RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CLEC3BP05452 202 aa11.64□□□□□ -0.55
NUP50-219ENST00000497960 FRMD6-AS1P0C7T7 363 aa11.64□□□□□ -0.55
NUP50-219ENST00000497960 IAPPP10997 89 aa11.64□□□□□ -0.55
NUP50-219ENST00000497960 NKX2-1P43699 371 aaPredicted RBP11.64□□□□□ -0.55
NUP50-219ENST00000497960 GTSCR1Q86UQ5 136 aa11.64□□□□□ -0.55
NUP50-219ENST00000497960 SLC24A4Q8NFF2 622 aa11.64□□□□□ -0.55
NUP50-219ENST00000497960 OR1P1Q8NH06 330 aa11.64□□□□□ -0.55
NUP50-219ENST00000497960 MISP3Q96FF7 219 aa11.64□□□□□ -0.55
NUP50-219ENST00000497960 ZNF320A2RRD8 509 aa11.63□□□□□ -0.55
NUP50-219ENST00000497960 HTR2BP41595 481 aa11.63□□□□□ -0.55
NUP50-219ENST00000497960 SUB1P53999 127 aaKnown RBP eCLIP11.63□□□□□ -0.55
NUP50-219ENST00000497960 SBSPONQ8IVN8 264 aa11.63□□□□□ -0.55
NUP50-219ENST00000497960 Q8N1Y9 231 aa11.63□□□□□ -0.55
NUP50-219ENST00000497960 ZNF502Q8TBZ5 544 aa11.63□□□□□ -0.55
NUP50-219ENST00000497960 VN1R17PQ8TDU5 208 aa11.63□□□□□ -0.55
NUP50-219ENST00000497960 MAGT1Q9H0U3 335 aa11.63□□□□□ -0.55
NUP50-219ENST00000497960 MGAT4CQ9UBM8 478 aa11.63□□□□□ -0.55
NUP50-219ENST00000497960 DNAH9Q9NYC9 4486 aa11.62□□□□□ -0.55
NUP50-219ENST00000497960 C2orf70A6NJV1 201 aa11.62□□□□□ -0.55
NUP50-219ENST00000497960 SYNGR2O43760 224 aa11.62□□□□□ -0.55
NUP50-219ENST00000497960 SSSCA1O60232 199 aa11.62□□□□□ -0.55
NUP50-219ENST00000497960 IGHV4-30-4P0DP06 118 aa11.62□□□□□ -0.55
NUP50-219ENST00000497960 RNASE2P10153 161 aaKnown RBP11.62□□□□□ -0.55
NUP50-219ENST00000497960 FOLR2P14207 255 aa11.62□□□□□ -0.55
NUP50-219ENST00000497960 NPY1RP25929 384 aa11.62□□□□□ -0.55
NUP50-219ENST00000497960 GPR183P32249 361 aa11.62□□□□□ -0.55
NUP50-219ENST00000497960 MFAP2P55001 183 aa11.62□□□□□ -0.55
NUP50-219ENST00000497960 PINX1Q96BK5 328 aaKnown RBP11.62□□□□□ -0.55
NUP50-219ENST00000497960 C2orf50Q96LR7 162 aa11.62□□□□□ -0.55
NUP50-219ENST00000497960 CIB3Q96Q77 187 aaPredicted RBP11.62□□□□□ -0.55
NUP50-219ENST00000497960 TECRQ9NZ01 308 aaKnown RBP11.62□□□□□ -0.55
NUP50-219ENST00000497960 IZUMO1RA6ND01 250 aa11.61□□□□□ -0.55
NUP50-219ENST00000497960 CORTO00230 105 aa11.61□□□□□ -0.55
NUP50-219ENST00000497960 SIX6O95475 246 aa11.61□□□□□ -0.55
NUP50-219ENST00000497960 IFNA10P01566 189 aa11.61□□□□□ -0.55
NUP50-219ENST00000497960 S100A10P60903 97 aa11.61□□□□□ -0.55
NUP50-219ENST00000497960 POLR2GP62487 172 aaKnown RBP eCLIP11.61□□□□□ -0.55
NUP50-219ENST00000497960 CD300EQ496F6 205 aaPredicted RBP11.61□□□□□ -0.55
NUP50-219ENST00000497960 ADAMTSL5Q6ZMM2 481 aa11.61□□□□□ -0.55
NUP50-219ENST00000497960 ZC4H2Q9NQZ6 224 aa11.61□□□□□ -0.55
NUP50-219ENST00000497960 PAIP2BQ9ULR5 123 aaKnown RBP11.61□□□□□ -0.55
NUP50-219ENST00000497960 LSM5Q9Y4Y9 91 aaKnown RBP11.61□□□□□ -0.55
NUP50-219ENST00000497960 COL7A1Q02388 2944 aa11.61□□□□□ -0.55
NUP50-219ENST00000497960 IGHV3-21A0A0B4J1V1 117 aa11.6□□□□□ -0.55
NUP50-219ENST00000497960 A8MZ25 164 aa11.6□□□□□ -0.55
NUP50-219ENST00000497960 DEFB114Q30KQ6 69 aa11.6□□□□□ -0.55
NUP50-219ENST00000497960 BSXQ3C1V8 233 aa11.6□□□□□ -0.55
NUP50-219ENST00000497960 NOXA1Q86UR1 476 aa11.6□□□□□ -0.55
NUP50-219ENST00000497960 MED28Q9H204 178 aa11.6□□□□□ -0.55
NUP50-219ENST00000497960 TUBA4BQ9H853 241 aa11.6□□□□□ -0.55
NUP50-219ENST00000497960 ZMAT4Q9H898 229 aa11.6□□□□□ -0.55
NUP50-219ENST00000497960 RCL1Q9Y2P8 373 aaKnown RBP11.6□□□□□ -0.55
NUP50-219ENST00000497960 A8MWP6 167 aa11.59□□□□□ -0.55
NUP50-219ENST00000497960 H3BP45 60 aa11.59□□□□□ -0.55
NUP50-219ENST00000497960 TGOLN2O43493 480 aa11.59□□□□□ -0.55
NUP50-219ENST00000497960 MBPP02686 304 aaPredicted RBP11.59□□□□□ -0.55
NUP50-219ENST00000497960 CBLN1P23435 193 aa11.59□□□□□ -0.55
NUP50-219ENST00000497960 OPRK1P41145 380 aa11.59□□□□□ -0.55
NUP50-219ENST00000497960 RPP30P78346 268 aaKnown RBP11.59□□□□□ -0.55
NUP50-219ENST00000497960 ID3Q02535 119 aa11.59□□□□□ -0.55
NUP50-219ENST00000497960 GUCA2BQ16661 112 aa11.59□□□□□ -0.55
NUP50-219ENST00000497960 C2orf83Q53S99 150 aa11.59□□□□□ -0.55
NUP50-219ENST00000497960 ATP6V0BQ99437 205 aa11.59□□□□□ -0.55
NUP50-219ENST00000497960 C19orf73Q9NVV2 129 aa11.59□□□□□ -0.55
NUP50-219ENST00000497960 C21orf62Q9NYP8 219 aa11.59□□□□□ -0.55
NUP50-219ENST00000497960 U3KQ87 197 aa11.59□□□□□ -0.55
NUP50-219ENST00000497960 IGHV3-35A0A0C4DH35 117 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 TMEM213A2RRL7 107 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 OR2T8A6NH00 312 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 K7EIM0 57 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 K7EPK0 472 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 L7N2F9 121 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 MT-CO2P00403 227 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 CD81P60033 236 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 RAB11AP62491 216 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 VAMP2P63027 116 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 SPSB3Q6PJ21 355 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 UBAC2Q8NBM4 344 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 SCARB1Q8WTV0 552 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 CACNG8Q8WXS5 425 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 MARC2Q969Z3 335 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 BSCL2Q96G97 398 aaPredicted RBP11.58□□□□□ -0.56
NUP50-219ENST00000497960 RCHY1Q96PM5 261 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 PSENENQ9NZ42 101 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 UFC1Q9Y3C8 167 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 STAB2Q8WWQ8 2551 aa11.58□□□□□ -0.56
NUP50-219ENST00000497960 RPS10-NUDT3A0A1W2PQS6 291 aa11.57□□□□□ -0.56
NUP50-219ENST00000497960 ZNF785A8K8V0 405 aa11.57□□□□□ -0.56
NUP50-219ENST00000497960 IFNA4P05014 189 aa11.57□□□□□ -0.56
NUP50-219ENST00000497960 PVALBP20472 110 aaPredicted RBP11.57□□□□□ -0.56
NUP50-219ENST00000497960 EDN2P20800 178 aa11.57□□□□□ -0.56
NUP50-219ENST00000497960 ELLP55199 621 aaPredicted RBP11.57□□□□□ -0.56
NUP50-219ENST00000497960 CYCSP99999 105 aaKnown RBP11.57□□□□□ -0.56
NUP50-219ENST00000497960 RAB32Q13637 225 aa11.57□□□□□ -0.56
NUP50-219ENST00000497960 FCN2Q15485 313 aa11.57□□□□□ -0.56
NUP50-219ENST00000497960 LRRC37A5PQ49AS3 106 aa11.57□□□□□ -0.56
NUP50-219ENST00000497960 TM4SF20Q53R12 229 aa11.57□□□□□ -0.56
NUP50-219ENST00000497960 Q56UQ5 140 aa11.57□□□□□ -0.56
NUP50-219ENST00000497960 SPANXN5Q5MJ07 72 aa11.57□□□□□ -0.56
NUP50-219ENST00000497960 UNQ9165/PRO28630Q6UXU0 137 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 440.2 ms