RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 K7EMT4 169 aa12.11□□□□□ -0.47
DNMT3A-215ENST00000496570 CORTO00230 105 aa12.11□□□□□ -0.47
DNMT3A-215ENST00000496570 CD7P09564 240 aa12.11□□□□□ -0.47
DNMT3A-215ENST00000496570 HTR2BP41595 481 aa12.11□□□□□ -0.47
DNMT3A-215ENST00000496570 INPP1P49441 399 aa12.11□□□□□ -0.47
DNMT3A-215ENST00000496570 SUB1P53999 127 aaKnown RBP eCLIP12.11□□□□□ -0.47
DNMT3A-215ENST00000496570 UBE2MP61081 183 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-215ENST00000496570 C7orf50Q9BRJ6 194 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-215ENST00000496570 RBKSQ9H477 322 aa12.11□□□□□ -0.47
DNMT3A-215ENST00000496570 HEYLQ9NQ87 328 aaPredicted RBP12.11□□□□□ -0.47
DNMT3A-215ENST00000496570 STAB2Q8WWQ8 2551 aa12.1□□□□□ -0.47
DNMT3A-215ENST00000496570 C9orf170A2RU37 121 aa12.1□□□□□ -0.47
DNMT3A-215ENST00000496570 C15orf62A8K5M9 175 aa12.1□□□□□ -0.47
DNMT3A-215ENST00000496570 NUPL2O15504 423 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-215ENST00000496570 ZNF207O43670 478 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-215ENST00000496570 TMEM50AO95807 157 aa12.1□□□□□ -0.47
DNMT3A-215ENST00000496570 NHLRC4P0CG21 123 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-215ENST00000496570 LINC00299Q6ZSB3 139 aa12.1□□□□□ -0.47
DNMT3A-215ENST00000496570 DUSP18Q8NEJ0 188 aa12.1□□□□□ -0.47
DNMT3A-215ENST00000496570 SLC24A4Q8NFF2 622 aa12.1□□□□□ -0.47
DNMT3A-215ENST00000496570 GNG7O60262 68 aa12.09□□□□□ -0.47
DNMT3A-215ENST00000496570 SLC25A6P12236 298 aa12.09□□□□□ -0.47
DNMT3A-215ENST00000496570 OPRK1P41145 380 aa12.09□□□□□ -0.47
DNMT3A-215ENST00000496570 NPBWR1P48145 328 aa12.09□□□□□ -0.47
DNMT3A-215ENST00000496570 RELQ04864 619 aaPredicted RBP12.09□□□□□ -0.47
DNMT3A-215ENST00000496570 GTSCR1Q86UQ5 136 aa12.09□□□□□ -0.47
DNMT3A-215ENST00000496570 OR4X1Q8NH49 305 aa12.09□□□□□ -0.47
DNMT3A-215ENST00000496570 NEURL2Q9BR09 285 aa12.09□□□□□ -0.47
DNMT3A-215ENST00000496570 C20orf24Q9BUV8 137 aa12.09□□□□□ -0.47
DNMT3A-215ENST00000496570 WFDC10AQ9H1F0 79 aa12.09□□□□□ -0.47
DNMT3A-215ENST00000496570 ZFAND3Q9H8U3 227 aa12.09□□□□□ -0.47
DNMT3A-215ENST00000496570 CACFD1Q9UGQ2 172 aa12.09□□□□□ -0.47
DNMT3A-215ENST00000496570 LYRM1O43325 122 aa12.08□□□□□ -0.48
DNMT3A-215ENST00000496570 CLN5O75503 358 aa12.08□□□□□ -0.48
DNMT3A-215ENST00000496570 SCAF4O95104 1147 aaKnown RBP12.08□□□□□ -0.48
DNMT3A-215ENST00000496570 ANXA7P20073 488 aaKnown RBP12.08□□□□□ -0.48
DNMT3A-215ENST00000496570 CD81P60033 236 aa12.08□□□□□ -0.48
DNMT3A-215ENST00000496570 DHRS2Q13268 280 aa12.08□□□□□ -0.48
DNMT3A-215ENST00000496570 GUCA2BQ16661 112 aa12.08□□□□□ -0.48
DNMT3A-215ENST00000496570 TOMM20LQ6UXN7 152 aa12.08□□□□□ -0.48
DNMT3A-215ENST00000496570 LINC00322Q6ZN03 302 aaPredicted RBP12.08□□□□□ -0.48
DNMT3A-215ENST00000496570 OR1S1Q8NH92 325 aa12.08□□□□□ -0.48
DNMT3A-215ENST00000496570 RNASEH2CQ8TDP1 164 aaKnown RBP12.08□□□□□ -0.48
DNMT3A-215ENST00000496570 DTD1Q8TEA8 209 aa12.08□□□□□ -0.48
DNMT3A-215ENST00000496570 CCDC32Q9BV29 185 aa12.08□□□□□ -0.48
DNMT3A-215ENST00000496570 SMPXQ9UHP9 88 aa12.08□□□□□ -0.48
DNMT3A-215ENST00000496570 TMED3Q9Y3Q3 217 aa12.08□□□□□ -0.48
DNMT3A-215ENST00000496570 TRAV25A0A0B4J276 109 aa12.07□□□□□ -0.48
DNMT3A-215ENST00000496570 CENPXA8MT69 81 aa12.07□□□□□ -0.48
DNMT3A-215ENST00000496570 ADAP1O75689 374 aa12.07□□□□□ -0.48
DNMT3A-215ENST00000496570 IGKV1-17P01599 117 aa12.07□□□□□ -0.48
DNMT3A-215ENST00000496570 HOXB5P09067 269 aa12.07□□□□□ -0.48
DNMT3A-215ENST00000496570 OR4E1P0C645 316 aa12.07□□□□□ -0.48
DNMT3A-215ENST00000496570 NPY1RP25929 384 aa12.07□□□□□ -0.48
DNMT3A-215ENST00000496570 GGNBP1Q5YKI7 109 aa12.07□□□□□ -0.48
DNMT3A-215ENST00000496570 PRSS54Q6PEW0 395 aa12.07□□□□□ -0.48
DNMT3A-215ENST00000496570 LYG2Q86SG7 212 aa12.07□□□□□ -0.48
DNMT3A-215ENST00000496570 TMEM116Q8NCL8 245 aa12.07□□□□□ -0.48
DNMT3A-215ENST00000496570 HIPK2Q9H2X6 1198 aa12.07□□□□□ -0.48
DNMT3A-215ENST00000496570 PIGBOS1A0A0B4J2F0 54 aa12.06□□□□□ -0.48
DNMT3A-215ENST00000496570 IGHV7-4-1A0A0J9YVY3 117 aa12.06□□□□□ -0.48
DNMT3A-215ENST00000496570 MPTX1A8MV57 137 aa12.06□□□□□ -0.48
DNMT3A-215ENST00000496570 CHEK1O14757 476 aa12.06□□□□□ -0.48
DNMT3A-215ENST00000496570 ZNF600Q6ZNG1 722 aa12.06□□□□□ -0.48
DNMT3A-215ENST00000496570 DEFB125Q8N687 156 aa12.06□□□□□ -0.48
DNMT3A-215ENST00000496570 TM2D3Q9BRN9 247 aa12.06□□□□□ -0.48
DNMT3A-215ENST00000496570 TBC1D24Q9ULP9 559 aa12.06□□□□□ -0.48
DNMT3A-215ENST00000496570 PUS1Q9Y606 427 aaKnown RBP eCLIP12.06□□□□□ -0.48
DNMT3A-215ENST00000496570 U3KQ87 197 aa12.06□□□□□ -0.48
DNMT3A-215ENST00000496570 U3KQK5 164 aa12.06□□□□□ -0.48
DNMT3A-215ENST00000496570 IGHV3-49A0A0A0MS15 119 aa12.05□□□□□ -0.48
DNMT3A-215ENST00000496570 FAM90A26D6RGX4 464 aa12.05□□□□□ -0.48
DNMT3A-215ENST00000496570 TSPAN4O14817 238 aa12.05□□□□□ -0.48
DNMT3A-215ENST00000496570 YIF1AO95070 293 aa12.05□□□□□ -0.48
DNMT3A-215ENST00000496570 APOHP02749 345 aaPredicted RBP12.05□□□□□ -0.48
DNMT3A-215ENST00000496570 IGLC1P0CG04 106 aa12.05□□□□□ -0.48
DNMT3A-215ENST00000496570 RND2P52198 227 aa12.05□□□□□ -0.48
DNMT3A-215ENST00000496570 TIGITQ495A1 244 aa12.05□□□□□ -0.48
DNMT3A-215ENST00000496570 LILRB2Q8N423 598 aa12.05□□□□□ -0.48
DNMT3A-215ENST00000496570 RNF2Q99496 336 aa12.05□□□□□ -0.48
DNMT3A-215ENST00000496570 RHPN1-AS1Q9BWJ2 59 aa12.05□□□□□ -0.48
DNMT3A-215ENST00000496570 C20orf85Q9H1P6 137 aa12.05□□□□□ -0.48
DNMT3A-215ENST00000496570 PTTG2Q9NZH5 202 aa12.05□□□□□ -0.48
DNMT3A-215ENST00000496570 RPS10-NUDT3A0A1W2PQS6 291 aa12.04□□□□□ -0.48
DNMT3A-215ENST00000496570 RBMY1BA6NDE4 496 aaKnown RBP12.04□□□□□ -0.48
DNMT3A-215ENST00000496570 RBMY1EA6NEQ0 496 aaKnown RBP12.04□□□□□ -0.48
DNMT3A-215ENST00000496570 OR11H12B2RN74 326 aa12.04□□□□□ -0.48
DNMT3A-215ENST00000496570 IFNA10P01566 189 aa12.04□□□□□ -0.48
DNMT3A-215ENST00000496570 TCRBP04435 133 aa12.04□□□□□ -0.48
DNMT3A-215ENST00000496570 RBMY1DP0C7P1 496 aaKnown RBP12.04□□□□□ -0.48
DNMT3A-215ENST00000496570 SLC25A4P12235 298 aa12.04□□□□□ -0.48
DNMT3A-215ENST00000496570 HAGHQ16775 308 aa12.04□□□□□ -0.48
DNMT3A-215ENST00000496570 FAM90A2PQ658T7 463 aa12.04□□□□□ -0.48
DNMT3A-215ENST00000496570 RBPMS2Q6ZRY4 209 aaKnown RBP12.04□□□□□ -0.48
DNMT3A-215ENST00000496570 OR52B4Q8NGK2 314 aa12.04□□□□□ -0.48
DNMT3A-215ENST00000496570 CITED4Q96RK1 184 aa12.04□□□□□ -0.48
DNMT3A-215ENST00000496570 VSIRQ9H7M9 311 aa12.04□□□□□ -0.48
DNMT3A-215ENST00000496570 NBEAL2Q6ZNJ1 2754 aa12.03□□□□□ -0.48
DNMT3A-215ENST00000496570 IGHV3OR16-13A0A075B7E8 117 aa12.03□□□□□ -0.48
DNMT3A-215ENST00000496570 TRAV14DV4A0A0A6YYC5 116 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 281.8 ms