RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 DAZ1Q9NQZ3 744 aaKnown RBP13.19□□□□□ -0.3
RHBDD3-207ENST00000496342 MRPL27Q9P0M9 148 aaKnown RBP13.19□□□□□ -0.3
RHBDD3-207ENST00000496342 IGHV3OR16-13A0A075B7E8 117 aa13.18□□□□□ -0.3
RHBDD3-207ENST00000496342 IGHV3-74A0A0B4J1X5 117 aa13.18□□□□□ -0.3
RHBDD3-207ENST00000496342 NAP1L6A6NFF2 107 aa13.18□□□□□ -0.3
RHBDD3-207ENST00000496342 PLA2G10O15496 165 aa13.18□□□□□ -0.3
RHBDD3-207ENST00000496342 TNFRSF9Q07011 255 aa13.18□□□□□ -0.3
RHBDD3-207ENST00000496342 DEFB125Q8N687 156 aa13.18□□□□□ -0.3
RHBDD3-207ENST00000496342 DUSP18Q8NEJ0 188 aa13.18□□□□□ -0.3
RHBDD3-207ENST00000496342 OR1S1Q8NH92 325 aa13.18□□□□□ -0.3
RHBDD3-207ENST00000496342 TXN2Q99757 166 aa13.18□□□□□ -0.3
RHBDD3-207ENST00000496342 HSPB7Q9UBY9 170 aa13.18□□□□□ -0.3
RHBDD3-207ENST00000496342 U3KQK5 164 aa13.18□□□□□ -0.3
RHBDD3-207ENST00000496342 A6NHS1 94 aa13.17□□□□□ -0.3
RHBDD3-207ENST00000496342 CORTO00230 105 aa13.17□□□□□ -0.3
RHBDD3-207ENST00000496342 TMEM50AO95807 157 aa13.17□□□□□ -0.3
RHBDD3-207ENST00000496342 HOXB5P09067 269 aa13.17□□□□□ -0.3
RHBDD3-207ENST00000496342 ANXA7P20073 488 aaKnown RBP13.17□□□□□ -0.3
RHBDD3-207ENST00000496342 HTR2BP41595 481 aa13.17□□□□□ -0.3
RHBDD3-207ENST00000496342 RELQ04864 619 aaPredicted RBP13.17□□□□□ -0.3
RHBDD3-207ENST00000496342 C2orf83Q53S99 150 aa13.17□□□□□ -0.3
RHBDD3-207ENST00000496342 MARC2Q969Z3 335 aa13.17□□□□□ -0.3
RHBDD3-207ENST00000496342 GAR1Q9NY12 217 aaKnown RBP13.17□□□□□ -0.3
RHBDD3-207ENST00000496342 HUWE1Q7Z6Z7 4374 aaKnown RBP13.16□□□□□ -0.3
RHBDD3-207ENST00000496342 A0A1B0GU03 582 aa13.16□□□□□ -0.3
RHBDD3-207ENST00000496342 NHLRC4P0CG21 123 aaPredicted RBP13.16□□□□□ -0.3
RHBDD3-207ENST00000496342 IAPPP10997 89 aa13.16□□□□□ -0.3
RHBDD3-207ENST00000496342 NPY1RP25929 384 aa13.16□□□□□ -0.3
RHBDD3-207ENST00000496342 NPBWR1P48145 328 aa13.16□□□□□ -0.3
RHBDD3-207ENST00000496342 TOMM20LQ6UXN7 152 aa13.16□□□□□ -0.3
RHBDD3-207ENST00000496342 LRTM2Q8N967 370 aa13.16□□□□□ -0.3
RHBDD3-207ENST00000496342 DTD1Q8TEA8 209 aa13.16□□□□□ -0.3
RHBDD3-207ENST00000496342 ZFAND3Q9H8U3 227 aa13.16□□□□□ -0.3
RHBDD3-207ENST00000496342 IGHV7-4-1A0A0J9YVY3 117 aa13.15□□□□□ -0.3
RHBDD3-207ENST00000496342 DUXBA0A1W2PPF3 345 aa13.15□□□□□ -0.3
RHBDD3-207ENST00000496342 C9orf170A2RU37 121 aa13.15□□□□□ -0.3
RHBDD3-207ENST00000496342 C15orf62A8K5M9 175 aa13.15□□□□□ -0.3
RHBDD3-207ENST00000496342 A8MZ25 164 aa13.15□□□□□ -0.3
RHBDD3-207ENST00000496342 PITX3O75364 302 aa13.15□□□□□ -0.3
RHBDD3-207ENST00000496342 CLN5O75503 358 aa13.15□□□□□ -0.3
RHBDD3-207ENST00000496342 ADAP1O75689 374 aa13.15□□□□□ -0.3
RHBDD3-207ENST00000496342 TIGITQ495A1 244 aa13.15□□□□□ -0.3
RHBDD3-207ENST00000496342 GGNBP1Q5YKI7 109 aa13.15□□□□□ -0.3
RHBDD3-207ENST00000496342 HIPK2Q9H2X6 1198 aa13.15□□□□□ -0.3
RHBDD3-207ENST00000496342 TUBA4BQ9H853 241 aa13.15□□□□□ -0.3
RHBDD3-207ENST00000496342 SRD5A3Q9H8P0 318 aa13.15□□□□□ -0.3
RHBDD3-207ENST00000496342 PUS1Q9Y606 427 aaKnown RBP eCLIP13.15□□□□□ -0.3
RHBDD3-207ENST00000496342 IGHV3-66A0A0C4DH42 116 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 MPTX1A8MV57 137 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 OR11H12B2RN74 326 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 K7EMT4 169 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 LYRM1O43325 122 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 IFNA10P01566 189 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 APOHP02749 345 aaPredicted RBP13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 RND2P52198 227 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 UBE2MP61081 183 aaKnown RBP13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 DHRS2Q13268 280 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 PRSS54Q6PEW0 395 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 ZNF600Q6ZNG1 722 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 RBPMS2Q6ZRY4 209 aaKnown RBP13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 OR52B4Q8NGK2 314 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 OR4X1Q8NH49 305 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 OR10C1Q96KK4 312 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 RCHY1Q96PM5 261 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 RNF2Q99496 336 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 MAGT1Q9H0U3 335 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 RETNQ9HD89 108 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 UBQLN2Q9UHD9 624 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 SMPXQ9UHP9 88 aa13.14□□□□□ -0.31
RHBDD3-207ENST00000496342 TENM3Q9P273 2699 aa13.13□□□□□ -0.31
RHBDD3-207ENST00000496342 IGKV3-7A0A075B6H7 116 aa13.13□□□□□ -0.31
RHBDD3-207ENST00000496342 RBMY1BA6NDE4 496 aaKnown RBP13.13□□□□□ -0.31
RHBDD3-207ENST00000496342 RBMY1EA6NEQ0 496 aaKnown RBP13.13□□□□□ -0.31
RHBDD3-207ENST00000496342 CENPXA8MT69 81 aa13.13□□□□□ -0.31
RHBDD3-207ENST00000496342 CHEK1O14757 476 aa13.13□□□□□ -0.31
RHBDD3-207ENST00000496342 IGKV1-17P01599 117 aa13.13□□□□□ -0.31
RHBDD3-207ENST00000496342 OR4E1P0C645 316 aa13.13□□□□□ -0.31
RHBDD3-207ENST00000496342 RBMY1DP0C7P1 496 aaKnown RBP13.13□□□□□ -0.31
RHBDD3-207ENST00000496342 HAGHQ16775 308 aa13.13□□□□□ -0.31
RHBDD3-207ENST00000496342 TMEM116Q8NCL8 245 aa13.13□□□□□ -0.31
RHBDD3-207ENST00000496342 ST8SIA2Q92186 375 aa13.13□□□□□ -0.31
RHBDD3-207ENST00000496342 C7orf50Q9BRJ6 194 aaKnown RBP13.13□□□□□ -0.31
RHBDD3-207ENST00000496342 RHPN1-AS1Q9BWJ2 59 aa13.13□□□□□ -0.31
RHBDD3-207ENST00000496342 C20orf85Q9H1P6 137 aa13.13□□□□□ -0.31
RHBDD3-207ENST00000496342 RPS10-NUDT3A0A1W2PQS6 291 aa13.12□□□□□ -0.31
RHBDD3-207ENST00000496342 SLC16A13Q7RTY0 426 aa13.12□□□□□ -0.31
RHBDD3-207ENST00000496342 LYG2Q86SG7 212 aa13.12□□□□□ -0.31
RHBDD3-207ENST00000496342 LILRB2Q8N423 598 aa13.12□□□□□ -0.31
RHBDD3-207ENST00000496342 RNASEH2CQ8TDP1 164 aaKnown RBP13.12□□□□□ -0.31
RHBDD3-207ENST00000496342 CITED4Q96RK1 184 aa13.12□□□□□ -0.31
RHBDD3-207ENST00000496342 TM2D3Q9BRN9 247 aa13.12□□□□□ -0.31
RHBDD3-207ENST00000496342 TMED3Q9Y3Q3 217 aa13.12□□□□□ -0.31
RHBDD3-207ENST00000496342 TRAV6A0A075B6T7 132 aa13.11□□□□□ -0.31
RHBDD3-207ENST00000496342 TRAV14DV4A0A0A6YYC5 116 aa13.11□□□□□ -0.31
RHBDD3-207ENST00000496342 TRAV25A0A0B4J276 109 aa13.11□□□□□ -0.31
RHBDD3-207ENST00000496342 IGLC1P0CG04 106 aa13.11□□□□□ -0.31
RHBDD3-207ENST00000496342 TFPI2P48307 235 aa13.11□□□□□ -0.31
RHBDD3-207ENST00000496342 C4orf46Q504U0 113 aa13.11□□□□□ -0.31
RHBDD3-207ENST00000496342 NPIPB3Q92617 1050 aa13.11□□□□□ -0.31
RHBDD3-207ENST00000496342 ACY3Q96HD9 319 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms