RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 PRSS22Q9GZN4 317 aa10.6□□□□□ -0.71
VEGFA-215ENST00000497139 TMEM14BQ9NUH8 114 aa10.6□□□□□ -0.71
VEGFA-215ENST00000497139 SPINT2O43291 252 aa10.6□□□□□ -0.71
VEGFA-215ENST00000497139 ZNF207O43670 478 aaKnown RBP10.6□□□□□ -0.71
VEGFA-215ENST00000497139 FABP6P51161 128 aa10.6□□□□□ -0.71
VEGFA-215ENST00000497139 RPL24P83731 157 aaKnown RBP10.6□□□□□ -0.71
VEGFA-215ENST00000497139 ZNF766Q5HY98 468 aa10.6□□□□□ -0.71
VEGFA-215ENST00000497139 TMEM108Q6UXF1 575 aa10.6□□□□□ -0.71
VEGFA-215ENST00000497139 ADAMTSL5Q6ZMM2 481 aa10.6□□□□□ -0.71
VEGFA-215ENST00000497139 ZNF329Q86UD4 541 aa10.6□□□□□ -0.71
VEGFA-215ENST00000497139 TEX50A0A1B0GTY4 177 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 RAB9AP51151 201 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 CKS1BP61024 79 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 MRPL14Q6P1L8 145 aaKnown RBP10.59□□□□□ -0.71
VEGFA-215ENST00000497139 RBPMS2Q6ZRY4 209 aaKnown RBP10.59□□□□□ -0.71
VEGFA-215ENST00000497139 FAM167A-AS1Q96KT0 104 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 DNAH14Q0VDD8 3507 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 A0A096LPE4 126 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 A0A1W2PPZ6 126 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 GOSR1O95249 250 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 GUSBP1Q15486 140 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 SAMD5Q5TGI4 173 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 Q6ZR03 302 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 Q6ZS52 159 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 S100A7AQ86SG5 101 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 YRDCQ86U90 279 aaKnown RBP10.59□□□□□ -0.71
VEGFA-215ENST00000497139 WFDC12Q8WWY7 111 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 PERPQ96FX8 193 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 COQ2Q96H96 371 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 ZNF714Q96N38 554 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 S1PR3Q99500 378 aa10.59□□□□□ -0.71
VEGFA-215ENST00000497139 IGHV1-45A0A0A0MS14 117 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 C3orf80F5H4A9 247 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 CHEK1O14757 476 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 CT45A6P0DMU7 189 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 CT45A5P0DMU8 189 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 CT45A7P0DMV0 189 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 LGALS9BQ3B8N2 356 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 CT45A1Q5HYN5 189 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 Q5PR19 223 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 TMEM164Q5U3C3 297 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 LGALS9CQ6DKI2 356 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 TSTD1Q8NFU3 115 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 CT45A3Q8NHU0 189 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 NEU4Q8WWR8 484 aaPredicted RBP10.58□□□□□ -0.72
VEGFA-215ENST00000497139 IMMP1LQ96LU5 166 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 FER1L6-AS2Q96M78 137 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 SLC25A2Q9BXI2 301 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 AP5S1Q9NUS5 200 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 KLF12Q9Y4X4 402 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 DIDO1Q9BTC0 2240 aaKnown RBP10.58□□□□□ -0.72
VEGFA-215ENST00000497139 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.58□□□□□ -0.72
VEGFA-215ENST00000497139 A6NJY4 79 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 F8W1H4 67 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 NXPH1P58417 271 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 FAM222BQ8WU58 562 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 MRAP2Q96G30 205 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 THYN1Q9P016 225 aa10.58□□□□□ -0.72
VEGFA-215ENST00000497139 SMIM13P0DJ93 91 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 AESQ08117 197 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 BLNKQ8WV28 456 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 LINC00479Q96M42 142 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 JPT1Q9UK76 154 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 TRAV3A0A0B4J244 114 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 ZNF503-AS2A6NEH8 195 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 HAX1O00165 279 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 IGHV3-9P01782 118 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 LINC00205P59089 165 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 FAM53AQ6NSI3 398 aaPredicted RBP10.57□□□□□ -0.72
VEGFA-215ENST00000497139 GPR82Q96P67 336 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 VGLL1Q99990 258 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 TMUB1Q9BVT8 246 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 TSSC4Q9Y5U2 329 aaPredicted RBP10.57□□□□□ -0.72
VEGFA-215ENST00000497139 ESPL1Q14674 2120 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 C19orf67A6NJJ6 358 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 SRRM4A7MD48 611 aaKnown RBP10.57□□□□□ -0.72
VEGFA-215ENST00000497139 PROP1O75360 226 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 CT45A10P0DMU9 189 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 MC5RP33032 325 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 MEF2CQ06413 473 aaPredicted RBP10.57□□□□□ -0.72
VEGFA-215ENST00000497139 RLN3Q8WXF3 142 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 ABHD17AQ96GS6 310 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 MLST8Q9BVC4 326 aa10.57□□□□□ -0.72
VEGFA-215ENST00000497139 HCFC1P51610 2035 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 TET2Q6N021 2002 aaPredicted RBP10.56□□□□□ -0.72
VEGFA-215ENST00000497139 IGHV1OR15-9A0A0B4J2B8 117 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 C15orf65H3BRN8 121 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 MGST3O14880 152 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 P01737 135 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 IGHV3-7P01780 117 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 FOXE3Q13461 319 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 C2orf83Q53S99 150 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 ZADH2Q8N4Q0 377 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 GATD1Q8NB37 220 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 OR1L4Q8NGR5 311 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 DUSP23Q9BVJ7 150 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 C19orf71A6NCJ1 209 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 H0Y8G0 127 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 CELA2AP08217 269 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 MYCNOSP40205 109 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms