RNA–Protein interactions for RNA: ENST00000496804.5

MACF1-224, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 5,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-224ENST00000496804 RPL39P5Q59GN2 51 aa7.33□□□□□ -1.24
MACF1-224ENST00000496804 SPANXN1Q5VSR9 72 aa7.33□□□□□ -1.24
MACF1-224ENST00000496804 SPACA3Q8IXA5 215 aa7.33□□□□□ -1.24
MACF1-224ENST00000496804 SYT8Q8NBV8 401 aa7.33□□□□□ -1.24
MACF1-224ENST00000496804 C1QTNF5Q9BXJ0 243 aa7.33□□□□□ -1.24
MACF1-224ENST00000496804 KLK15Q9H2R5 256 aa7.33□□□□□ -1.24
MACF1-224ENST00000496804 APELAP0DMC3 54 aa7.33□□□□□ -1.24
MACF1-224ENST00000496804 MPV17P39210 176 aa7.33□□□□□ -1.24
MACF1-224ENST00000496804 LEPP41159 167 aa7.33□□□□□ -1.24
MACF1-224ENST00000496804 CHAC1Q9BUX1 264 aa7.33□□□□□ -1.24
MACF1-224ENST00000496804 REPIN1Q9BWE0 567 aaKnown RBP7.33□□□□□ -1.24
MACF1-224ENST00000496804 LSM4Q9Y4Z0 139 aaKnown RBP7.33□□□□□ -1.24
MACF1-224ENST00000496804 ALPK3Q96L96 1907 aa7.33□□□□□ -1.24
MACF1-224ENST00000496804 ETV2O00321 342 aaPredicted RBP7.33□□□□□ -1.24
MACF1-224ENST00000496804 TMEM92Q6UXU6 159 aa7.33□□□□□ -1.24
MACF1-224ENST00000496804 PLSCR4Q9NRQ2 329 aa7.33□□□□□ -1.24
MACF1-224ENST00000496804 SPANXA1Q9NS26 97 aa7.33□□□□□ -1.24
MACF1-224ENST00000496804 IGKV3D-11A0A0A0MRZ8 115 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 A0A1W2PRD5 423 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 A0A1W2PRF3 423 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 A0A1W2PRM7 423 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 PTGDSP41222 190 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 GAGE5Q13069 117 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 GAGE6Q13070 117 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 EBLN2Q6P2I7 272 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 MDP1Q86V88 176 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 SLC25A2Q9BXI2 301 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 NPFFR1Q9GZQ6 430 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 RAXQ9Y2V3 346 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 TRBV20OR9-2A0A075B6H5 130 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 IGHV1-24A0A0C4DH33 117 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 F5H697 171 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 NDUFA3O95167 84 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 MOSP00540 346 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 PRTN3P24158 256 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 SRXN1Q9BYN0 137 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 LRRK1Q38SD2 2015 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 LTBP1Q14766 1721 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 LYZL6O75951 148 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 NTF4P34130 210 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 VGLL1Q99990 258 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 RPP25Q9BUL9 199 aaKnown RBP7.32□□□□□ -1.24
MACF1-224ENST00000496804 ZSWIM8A7E2V4 1837 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 POLR2AP24928 1970 aaKnown RBP7.32□□□□□ -1.24
MACF1-224ENST00000496804 C15orf62A8K5M9 175 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 B5MCH6 92 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 CELA3AP09093 270 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 SP9P0CG40 484 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 RPL11P62913 178 aaKnown RBP7.32□□□□□ -1.24
MACF1-224ENST00000496804 HCP5Q6MZN7 132 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 GTSCR1Q86UQ5 136 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 LINC00470Q9BZP3 86 aa7.32□□□□□ -1.24
MACF1-224ENST00000496804 KLF13Q9Y2Y9 288 aaPredicted RBP7.32□□□□□ -1.24
MACF1-224ENST00000496804 CRYGSP22914 178 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.31□□□□□ -1.24
MACF1-224ENST00000496804 ZNF497Q6ZNH5 498 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 MDC1Q14676 2089 aaKnown RBP7.31□□□□□ -1.24
MACF1-224ENST00000496804 TRAV8-4A0A0B4J246 113 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 SNRNP200O75643 2136 aaKnown RBP7.31□□□□□ -1.24
MACF1-224ENST00000496804 TMEM178AQ8NBL3 297 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 MBNL3Q9NUK0 354 aaKnown RBP7.31□□□□□ -1.24
MACF1-224ENST00000496804 TPRP12270 2363 aaKnown RBP7.31□□□□□ -1.24
MACF1-224ENST00000496804 IGHV3OR15-7A0A075B7D8 119 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 VWC2Q2TAL6 325 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 SLC25A48Q6ZT89 311 aaKnown RBP7.31□□□□□ -1.24
MACF1-224ENST00000496804 ZIC4Q8N9L1 334 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 SVIPQ8NHG7 77 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 Q9H3A6 140 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 LTBP4Q8N2S1 1624 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 SMIM27A0A1W2PRY6 76 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 M0R1B8 84 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 MGPP08493 103 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 LGALS3P17931 250 aaKnown RBP7.31□□□□□ -1.24
MACF1-224ENST00000496804 SLC25A53Q5H9E4 307 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 KLF17Q5JT82 389 aaPredicted RBP7.31□□□□□ -1.24
MACF1-224ENST00000496804 ASCL4Q6XD76 172 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 SLC22A18ASQ8N1D0 253 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 KIR3DL3Q8N743 410 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 CACNG8Q8WXS5 425 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 ARPC1AQ92747 370 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 LEAP2Q969E1 77 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 CALYQ9NYX4 217 aa7.31□□□□□ -1.24
MACF1-224ENST00000496804 SHANK1Q9Y566 2161 aa7.3□□□□□ -1.24
MACF1-224ENST00000496804 ANOS1P23352 680 aa7.3□□□□□ -1.24
MACF1-224ENST00000496804 REG1BP48304 166 aa7.3□□□□□ -1.24
MACF1-224ENST00000496804 RHOGP84095 191 aa7.3□□□□□ -1.24
MACF1-224ENST00000496804 TFF2Q03403 129 aa7.3□□□□□ -1.24
MACF1-224ENST00000496804 SMPXQ9UHP9 88 aa7.3□□□□□ -1.24
MACF1-224ENST00000496804 MED12Q93074 2177 aa7.3□□□□□ -1.24
MACF1-224ENST00000496804 TRAV8-1A0A0A6YYK1 113 aa7.3□□□□□ -1.24
MACF1-224ENST00000496804 A0A1W2PQF6 199 aa7.3□□□□□ -1.24
MACF1-224ENST00000496804 CIARTQ8N365 385 aaPredicted RBP7.3□□□□□ -1.24
MACF1-224ENST00000496804 GCSAMQ8N6F7 178 aa7.3□□□□□ -1.24
MACF1-224ENST00000496804 ZC2HC1AQ96GY0 325 aa7.3□□□□□ -1.24
MACF1-224ENST00000496804 FNDC1Q4ZHG4 1894 aaPredicted RBP7.3□□□□□ -1.24
MACF1-224ENST00000496804 FAM90A9PA6NNJ1 464 aa7.3□□□□□ -1.24
MACF1-224ENST00000496804 C15orf61A6NNL5 157 aa7.3□□□□□ -1.24
MACF1-224ENST00000496804 E9PLN8 166 aa7.3□□□□□ -1.24
MACF1-224ENST00000496804 K7EN84 100 aa7.3□□□□□ -1.24
MACF1-224ENST00000496804 NKX2-8O15522 239 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms