RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, human

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-216	ENST00000496738	SLC38A11	Q08AI6	406 aa		13.43	□□□□□ -0.26
LMNA-216	ENST00000496738	LY6E	Q16553	131 aa		13.43	□□□□□ -0.26
LMNA-216	ENST00000496738	C19orf35	Q6ZS72	473 aa		13.43	□□□□□ -0.26
LMNA-216	ENST00000496738	HSD17B11	Q8NBQ5	300 aa		13.43	□□□□□ -0.26
LMNA-216	ENST00000496738	PIFO	Q8TCI5	191 aa		13.43	□□□□□ -0.26
LMNA-216	ENST00000496738	PLXNB1	O43157	2135 aa		13.43	□□□□□ -0.26
LMNA-216	ENST00000496738	SH2D7	A6NKC9	451 aa	Predicted RBP	13.43	□□□□□ -0.26
LMNA-216	ENST00000496738	PMS2P5	A8MQ11	134 aa		13.43	□□□□□ -0.26
LMNA-216	ENST00000496738		H3BUX3	64 aa		13.43	□□□□□ -0.26
LMNA-216	ENST00000496738	NPY1R	P25929	384 aa		13.43	□□□□□ -0.26
LMNA-216	ENST00000496738	EIF5A	P63241	154 aa	Known RBP	13.43	□□□□□ -0.26
LMNA-216	ENST00000496738	FAM103A1	Q9BTL3	118 aa	Known RBP	13.43	□□□□□ -0.26
LMNA-216	ENST00000496738	MEGF9	Q9H1U4	602 aa		13.43	□□□□□ -0.26
LMNA-216	ENST00000496738	TREM1	Q9NP99	234 aa		13.43	□□□□□ -0.26
LMNA-216	ENST00000496738	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.43	□□□□□ -0.26
LMNA-216	ENST00000496738	FGF16	O43320	207 aa		13.42	□□□□□ -0.26
LMNA-216	ENST00000496738	JTB	O76095	146 aa		13.42	□□□□□ -0.26
LMNA-216	ENST00000496738	OR13C7	P0DN81	318 aa		13.42	□□□□□ -0.26
LMNA-216	ENST00000496738	AREG	P15514	252 aa		13.42	□□□□□ -0.26
LMNA-216	ENST00000496738	HBG1	P69891	147 aa		13.42	□□□□□ -0.26
LMNA-216	ENST00000496738	HBG2	P69892	147 aa		13.42	□□□□□ -0.26
LMNA-216	ENST00000496738	DEFB112	Q30KQ8	113 aa		13.42	□□□□□ -0.26
LMNA-216	ENST00000496738	SRSF12	Q8WXF0	261 aa	Known RBP	13.42	□□□□□ -0.26
LMNA-216	ENST00000496738	ATP5S	Q99766	215 aa		13.42	□□□□□ -0.26
LMNA-216	ENST00000496738	RFNG	Q9Y644	331 aa		13.42	□□□□□ -0.26
LMNA-216	ENST00000496738	CREBBP	Q92793	2442 aa		13.42	□□□□□ -0.26
LMNA-216	ENST00000496738	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.42	□□□□□ -0.26
LMNA-216	ENST00000496738	SEC14L6	B5MCN3	397 aa		13.42	□□□□□ -0.26
LMNA-216	ENST00000496738	FBXO24	O75426	580 aa		13.42	□□□□□ -0.26
LMNA-216	ENST00000496738	SNCA	P37840	140 aa		13.42	□□□□□ -0.26
LMNA-216	ENST00000496738		Q8N9W7	124 aa		13.42	□□□□□ -0.26
LMNA-216	ENST00000496738	OR10P1	Q8NGE3	313 aa		13.42	□□□□□ -0.26
LMNA-216	ENST00000496738	ABCA1	O95477	2261 aa		13.42	□□□□□ -0.26
LMNA-216	ENST00000496738		A0A1W2PN81	502 aa		13.41	□□□□□ -0.26
LMNA-216	ENST00000496738	MAS1L	P35410	378 aa		13.41	□□□□□ -0.26
LMNA-216	ENST00000496738	CHRNA7	P36544	502 aa		13.41	□□□□□ -0.26
LMNA-216	ENST00000496738	LRRC75B	Q2VPJ9	315 aa		13.41	□□□□□ -0.26
LMNA-216	ENST00000496738	SSMEM1	Q8WWF3	244 aa		13.41	□□□□□ -0.26
LMNA-216	ENST00000496738	UBE2L5P	A0A1B0GUS4	154 aa		13.41	□□□□□ -0.26
LMNA-216	ENST00000496738	IGLC7	A0M8Q6	106 aa		13.41	□□□□□ -0.26
LMNA-216	ENST00000496738	FXYD3	Q14802	87 aa		13.41	□□□□□ -0.26
LMNA-216	ENST00000496738	ZFHX3	Q15911	3703 aa		13.41	□□□□□ -0.26
LMNA-216	ENST00000496738	SH3BGRL3	Q9H299	93 aa		13.41	□□□□□ -0.26
LMNA-216	ENST00000496738	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.4	□□□□□ -0.26
LMNA-216	ENST00000496738	TEX22	C9J3V5	150 aa		13.4	□□□□□ -0.26
LMNA-216	ENST00000496738	FSHB	P01225	129 aa		13.4	□□□□□ -0.26
LMNA-216	ENST00000496738	ERH	P84090	104 aa	Known RBP	13.4	□□□□□ -0.26
LMNA-216	ENST00000496738	RUNX1	Q01196	453 aa		13.4	□□□□□ -0.26
LMNA-216	ENST00000496738	ABHD5	Q8WTS1	349 aa		13.4	□□□□□ -0.26
LMNA-216	ENST00000496738	SLC25A33	Q9BSK2	321 aa		13.4	□□□□□ -0.26
LMNA-216	ENST00000496738	TNFRSF19	Q9NS68	423 aa		13.4	□□□□□ -0.26
LMNA-216	ENST00000496738	FLNA	P21333	2647 aa	Known RBP	13.4	□□□□□ -0.26
LMNA-216	ENST00000496738	RNASE2	P10153	161 aa	Known RBP	13.4	□□□□□ -0.26
LMNA-216	ENST00000496738	BMI1	P35226	326 aa		13.4	□□□□□ -0.26
LMNA-216	ENST00000496738	RAB11A	P62491	216 aa		13.4	□□□□□ -0.26
LMNA-216	ENST00000496738	CX3CL1	P78423	397 aa		13.4	□□□□□ -0.26
LMNA-216	ENST00000496738	NDP	Q00604	133 aa		13.4	□□□□□ -0.26
LMNA-216	ENST00000496738	RASL11B	Q9BPW5	248 aa		13.4	□□□□□ -0.26
LMNA-216	ENST00000496738	C1RL	Q9NZP8	487 aa		13.4	□□□□□ -0.26
LMNA-216	ENST00000496738	KRTAP1-1	Q07627	177 aa		13.39	□□□□□ -0.27
LMNA-216	ENST00000496738	KIAA0141	Q14154	515 aa	Predicted RBP	13.39	□□□□□ -0.27
LMNA-216	ENST00000496738	ZNF266	Q14584	549 aa		13.39	□□□□□ -0.27
LMNA-216	ENST00000496738	HSPB9	Q9BQS6	159 aa		13.39	□□□□□ -0.27
LMNA-216	ENST00000496738	TEX15	Q9BXT5	2789 aa		13.39	□□□□□ -0.27
LMNA-216	ENST00000496738	SMCO3	A2RU48	225 aa		13.39	□□□□□ -0.27
LMNA-216	ENST00000496738		M0R143	59 aa		13.39	□□□□□ -0.27
LMNA-216	ENST00000496738	DFFB	O76075	338 aa		13.39	□□□□□ -0.27
LMNA-216	ENST00000496738	EIF5AL1	Q6IS14	154 aa	Known RBP	13.39	□□□□□ -0.27
LMNA-216	ENST00000496738	IL34	Q6ZMJ4	242 aa		13.39	□□□□□ -0.27
LMNA-216	ENST00000496738	RNASE8	Q8TDE3	154 aa	Known RBP	13.39	□□□□□ -0.27
LMNA-216	ENST00000496738	RNF141	Q8WVD5	230 aa		13.38	□□□□□ -0.27
LMNA-216	ENST00000496738	PINX1	Q96BK5	328 aa	Known RBP	13.38	□□□□□ -0.27
LMNA-216	ENST00000496738	P2RX4	Q99571	388 aa		13.38	□□□□□ -0.27
LMNA-216	ENST00000496738	TMEM231	Q9H6L2	316 aa		13.38	□□□□□ -0.27
LMNA-216	ENST00000496738	SEPSECS	Q9HD40	501 aa	Known RBP	13.38	□□□□□ -0.27
LMNA-216	ENST00000496738	FBXO7	Q9Y3I1	522 aa		13.38	□□□□□ -0.27
LMNA-216	ENST00000496738	PRSS46	E5RG02	174 aa		13.38	□□□□□ -0.27
LMNA-216	ENST00000496738	IFNA5	P01569	189 aa		13.38	□□□□□ -0.27
LMNA-216	ENST00000496738	IGHV4-59	P01825	116 aa		13.38	□□□□□ -0.27
LMNA-216	ENST00000496738	BSX	Q3C1V8	233 aa		13.38	□□□□□ -0.27
LMNA-216	ENST00000496738	ARPC1A	Q92747	370 aa		13.38	□□□□□ -0.27
LMNA-216	ENST00000496738	IGHV7-81	A0A0B4J1V7	117 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	FGF7	P21781	194 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	MLANA	Q16655	118 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	C2orf83	Q53S99	150 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	C5orf56	Q8N8D9	126 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	GINS3	Q9BRX5	216 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	TMEM147	Q9BVK8	224 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	YAE1D1	Q9NRH1	226 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	DOK5	Q9P104	306 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	MOB4	Q9Y3A3	225 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	CSPG4	Q6UVK1	2322 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	AKAP9	Q99996	3911 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	ATP6V0C	P27449	155 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	ZNF562	Q6V9R5	426 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	ZNF664	Q8N3J9	261 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	SMR3A	Q99954	134 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	RSG1	Q9BU20	258 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	ARV1	Q9H2C2	271 aa		13.37	□□□□□ -0.27
LMNA-216	ENST00000496738	RPS10P5	Q9NQ39	176 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms