RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 TMEM128Q5BJH2 165 aa12.79□□□□□ -0.36
COMMD3-214ENST00000496071 DEFB125Q8N687 156 aa12.79□□□□□ -0.36
COMMD3-214ENST00000496071 OR10C1Q96KK4 312 aa12.79□□□□□ -0.36
COMMD3-214ENST00000496071 SPAG8Q99932 426 aaPredicted RBP12.79□□□□□ -0.36
COMMD3-214ENST00000496071 CEBPZOSA8MTT3 80 aa12.78□□□□□ -0.36
COMMD3-214ENST00000496071 TSPAN4O14817 238 aa12.78□□□□□ -0.36
COMMD3-214ENST00000496071 SCGB2A1O75556 95 aa12.78□□□□□ -0.36
COMMD3-214ENST00000496071 TMEM50AO95807 157 aa12.78□□□□□ -0.36
COMMD3-214ENST00000496071 OPRK1P41145 380 aa12.78□□□□□ -0.36
COMMD3-214ENST00000496071 INPP1P49441 399 aa12.78□□□□□ -0.36
COMMD3-214ENST00000496071 CCR6P51684 374 aa12.78□□□□□ -0.36
COMMD3-214ENST00000496071 NOXA1Q86UR1 476 aa12.78□□□□□ -0.36
COMMD3-214ENST00000496071 GINS3Q9BRX5 216 aa12.78□□□□□ -0.36
COMMD3-214ENST00000496071 SRRQ9GZT4 340 aa12.78□□□□□ -0.36
COMMD3-214ENST00000496071 HIPK2Q9H2X6 1198 aa12.78□□□□□ -0.36
COMMD3-214ENST00000496071 SRD5A3Q9H8P0 318 aa12.78□□□□□ -0.36
COMMD3-214ENST00000496071 SMPXQ9UHP9 88 aa12.78□□□□□ -0.36
COMMD3-214ENST00000496071 IGHV3OR16-8A0A075B7F1 116 aa12.77□□□□□ -0.37
COMMD3-214ENST00000496071 TRAV14DV4A0A0A6YYC5 116 aa12.77□□□□□ -0.37
COMMD3-214ENST00000496071 IGHV7-4-1A0A0J9YVY3 117 aa12.77□□□□□ -0.37
COMMD3-214ENST00000496071 DUXBA0A1W2PPF3 345 aa12.77□□□□□ -0.37
COMMD3-214ENST00000496071 RPS10-NUDT3A0A1W2PQS6 291 aa12.77□□□□□ -0.37
COMMD3-214ENST00000496071 ZNF207O43670 478 aaKnown RBP12.77□□□□□ -0.37
COMMD3-214ENST00000496071 SMCO1Q147U7 214 aa12.77□□□□□ -0.37
COMMD3-214ENST00000496071 C2orf83Q53S99 150 aa12.77□□□□□ -0.37
COMMD3-214ENST00000496071 ZNF600Q6ZNG1 722 aa12.77□□□□□ -0.37
COMMD3-214ENST00000496071 TMED4Q7Z7H5 227 aa12.77□□□□□ -0.37
COMMD3-214ENST00000496071 TMEM116Q8NCL8 245 aa12.77□□□□□ -0.37
COMMD3-214ENST00000496071 ZNF414Q96IQ9 312 aa12.77□□□□□ -0.37
COMMD3-214ENST00000496071 TRAV30A0A087WSZ9 112 aa12.76□□□□□ -0.37
COMMD3-214ENST00000496071 C3orf84H3BNL1 204 aa12.76□□□□□ -0.37
COMMD3-214ENST00000496071 CLN5O75503 358 aa12.76□□□□□ -0.37
COMMD3-214ENST00000496071 BMI1P35226 326 aa12.76□□□□□ -0.37
COMMD3-214ENST00000496071 NMSQ5H8A3 153 aa12.76□□□□□ -0.37
COMMD3-214ENST00000496071 LYZL2Q7Z4W2 148 aa12.76□□□□□ -0.37
COMMD3-214ENST00000496071 SLC24A4Q8NFF2 622 aa12.76□□□□□ -0.37
COMMD3-214ENST00000496071 OR4X1Q8NH49 305 aa12.76□□□□□ -0.37
COMMD3-214ENST00000496071 RNASEH2CQ8TDP1 164 aaKnown RBP12.76□□□□□ -0.37
COMMD3-214ENST00000496071 RHPN1-AS1Q9BWJ2 59 aa12.76□□□□□ -0.37
COMMD3-214ENST00000496071 FNDC4Q9H6D8 234 aaPredicted RBP12.76□□□□□ -0.37
COMMD3-214ENST00000496071 PRR13Q9NZ81 148 aa12.76□□□□□ -0.37
COMMD3-214ENST00000496071 A0A1B0GU03 582 aa12.75□□□□□ -0.37
COMMD3-214ENST00000496071 RBMY1BA6NDE4 496 aaKnown RBP12.75□□□□□ -0.37
COMMD3-214ENST00000496071 RBMY1EA6NEQ0 496 aaKnown RBP12.75□□□□□ -0.37
COMMD3-214ENST00000496071 NAP1L6A6NFF2 107 aa12.75□□□□□ -0.37
COMMD3-214ENST00000496071 OR4C46A6NHA9 309 aa12.75□□□□□ -0.37
COMMD3-214ENST00000496071 CHEK1O14757 476 aa12.75□□□□□ -0.37
COMMD3-214ENST00000496071 CD5P06127 495 aa12.75□□□□□ -0.37
COMMD3-214ENST00000496071 RBMY1DP0C7P1 496 aaKnown RBP12.75□□□□□ -0.37
COMMD3-214ENST00000496071 TNFRSF9Q07011 255 aa12.75□□□□□ -0.37
COMMD3-214ENST00000496071 RBMS2Q15434 407 aaKnown RBP12.75□□□□□ -0.37
COMMD3-214ENST00000496071 TRIQKQ629K1 86 aa12.75□□□□□ -0.37
COMMD3-214ENST00000496071 TOMM20LQ6UXN7 152 aa12.75□□□□□ -0.37
COMMD3-214ENST00000496071 CITED4Q96RK1 184 aa12.75□□□□□ -0.37
COMMD3-214ENST00000496071 WFDC10AQ9H1F0 79 aa12.75□□□□□ -0.37
COMMD3-214ENST00000496071 HSPB7Q9UBY9 170 aa12.75□□□□□ -0.37
COMMD3-214ENST00000496071 SLC25A4P12235 298 aa12.74□□□□□ -0.37
COMMD3-214ENST00000496071 VAMP1P23763 118 aa12.74□□□□□ -0.37
COMMD3-214ENST00000496071 MLANAQ16655 118 aa12.74□□□□□ -0.37
COMMD3-214ENST00000496071 ETFRF1Q6IPR1 90 aa12.74□□□□□ -0.37
COMMD3-214ENST00000496071 CENPSQ8N2Z9 138 aa12.74□□□□□ -0.37
COMMD3-214ENST00000496071 LRTM2Q8N967 370 aa12.74□□□□□ -0.37
COMMD3-214ENST00000496071 PUS1Q9Y606 427 aaKnown RBP eCLIP12.74□□□□□ -0.37
COMMD3-214ENST00000496071 U3KQ87 197 aa12.74□□□□□ -0.37
COMMD3-214ENST00000496071 NXPH3O95157 252 aa12.73□□□□□ -0.37
COMMD3-214ENST00000496071 NPY1RP25929 384 aa12.73□□□□□ -0.37
COMMD3-214ENST00000496071 CMC4P56277 68 aaPredicted RBP12.73□□□□□ -0.37
COMMD3-214ENST00000496071 ATP5IP56385 69 aaPredicted RBP12.73□□□□□ -0.37
COMMD3-214ENST00000496071 BAK1Q16611 211 aa12.73□□□□□ -0.37
COMMD3-214ENST00000496071 OR1S1Q8NH92 325 aa12.73□□□□□ -0.37
COMMD3-214ENST00000496071 MUC7Q8TAX7 377 aa12.73□□□□□ -0.37
COMMD3-214ENST00000496071 RNF2Q99496 336 aa12.73□□□□□ -0.37
COMMD3-214ENST00000496071 FAM110AQ9BQ89 295 aa12.73□□□□□ -0.37
COMMD3-214ENST00000496071 LOC102724200A0A096LPH7 203 aaPredicted RBP12.72□□□□□ -0.37
COMMD3-214ENST00000496071 CENPXA8MT69 81 aa12.72□□□□□ -0.37
COMMD3-214ENST00000496071 SFT2D2O95562 160 aa12.72□□□□□ -0.37
COMMD3-214ENST00000496071 IFNA10P01566 189 aa12.72□□□□□ -0.37
COMMD3-214ENST00000496071 SLC25A6P12236 298 aa12.72□□□□□ -0.37
COMMD3-214ENST00000496071 UBE2MP61081 183 aaKnown RBP12.72□□□□□ -0.37
COMMD3-214ENST00000496071 DTD1Q8TEA8 209 aa12.72□□□□□ -0.37
COMMD3-214ENST00000496071 RBKSQ9H477 322 aa12.72□□□□□ -0.37
COMMD3-214ENST00000496071 TMEM231Q9H6L2 316 aa12.72□□□□□ -0.37
COMMD3-214ENST00000496071 ZFAND3Q9H8U3 227 aa12.72□□□□□ -0.37
COMMD3-214ENST00000496071 MRPL36Q9P0J6 103 aaKnown RBP12.72□□□□□ -0.37
COMMD3-214ENST00000496071 TMED3Q9Y3Q3 217 aa12.72□□□□□ -0.37
COMMD3-214ENST00000496071 TENM3Q9P273 2699 aa12.72□□□□□ -0.37
COMMD3-214ENST00000496071 IGHV3-49A0A0A0MS15 119 aa12.71□□□□□ -0.37
COMMD3-214ENST00000496071 A0A1W2PS18 150 aa12.71□□□□□ -0.37
COMMD3-214ENST00000496071 NPPCP23582 126 aa12.71□□□□□ -0.37
COMMD3-214ENST00000496071 PAFAH1B2P68402 229 aa12.71□□□□□ -0.37
COMMD3-214ENST00000496071 PPP1R1AQ13522 171 aa12.71□□□□□ -0.37
COMMD3-214ENST00000496071 PRSS54Q6PEW0 395 aa12.71□□□□□ -0.37
COMMD3-214ENST00000496071 OR1S2Q8NGQ3 325 aa12.71□□□□□ -0.37
COMMD3-214ENST00000496071 C7orf50Q9BRJ6 194 aaKnown RBP12.71□□□□□ -0.37
COMMD3-214ENST00000496071 GGTLC1Q9BX51 225 aa12.71□□□□□ -0.37
COMMD3-214ENST00000496071 VSIRQ9H7M9 311 aa12.71□□□□□ -0.37
COMMD3-214ENST00000496071 STAB2Q8WWQ8 2551 aa12.71□□□□□ -0.38
COMMD3-214ENST00000496071 FAM90A26D6RGX4 464 aa12.7□□□□□ -0.38
COMMD3-214ENST00000496071 PITX3O75364 302 aa12.7□□□□□ -0.38
COMMD3-214ENST00000496071 NDUFB6O95139 128 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms