RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CTAG1AP78358 180 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 SIGLECL1Q8N7X8 197 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 Q8N814 137 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 SFT2D1Q8WV19 159 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 ARL5BQ96KC2 179 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 CCDC42Q96M95 316 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 MIXL1Q9H2W2 232 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 NHP2Q9NX24 153 aaKnown RBP0.79□□□□□ -2.28
PSPC1-205ENST00000497722 POLEQ07864 2286 aa0.78□□□□□ -2.28
PSPC1-205ENST00000497722 STRCQ7RTU9 1775 aa0.78□□□□□ -2.28
PSPC1-205ENST00000497722 OR4C46A6NHA9 309 aa0.78□□□□□ -2.28
PSPC1-205ENST00000497722 NIPSNAP2O75323 286 aa0.78□□□□□ -2.28
PSPC1-205ENST00000497722 RBP1P09455 135 aa0.78□□□□□ -2.28
PSPC1-205ENST00000497722 HIST1H1TP22492 207 aaPredicted RBP0.78□□□□□ -2.28
PSPC1-205ENST00000497722 RHOGP84095 191 aa0.78□□□□□ -2.28
PSPC1-205ENST00000497722 PRB3Q04118 309 aaPredicted RBP0.78□□□□□ -2.28
PSPC1-205ENST00000497722 OR2F1Q13607 317 aa0.78□□□□□ -2.28
PSPC1-205ENST00000497722 PTRHD1Q6GMV3 140 aaKnown RBP0.78□□□□□ -2.28
PSPC1-205ENST00000497722 TERB2Q8NHR7 220 aa0.78□□□□□ -2.28
PSPC1-205ENST00000497722 GPR146Q96CH1 333 aa0.78□□□□□ -2.28
PSPC1-205ENST00000497722 C6orf62Q9GZU0 229 aaPredicted RBP0.78□□□□□ -2.28
PSPC1-205ENST00000497722 RASL12Q9NYN1 266 aa0.78□□□□□ -2.28
PSPC1-205ENST00000497722 ZFP30Q9Y2G7 519 aa0.78□□□□□ -2.28
PSPC1-205ENST00000497722 TOPBP1Q92547 1522 aa0.78□□□□□ -2.28
PSPC1-205ENST00000497722 ALPK2Q86TB3 2170 aa0.77□□□□□ -2.29
PSPC1-205ENST00000497722 TRBV6-8A0A0A6YYG3 113 aa0.77□□□□□ -2.29
PSPC1-205ENST00000497722 C2orf70A6NJV1 201 aa0.77□□□□□ -2.29
PSPC1-205ENST00000497722 CASP1P29466 404 aa0.77□□□□□ -2.29
PSPC1-205ENST00000497722 SSR2P43308 183 aa0.77□□□□□ -2.29
PSPC1-205ENST00000497722 RPS20P60866 119 aaKnown RBP0.77□□□□□ -2.29
PSPC1-205ENST00000497722 YPEL3P61236 119 aaPredicted RBP0.77□□□□□ -2.29
PSPC1-205ENST00000497722 IMPG1Q17R60 797 aa0.77□□□□□ -2.29
PSPC1-205ENST00000497722 ACOT6Q3I5F7 207 aaPredicted RBP0.77□□□□□ -2.29
PSPC1-205ENST00000497722 ALKAL1Q6UXT8 129 aa0.77□□□□□ -2.29
PSPC1-205ENST00000497722 TRAPPC5Q8IUR0 188 aa0.77□□□□□ -2.29
PSPC1-205ENST00000497722 TMEM86BQ8N661 226 aa0.77□□□□□ -2.29
PSPC1-205ENST00000497722 LINC00526Q96FQ7 95 aa0.77□□□□□ -2.29
PSPC1-205ENST00000497722 C8orf76Q96K31 380 aa0.77□□□□□ -2.29
PSPC1-205ENST00000497722 OBSCN-AS1Q96MR7 158 aa0.77□□□□□ -2.29
PSPC1-205ENST00000497722 TP73-AS1Q9UF72 201 aa0.77□□□□□ -2.29
PSPC1-205ENST00000497722 PLB1Q6P1J6 1458 aa0.77□□□□□ -2.29
PSPC1-205ENST00000497722 RP1P56715 2156 aa0.76□□□□□ -2.29
PSPC1-205ENST00000497722 CCDC160A6NGH7 325 aa0.76□□□□□ -2.29
PSPC1-205ENST00000497722 C1orf196B1AJZ1 125 aa0.76□□□□□ -2.29
PSPC1-205ENST00000497722 RPP14O95059 124 aaKnown RBP0.76□□□□□ -2.29
PSPC1-205ENST00000497722 ANP32AP39687 249 aaKnown RBP0.76□□□□□ -2.29
PSPC1-205ENST00000497722 TEX261Q6UWH6 196 aa0.76□□□□□ -2.29
PSPC1-205ENST00000497722 PPP1R14BQ96C90 147 aa0.76□□□□□ -2.29
PSPC1-205ENST00000497722 PARD6GQ9BYG4 376 aaPredicted RBP0.76□□□□□ -2.29
PSPC1-205ENST00000497722 U3KQ87 197 aa0.76□□□□□ -2.29
PSPC1-205ENST00000497722 ADCY9O60503 1353 aa0.75□□□□□ -2.29
PSPC1-205ENST00000497722 NUP155O75694 1391 aa0.75□□□□□ -2.29
PSPC1-205ENST00000497722 TRAV3A0A0B4J244 114 aa0.75□□□□□ -2.29
PSPC1-205ENST00000497722 CLDN24A6NM45 220 aa0.75□□□□□ -2.29
PSPC1-205ENST00000497722 CHP2O43745 196 aa0.75□□□□□ -2.29
PSPC1-205ENST00000497722 OR2T1O43869 369 aa0.75□□□□□ -2.29
PSPC1-205ENST00000497722 MIFP14174 115 aa0.75□□□□□ -2.29
PSPC1-205ENST00000497722 CDC42P60953 191 aa0.75□□□□□ -2.29
PSPC1-205ENST00000497722 ITGB3BPQ13352 177 aaPredicted RBP0.75□□□□□ -2.29
PSPC1-205ENST00000497722 GDF5OSQ5U4N7 250 aa0.75□□□□□ -2.29
PSPC1-205ENST00000497722 CLECL1Q8IZS7 167 aa0.75□□□□□ -2.29
PSPC1-205ENST00000497722 CLDN22Q8N7P3 220 aa0.75□□□□□ -2.29
PSPC1-205ENST00000497722 C4orf3Q8WVX3 66 aa0.75□□□□□ -2.29
PSPC1-205ENST00000497722 BORCS5Q969J3 196 aa0.75□□□□□ -2.29
PSPC1-205ENST00000497722 BORCS7Q96B45 105 aa0.75□□□□□ -2.29
PSPC1-205ENST00000497722 TECTAO75443 2155 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 MTUS2Q5JR59 1369 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 MYO3BQ8WXR4 1341 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 LOC110117498A0A087WWA1 95 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 A0A087X0T9 212 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 TRAV26-2A0A0B4J265 109 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 BUB1B-PAK6H3BSN5 160 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 DNAL4O96015 105 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 RPS17P08708 135 aaKnown RBP0.74□□□□□ -2.29
PSPC1-205ENST00000497722 SMIM10L2AP0DMW4 78 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 SMIM10L2BP0DMW5 78 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 PDE6HQ13956 83 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 SPA17Q15506 151 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 RGS21Q2M5E4 152 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 FAM74A1Q5RGS3 127 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 OR6V1Q8N148 313 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 LINC00301Q8NCQ3 95 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 OR8J2Q8NGG1 315 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 OR13D1Q8NGV5 346 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 TEX47Q8TBZ9 253 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 ZNF418Q8TF45 676 aaPredicted RBP0.74□□□□□ -2.29
PSPC1-205ENST00000497722 CT55Q8WUE5 264 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 PATE1Q8WXA2 126 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 TSPAN32Q96QS1 320 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 TRIM4Q9C037 500 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 OR51V1Q9H2C8 321 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 CDC42SE1Q9NRR8 79 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 MRPL27Q9P0M9 148 aaKnown RBP0.74□□□□□ -2.29
PSPC1-205ENST00000497722 CYSLTR1Q9Y271 337 aa0.74□□□□□ -2.29
PSPC1-205ENST00000497722 UTP11Q9Y3A2 253 aaKnown RBP0.74□□□□□ -2.29
PSPC1-205ENST00000497722 DOCK5Q9H7D0 1870 aa0.73□□□□□ -2.29
PSPC1-205ENST00000497722 WRNQ14191 1432 aaPredicted RBP eCLIP0.73□□□□□ -2.29
PSPC1-205ENST00000497722 hCG_1818297A0A087WSY0 165 aa0.73□□□□□ -2.29
PSPC1-205ENST00000497722 C7orf71A4D174 169 aa0.73□□□□□ -2.29
PSPC1-205ENST00000497722 A8MT66 165 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms