RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 DTD1Q8TEA8 209 aa4.21□□□□□ -1.74
GGPS1-208ENST00000497327 CIB3Q96Q77 187 aaPredicted RBP4.21□□□□□ -1.74
GGPS1-208ENST00000497327 TSNAXQ99598 290 aaKnown RBP4.21□□□□□ -1.74
GGPS1-208ENST00000497327 SLC25A31Q9H0C2 315 aa4.21□□□□□ -1.74
GGPS1-208ENST00000497327 ZNF430Q9H8G1 570 aaPredicted RBP4.21□□□□□ -1.74
GGPS1-208ENST00000497327 FKBP11Q9NYL4 201 aa4.21□□□□□ -1.74
GGPS1-208ENST00000497327 OR51B2Q9Y5P1 312 aa4.21□□□□□ -1.74
GGPS1-208ENST00000497327 GCN1Q92616 2671 aaKnown RBP4.21□□□□□ -1.74
GGPS1-208ENST00000497327 CRYBG3Q68DQ2 2970 aa4.21□□□□□ -1.74
GGPS1-208ENST00000497327 CSPG4Q6UVK1 2322 aa4.21□□□□□ -1.74
GGPS1-208ENST00000497327 PDZD2O15018 2839 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 TRAV40A0A0B4J280 105 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 A0A0U1RQK1 487 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 KANTRA0A1W2PQU2 76 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 CEBPZOSA8MTT3 80 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 E7EUB6 86 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 H3BP45 60 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 CST7O76096 145 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 TGFAP01135 160 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 IFNA17P01571 189 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 IGKV1D-33P01593 117 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 IGKV1-33P01594 117 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 SNRNP70P08621 437 aaKnown RBP4.2□□□□□ -1.74
GGPS1-208ENST00000497327 MDKP21741 143 aaPredicted RBP4.2□□□□□ -1.74
GGPS1-208ENST00000497327 CD24P25063 80 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 MAS1LP35410 378 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 AMTP48728 403 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 UBA52P62987 128 aaKnown RBP4.2□□□□□ -1.74
GGPS1-208ENST00000497327 EXOSC2Q13868 293 aaKnown RBP4.2□□□□□ -1.74
GGPS1-208ENST00000497327 VWC2Q2TAL6 325 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 SPINK9Q5DT21 86 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 SPANXN5Q5MJ07 72 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 C10orf55Q5SWW7 151 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 C9orf139Q6ZV77 190 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 PPP1R27Q86WC6 154 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 BAP18Q8IXM2 172 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 MMD2Q8IY49 270 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 CIARTQ8N365 385 aaPredicted RBP4.2□□□□□ -1.74
GGPS1-208ENST00000497327 UBAC2Q8NBM4 344 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 OR8H1Q8NGG4 311 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 OR5C1Q8NGR4 320 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 OR1L8Q8NGR8 309 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 TMED6Q8WW62 240 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 PHYHIPLQ96FC7 376 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 GINS3Q9BRX5 216 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 ZNF471Q9BX82 626 aaPredicted RBP4.2□□□□□ -1.74
GGPS1-208ENST00000497327 SMIM3Q9BZL3 60 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 CTDSP1Q9GZU7 261 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 FBXL15Q9H469 300 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 STRAPQ9Y3F4 350 aaKnown RBP4.2□□□□□ -1.74
GGPS1-208ENST00000497327 SOX21Q9Y651 276 aaPredicted RBP4.2□□□□□ -1.74
GGPS1-208ENST00000497327 NOTCH2Q04721 2471 aa4.2□□□□□ -1.74
GGPS1-208ENST00000497327 ITPR2Q14571 2701 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 ABCA1O95477 2261 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 IGHV3OR16-10A0A075B7F0 116 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 IGLC7A0M8Q6 106 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 SH2D7A6NKC9 451 aaPredicted RBP4.19□□□□□ -1.74
GGPS1-208ENST00000497327 TEX22C9J3V5 150 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 NBR2O15453 112 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 IFNA7P01567 189 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 OPN1MWP04001 364 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 METTL15P1P0C7V9 234 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 FAM157CP0CG43 387 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 FAM106CPP0CH98 169 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 OPN1MW2P0DN77 364 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 OPN1MW3P0DN78 364 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 RNASE2P10153 161 aaKnown RBP4.19□□□□□ -1.74
GGPS1-208ENST00000497327 TPT1P13693 172 aaKnown RBP4.19□□□□□ -1.74
GGPS1-208ENST00000497327 BRS3P32247 399 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 ATP5IP56385 69 aaPredicted RBP4.19□□□□□ -1.74
GGPS1-208ENST00000497327 BPIFB3P59826 476 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 WT1-ASQ06250 92 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 TMEM267Q0VDI3 215 aaPredicted RBP4.19□□□□□ -1.74
GGPS1-208ENST00000497327 AANATQ16613 207 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 ATP6V1FQ16864 119 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 C5orf64Q2M2E5 130 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 C2orf83Q53S99 150 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 CYB5R2Q6BCY4 276 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 ALKAL2Q6UX46 152 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 BRD3OSQ6XYD6 125 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 Q8N9W7 124 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 OR10W1Q8NGF6 305 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 OR1S2Q8NGQ3 325 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 ATP5SQ99766 215 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 PARD6GQ9BYG4 376 aaPredicted RBP4.19□□□□□ -1.74
GGPS1-208ENST00000497327 COMMD5Q9GZQ3 224 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 PLEKHA3Q9HB20 300 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 ZC4H2Q9NQZ6 224 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 METTL1Q9UBP6 276 aaKnown RBP4.19□□□□□ -1.74
GGPS1-208ENST00000497327 NUP50Q9UKX7 468 aa4.19□□□□□ -1.74
GGPS1-208ENST00000497327 ASH1LQ9NR48 2969 aaKnown RBP4.19□□□□□ -1.74
GGPS1-208ENST00000497327 BORCS7-ASMTA0A0B4J1R7 106 aa4.18□□□□□ -1.74
GGPS1-208ENST00000497327 A0A1W2PN81 502 aa4.18□□□□□ -1.74
GGPS1-208ENST00000497327 A6NDX4 124 aa4.18□□□□□ -1.74
GGPS1-208ENST00000497327 FGF16O43320 207 aa4.18□□□□□ -1.74
GGPS1-208ENST00000497327 DFFBO76075 338 aa4.18□□□□□ -1.74
GGPS1-208ENST00000497327 CA2P00918 260 aa4.18□□□□□ -1.74
GGPS1-208ENST00000497327 IFNA10P01566 189 aa4.18□□□□□ -1.74
GGPS1-208ENST00000497327 OR8U8P0C7N1 319 aa4.18□□□□□ -1.74
GGPS1-208ENST00000497327 SEC11BP0C7V7 166 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms