RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 DEFB4AO15263 64 aa13.29□□□□□ -0.28
ATPAF2-209ENST00000497871 CD3DP04234 171 aa13.29□□□□□ -0.28
ATPAF2-209ENST00000497871 MZT2AQ6P582 158 aa13.29□□□□□ -0.28
ATPAF2-209ENST00000497871 METTL26Q96S19 204 aa13.29□□□□□ -0.28
ATPAF2-209ENST00000497871 FNDC4Q9H6D8 234 aaPredicted RBP13.29□□□□□ -0.28
ATPAF2-209ENST00000497871 ENY2Q9NPA8 101 aa13.29□□□□□ -0.28
ATPAF2-209ENST00000497871 COPZ2Q9P299 210 aa13.29□□□□□ -0.28
ATPAF2-209ENST00000497871 VPS13DQ5THJ4 4388 aa13.29□□□□□ -0.28
ATPAF2-209ENST00000497871 FAM25AB3EWG3 89 aa13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 FAM25CB3EWG5 89 aa13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 FAM25GB3EWG6 89 aa13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 SCGB2A1O75556 95 aa13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 TBPP20226 339 aa13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 CRYBB3P26998 211 aa13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 OPRK1P41145 380 aa13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 HOXA1P49639 335 aaPredicted RBP13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 MLANAQ16655 118 aa13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 TRIM16LQ309B1 348 aa13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 SP6Q3SY56 376 aa13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 TMEM41BQ5BJD5 291 aa13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 OR52I2Q8NH67 350 aa13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 TERB2Q8NHR7 220 aa13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 ZFAND1Q8TCF1 268 aa13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 TMEM230Q96A57 120 aa13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 RRNAD1Q96FB5 475 aaKnown RBP13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 GRAMD2BQ96HH9 432 aa13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 MRPL36Q9P0J6 103 aaKnown RBP13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 MTFP1Q9UDX5 166 aa13.28□□□□□ -0.28
ATPAF2-209ENST00000497871 TRAV30A0A087WSZ9 112 aa13.27□□□□□ -0.29
ATPAF2-209ENST00000497871 K7EQG2 157 aa13.27□□□□□ -0.29
ATPAF2-209ENST00000497871 B3GALNT1O75752 331 aa13.27□□□□□ -0.29
ATPAF2-209ENST00000497871 BSXQ3C1V8 233 aa13.27□□□□□ -0.29
ATPAF2-209ENST00000497871 RNASE12Q5GAN4 147 aaKnown RBP13.27□□□□□ -0.29
ATPAF2-209ENST00000497871 TRPT1Q86TN4 253 aaKnown RBP13.27□□□□□ -0.29
ATPAF2-209ENST00000497871 CCDC71LQ8N9Z2 235 aa13.27□□□□□ -0.29
ATPAF2-209ENST00000497871 AP3S1Q92572 193 aa13.27□□□□□ -0.29
ATPAF2-209ENST00000497871 HRH4Q9H3N8 390 aa13.27□□□□□ -0.29
ATPAF2-209ENST00000497871 C11orf94C9JXX5 98 aa13.26□□□□□ -0.29
ATPAF2-209ENST00000497871 GIG44P09565 113 aaPredicted RBP13.26□□□□□ -0.29
ATPAF2-209ENST00000497871 SPP1P10451 314 aa13.26□□□□□ -0.29
ATPAF2-209ENST00000497871 UCP1P25874 307 aa13.26□□□□□ -0.29
ATPAF2-209ENST00000497871 P2RY1P47900 373 aa13.26□□□□□ -0.29
ATPAF2-209ENST00000497871 PPP5CP53041 499 aa13.26□□□□□ -0.29
ATPAF2-209ENST00000497871 MORN3Q6PF18 240 aaPredicted RBP13.26□□□□□ -0.29
ATPAF2-209ENST00000497871 Q8NAQ8 132 aa13.26□□□□□ -0.29
ATPAF2-209ENST00000497871 STXBP6Q8NFX7 210 aa13.26□□□□□ -0.29
ATPAF2-209ENST00000497871 C15orf40Q8WUR7 153 aa13.26□□□□□ -0.29
ATPAF2-209ENST00000497871 NARS2Q96I59 477 aaKnown RBP13.26□□□□□ -0.29
ATPAF2-209ENST00000497871 A0A0G2JRQ6 117 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 IGKV1-17P01599 117 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 ZNF182P17025 639 aaPredicted RBP13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 SPCS3P61009 180 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 PRR20EP86478 221 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 PRR20CP86479 221 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 PRR20DP86480 221 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 PRR20BP86481 221 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 PRR20AP86496 221 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 AARDQ4LEZ3 155 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 Q6ZRM9 215 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 FAM219AQ8IW50 185 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 TMEM229BQ8NBD8 167 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 OR4D10Q8NGI6 311 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 OR13C8Q8NGS7 320 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 OR52E5Q8NH55 327 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 DCANP1Q8TF63 244 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 ABHD1Q96SE0 405 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 EXTL2Q9UBQ6 330 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 APLNQ9ULZ1 77 aa13.25□□□□□ -0.29
ATPAF2-209ENST00000497871 RPS10-NUDT3A0A1W2PQS6 291 aa13.24□□□□□ -0.29
ATPAF2-209ENST00000497871 IGLL5B9A064 214 aa13.24□□□□□ -0.29
ATPAF2-209ENST00000497871 CDS2O95674 445 aa13.24□□□□□ -0.29
ATPAF2-209ENST00000497871 CD74P04233 296 aa13.24□□□□□ -0.29
ATPAF2-209ENST00000497871 RBMY1A1P0DJD3 496 aaKnown RBP13.24□□□□□ -0.29
ATPAF2-209ENST00000497871 RBMY1CP0DJD4 496 aa13.24□□□□□ -0.29
ATPAF2-209ENST00000497871 MIFP14174 115 aa13.24□□□□□ -0.29
ATPAF2-209ENST00000497871 HTR2BP41595 481 aa13.24□□□□□ -0.29
ATPAF2-209ENST00000497871 TAS2R19P59542 299 aa13.24□□□□□ -0.29
ATPAF2-209ENST00000497871 RBMY1FQ15415 496 aaKnown RBP13.24□□□□□ -0.29
ATPAF2-209ENST00000497871 TIGITQ495A1 244 aa13.24□□□□□ -0.29
ATPAF2-209ENST00000497871 SCGB2B2Q4G0G5 96 aa13.24□□□□□ -0.29
ATPAF2-209ENST00000497871 RNASE11Q8TAA1 199 aaKnown RBP13.24□□□□□ -0.29
ATPAF2-209ENST00000497871 U3KQE9 123 aa13.24□□□□□ -0.29
ATPAF2-209ENST00000497871 IGHV4-28A0A0C4DH34 117 aa13.23□□□□□ -0.29
ATPAF2-209ENST00000497871 ZNF705EA8MWA4 302 aaPredicted RBP13.23□□□□□ -0.29
ATPAF2-209ENST00000497871 RAB3DO95716 219 aa13.23□□□□□ -0.29
ATPAF2-209ENST00000497871 ZNF688P0C7X2 276 aa13.23□□□□□ -0.29
ATPAF2-209ENST00000497871 EIF2B2P49770 351 aaKnown RBP13.23□□□□□ -0.29
ATPAF2-209ENST00000497871 AP2S1P53680 142 aaPredicted RBP13.23□□□□□ -0.29
ATPAF2-209ENST00000497871 MARCH1Q8TCQ1 289 aa13.23□□□□□ -0.29
ATPAF2-209ENST00000497871 Q8WTZ3 238 aa13.23□□□□□ -0.29
ATPAF2-209ENST00000497871 TMEM222Q9H0R3 208 aa13.23□□□□□ -0.29
ATPAF2-209ENST00000497871 HERC2O95714 4834 aa13.23□□□□□ -0.29
ATPAF2-209ENST00000497871 HELTA6NFD8 242 aa13.22□□□□□ -0.29
ATPAF2-209ENST00000497871 KNCNA6PVL3 124 aa13.22□□□□□ -0.29
ATPAF2-209ENST00000497871 CTF1Q16619 201 aa13.22□□□□□ -0.29
ATPAF2-209ENST00000497871 ACTL10Q5JWF8 245 aa13.22□□□□□ -0.29
ATPAF2-209ENST00000497871 STEAP1BQ6NZ63 245 aa13.22□□□□□ -0.29
ATPAF2-209ENST00000497871 OR1S2Q8NGQ3 325 aa13.22□□□□□ -0.29
ATPAF2-209ENST00000497871 GLYATL2Q8WU03 294 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms