RNA–Protein interactions for RNA: ENST00000498053.5

LRRFIP1-215, Transcript of LRR binding FLII interacting protein 1, human

TSL 3

Gene LRRFIP1, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRFIP1-215	ENST00000498053	IL34	Q6ZMJ4	242 aa		13.5	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	BSCL2	Q96G97	398 aa	Predicted RBP	13.5	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	OR4C12	Q96R67	309 aa		13.5	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	PALMD	Q9NP74	551 aa		13.5	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	PAIP2B	Q9ULR5	123 aa	Known RBP	13.5	□□□□□ -0.25
LRRFIP1-215	ENST00000498053		U3KQ87	197 aa		13.5	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	IGHV3OR16-8	A0A075B7F1	116 aa		13.49	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	GOSR2	O14653	212 aa		13.49	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	SIX6	O95475	246 aa		13.49	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	CTSG	P08311	255 aa		13.49	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	CACNG8	Q8WXS5	425 aa		13.49	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	RCL1	Q9Y2P8	373 aa	Known RBP	13.49	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	SELENOK	Q9Y6D0	94 aa		13.49	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	MEGF8	Q7Z7M0	2845 aa		13.48	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	ZNF320	A2RRD8	509 aa		13.48	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	SNRPGP15	A8MWD9	76 aa		13.48	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	GNG7	O60262	68 aa		13.48	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	TMEM50A	O95807	157 aa		13.48	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	MBP	P02686	304 aa	Predicted RBP	13.48	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	DEFA6	Q01524	100 aa		13.48	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	DCTN2	Q13561	401 aa	Known RBP	13.48	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	IFNA4	P05014	189 aa		13.47	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	CSN3	P07498	182 aa		13.47	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	FCGR2B	P31994	310 aa	Predicted RBP	13.47	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	TATDN3	Q17R31	274 aa		13.47	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	SPANXN5	Q5MJ07	72 aa		13.47	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	GSG1L	Q6UXU4	331 aa		13.47	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	ADAMTSL5	Q6ZMM2	481 aa		13.47	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	SLC16A13	Q7RTY0	426 aa		13.47	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	REC114	Q7Z4M0	266 aa		13.47	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	GPHB5	Q86YW7	130 aa		13.47	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.47	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	GPR61	Q9BZJ8	451 aa		13.47	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.47	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	LSM5	Q9Y4Y9	91 aa	Known RBP	13.47	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	PRKDC	P78527	4128 aa	Known RBP	13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	TMEM213	A2RRL7	107 aa		13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	WIPF1	O43516	503 aa		13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	RND2	P52198	227 aa		13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	PAX9	P55771	341 aa		13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	CD69	Q07108	199 aa		13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	EGFEM1P	Q0D2K5	195 aa		13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	PRSS54	Q6PEW0	395 aa		13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	SPSB3	Q6PJ21	355 aa		13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	TMEM190	Q8WZ59	177 aa		13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	WDR89	Q96FK6	387 aa	Predicted RBP	13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	C2orf50	Q96LR7	162 aa		13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	CIB3	Q96Q77	187 aa	Predicted RBP	13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	ATP6V0B	Q99437	205 aa		13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	TXN2	Q99757	166 aa		13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	ELOVL1	Q9BW60	279 aa		13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	PEMT	Q9UBM1	199 aa		13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	ALG5	Q9Y673	324 aa		13.46	□□□□□ -0.25
LRRFIP1-215	ENST00000498053	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	C7orf66	A4D0T2	115 aa		13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	C2orf70	A6NJV1	201 aa		13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053		K7EPK0	472 aa		13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	LGALS9	O00182	355 aa		13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	NUPL2	O15504	423 aa	Known RBP	13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	ZNF207	O43670	478 aa	Known RBP	13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	SSNA1	O43805	119 aa		13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	CLN5	O75503	358 aa		13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	CCNK	O75909	580 aa		13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	NPBWR1	P48145	328 aa		13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	FAM106A	Q4KMX7	169 aa		13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	TM4SF20	Q53R12	229 aa		13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	NOXA1	Q86UR1	476 aa		13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	OR4X1	Q8NH49	305 aa		13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	ACY3	Q96HD9	319 aa		13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	PSENEN	Q9NZ42	101 aa		13.45	□□□□□ -0.26
LRRFIP1-215	ENST00000498053		A8MWP6	167 aa		13.44	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	S100A10	P60903	97 aa		13.44	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	RAB11A	P62491	216 aa		13.44	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	RAB32	Q13637	225 aa		13.44	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	RGS21	Q2M5E4	152 aa		13.44	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	TIGIT	Q495A1	244 aa		13.44	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	C20orf24	Q9BUV8	137 aa		13.44	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	GAR1	Q9NY12	217 aa	Known RBP	13.44	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	STRAP	Q9Y3F4	350 aa	Known RBP	13.44	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	PRSS46	E5RG02	174 aa		13.43	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	NDUFA4	O00483	81 aa		13.43	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	IGLV1-51	P01701	117 aa		13.43	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	SLC25A4	P12235	298 aa		13.43	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	FOLR2	P14207	255 aa		13.43	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	INSL3	P51460	131 aa		13.43	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	IL15RA	Q13261	267 aa		13.43	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	NPIPB3	Q92617	1050 aa		13.43	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	SMIM8	Q96KF7	97 aa		13.43	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	PRR25	Q96S07	402 aa		13.43	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	MGAT4C	Q9UBM8	478 aa		13.43	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	YIF1A	O95070	293 aa		13.42	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	IGKV1-17	P01599	117 aa		13.42	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	IGLC1	P0CG04	106 aa		13.42	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	H2BFS	P57053	126 aa		13.42	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	REL	Q04864	619 aa	Predicted RBP	13.42	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	ETFRF1	Q6IPR1	90 aa		13.42	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	RAB40C	Q96S21	281 aa		13.42	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	C11orf1	Q9H5F2	150 aa		13.42	□□□□□ -0.26
LRRFIP1-215	ENST00000498053	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms