COL8A2P25067 703 aa3.3□□□□□ -1.88
PMPCB-208ENST00000498530 RWDD2BP57060 319 aa3.3□□□□□ -1.88
PMPCB-208ENST00000498530 SNRPD2P62316 118 aaKnown RBP3.3□□□□□ -1.88
PMPCB-208ENST00000498530 ZNF141Q15928 474 aa3.3□□□□□ -1.88
PMPCB-208ENST00000498530 LIN52Q52LA3 116 aa3.3□□□□□ -1.88
PMPCB-208ENST00000498530 ZNF322Q6U7Q0 402 aaPredicted RBP3.3□□□□□ -1.88
PMPCB-208ENST00000498530 S100A7AQ86SG5 101 aa3.3□□□□□ -1.88
PMPCB-208ENST00000498530 STX12Q86Y82 276 aa3.3□□□□□ -1.88
PMPCB-208ENST00000498530 OR10A6Q8NH74 314 aa3.3□□□□□ -1.88
PMPCB-208ENST00000498530 C16orf95Q9H693 158 aa3.3□□□□□ -1.88
PMPCB-208ENST00000498530 ASF1BQ9NVP2 202 aa3.3□□□□□ -1.88
PMPCB-208ENST00000498530 CMTM6Q9NX76 183 aa3.3□□□□□ -1.88
PMPCB-208ENST00000498530 NF1P21359 2839 aa3.3□□□□□ -1.88
PMPCB-208ENST00000498530 LAMA1P25391 3075 aa3.29□□□□□ -1.88
PMPCB-208ENST00000498530 DOCK5Q9H7D0 1870 aa3.29□□□□□ -1.88
PMPCB-208ENST00000498530 SPEF2Q9C093 1822 aa3.29□□□□□ -1.88
PMPCB-208ENST00000498530 PTPRQQ9UMZ3 2332 aa3.29□□□□□ -1.88
PMPCB-208ENST00000498530 IGHV3-73A0A0B4J1V6 119 aa3.29□□□□□ -1.88
PMPCB-208ENST00000498530 C19orf71A6NCJ1 209 aa3.29□□□□□ -1.88
PMPCB-208ENST00000498530 C17orf98A8MV24 154 aa3.29□□□□□ -1.88
PMPCB-208ENST00000498530 FAAHO00519 579 aa3.29□□□□□ -1.88
PMPCB-208ENST00000498530 PSCAO43653 123 aa3.29□□□□□ -1.88
PMPCB-208ENST00000498530 HLA-DRB1P01911 266 aa3.29□□□□□ -1.88
PMPCB-208ENST00000498530 PRB2P02812 416 aaPredicted RBP3.29□□□□□ -1.88
PMPCB-208ENST00000498530 HRES1P13985 223 aa3.29□□□□□ -1.88
PMPCB-208ENST00000498530 KCNE1P15382 129 aa3.29□□□□□ -1.88
PMPCB-208ENST00000498530 CRHBPP24387 322 aa3.29□□□□□ -1.88
PMPCB-208ENST00000498530 RPL5P46777 297 aaKnown RBP3.29□□□□□ -1.88
PMPCB-208ENST00000498530 RBM11P57052 281 aaKnown RBP3.29□□□□□ -1.88
PMPCB-208ENST00000498530 NOXRED1Q6NXP6 359 aa3.29□□□□□ -1.88
PMPCB-208ENST00000498530 WDR59Q6PJI9 974 aa3.29□□□□□ -1.88
PMPCB-208ENST00000498530 CEP19Q96LK0 163 aa3.29□□□□□ -1.88
PMPCB-208ENST00000498530 CMSS1Q9BQ75 279 aaKnown RBP3.29□□□□□ -1.88
PMPCB-208ENST00000498530 PRELID1Q9Y255 219 aa3.29□□□□□ -1.88
PMPCB-208ENST00000498530 HEY1Q9Y5J3 304 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms