RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 A0A1B0GX78 115 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 PHOX2AO14813 284 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 RBP1P09455 135 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 INAFM2P0DMQ5 153 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 ZNF32P17041 273 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 IL1RNP18510 177 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 G6PCP35575 357 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 AP1S1P61966 158 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 GPHB5Q86YW7 130 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 AMN1Q8IY45 258 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 EXOC3-AS1Q8N2X6 119 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 LMX1AQ8TE12 382 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 RMI2Q96E14 147 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 ZNF799Q96GE5 643 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 TSC22D3Q99576 134 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 PBOV1Q9GZY1 135 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 LHX9Q9NQ69 397 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 RASL12Q9NYN1 266 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 CYSLTR1Q9Y271 337 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 MYO15AQ9UKN7 3530 aa4.04□□□□□ -1.76
BRCA1-224ENST00000497488 DENND4CQ5VZ89 1909 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 ANAPC1Q9H1A4 1944 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 USP34Q70CQ2 3546 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 MYO16Q9Y6X6 1858 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 TRBV20OR9-2A0A075B6H5 130 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 IGKV3D-15A0A087WSY6 115 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 TRAV4A0A0B4J268 109 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 K7ERS5 55 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 PDYNP01213 254 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 CSN2P05814 226 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 PAEPP09466 180 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 CGB3P0DN86 165 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 CGB7P0DN87 165 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 PTHLHP12272 177 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 ATP5G3P48201 142 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 PSMD8P48556 350 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 RHEBQ15382 184 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 WDR59Q6PJI9 974 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 SCXQ7RTU7 201 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 ZFP62Q8NB50 900 aaPredicted RBP4.03□□□□□ -1.76
BRCA1-224ENST00000497488 SLC25A40Q8TBP6 338 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 MRPL30Q8TCC3 161 aaKnown RBP4.03□□□□□ -1.76
BRCA1-224ENST00000497488 ZNF675Q8TD23 568 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 CD200R1Q8TD46 325 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 SLC7A6Q92536 515 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 PLEKHB2Q96CS7 222 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 RBMXL1Q96E39 390 aaKnown RBP4.03□□□□□ -1.76
BRCA1-224ENST00000497488 MALSU1Q96EH3 234 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 WDR61Q9GZS3 305 aaKnown RBP4.03□□□□□ -1.76
BRCA1-224ENST00000497488 C11orf68Q9H3H3 251 aaKnown RBP4.03□□□□□ -1.76
BRCA1-224ENST00000497488 ZNF586Q9NXT0 402 aa4.03□□□□□ -1.76
BRCA1-224ENST00000497488 HELZP42694 1942 aaKnown RBP4.03□□□□□ -1.76
BRCA1-224ENST00000497488 ZNF638Q14966 1978 aaKnown RBP4.02□□□□□ -1.77
BRCA1-224ENST00000497488 PLXNB3Q9ULL4 1909 aa4.02□□□□□ -1.77
BRCA1-224ENST00000497488 TRBV19A0A075B6N1 114 aa4.02□□□□□ -1.77
BRCA1-224ENST00000497488 IGHV1-46P01743 117 aa4.02□□□□□ -1.77
BRCA1-224ENST00000497488 SMIM17P0DL12 118 aa4.02□□□□□ -1.77
BRCA1-224ENST00000497488 Q6Q795 121 aa4.02□□□□□ -1.77
BRCA1-224ENST00000497488 C11orf42Q8N5U0 333 aa4.02□□□□□ -1.77
BRCA1-224ENST00000497488 OR5P3Q8WZ94 311 aa4.02□□□□□ -1.77
BRCA1-224ENST00000497488 PHYHIPLQ96FC7 376 aa4.02□□□□□ -1.77
BRCA1-224ENST00000497488 HSPB9Q9BQS6 159 aa4.02□□□□□ -1.77
BRCA1-224ENST00000497488 CCDC32Q9BV29 185 aa4.02□□□□□ -1.77
BRCA1-224ENST00000497488 NKX6-2Q9C056 277 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-224ENST00000497488 GFRA4Q9GZZ7 299 aa4.02□□□□□ -1.77
BRCA1-224ENST00000497488 ASB4Q9Y574 426 aa4.02□□□□□ -1.77
BRCA1-224ENST00000497488 NCOR1O75376 2440 aa4.02□□□□□ -1.77
BRCA1-224ENST00000497488 A0A096LNJ9 63 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 TRBV6-6A0A0A6YYG2 114 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 C9JCJ5 164 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 CLDN25C9JDP6 229 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 NTF3P20783 257 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 RPS4Y1P22090 263 aaKnown RBP4.01□□□□□ -1.77
BRCA1-224ENST00000497488 AKR1C3P42330 323 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 MYL5Q02045 173 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 BAMBIQ13145 260 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 ENDOGQ14249 297 aaKnown RBP4.01□□□□□ -1.77
BRCA1-224ENST00000497488 LTC4SQ16873 150 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 TCF24Q7RTU0 167 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 H1FOOQ8IZA3 346 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-224ENST00000497488 C9orf106Q8NAJ2 232 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 OR11G2Q8NGC1 345 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 OR9Q1Q8NGQ5 310 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 CCDC115Q96NT0 180 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 OR2D2Q9H210 308 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 TVP23BQ9NYZ1 205 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 CELA1Q9UNI1 258 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 PHLDA3Q9Y5J5 127 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 YLPM1P49750 1951 aaKnown RBP4.01□□□□□ -1.77
BRCA1-224ENST00000497488 DMDP11532 3685 aa4.01□□□□□ -1.77
BRCA1-224ENST00000497488 KIAA1549LQ6ZVL6 1849 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 RIIAD1A6NNX1 92 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 LEUTXA8MZ59 168 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 IGLL5B9A064 214 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 PLA2G10O15496 165 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 CCNKO75909 580 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 PIAS1O75925 651 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 NRASP01111 189 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 HRASP01112 189 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 KRASP01116 189 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms