RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 CCDC71LQ8N9Z2 235 aa7.12□□□□□ -1.27
MSH5-218ENST00000494646 ZNF114Q8NC26 417 aa7.12□□□□□ -1.27
MSH5-218ENST00000494646 DUSP18Q8NEJ0 188 aa7.12□□□□□ -1.27
MSH5-218ENST00000494646 RNASE11Q8TAA1 199 aaKnown RBP7.12□□□□□ -1.27
MSH5-218ENST00000494646 IL17DQ8TAD2 202 aa7.12□□□□□ -1.27
MSH5-218ENST00000494646 C15orf40Q8WUR7 153 aa7.12□□□□□ -1.27
MSH5-218ENST00000494646 RRNAD1Q96FB5 475 aaKnown RBP7.12□□□□□ -1.27
MSH5-218ENST00000494646 DIRAS2Q96HU8 199 aa7.12□□□□□ -1.27
MSH5-218ENST00000494646 RTBDNQ9BSG5 229 aaPredicted RBP7.12□□□□□ -1.27
MSH5-218ENST00000494646 PDCD10Q9BUL8 212 aa7.12□□□□□ -1.27
MSH5-218ENST00000494646 OR4C46A6NHA9 309 aa7.11□□□□□ -1.27
MSH5-218ENST00000494646 DISC1C4P0D8 188 aa7.11□□□□□ -1.27
MSH5-218ENST00000494646 SPRY2O43597 315 aa7.11□□□□□ -1.27
MSH5-218ENST00000494646 ATG12O94817 140 aa7.11□□□□□ -1.27
MSH5-218ENST00000494646 OR5AC1P0C628 307 aa7.11□□□□□ -1.27
MSH5-218ENST00000494646 TBPP20226 339 aa7.11□□□□□ -1.27
MSH5-218ENST00000494646 UCP1P25874 307 aa7.11□□□□□ -1.27
MSH5-218ENST00000494646 NPBWR1P48145 328 aa7.11□□□□□ -1.27
MSH5-218ENST00000494646 HOXA1P49639 335 aaPredicted RBP7.11□□□□□ -1.27
MSH5-218ENST00000494646 SUB1P53999 127 aaKnown RBP eCLIP7.11□□□□□ -1.27
MSH5-218ENST00000494646 DEFB135Q30KP9 77 aa7.11□□□□□ -1.27
MSH5-218ENST00000494646 SELENOHQ8IZQ5 122 aaKnown RBP7.11□□□□□ -1.27
MSH5-218ENST00000494646 ENY2Q9NPA8 101 aa7.11□□□□□ -1.27
MSH5-218ENST00000494646 MRPL36Q9P0J6 103 aaKnown RBP7.11□□□□□ -1.27
MSH5-218ENST00000494646 C14orf166Q9Y224 244 aaKnown RBP7.11□□□□□ -1.27
MSH5-218ENST00000494646 A0A0J9YWU9 116 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 DFFBO76075 338 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 CDS2O95674 445 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 HNRNPCP07910 306 aaKnown RBP eCLIP7.1□□□□□ -1.27
MSH5-218ENST00000494646 RNASE2P10153 161 aaKnown RBP7.1□□□□□ -1.27
MSH5-218ENST00000494646 APOC4P55056 127 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 RPL11P62913 178 aaKnown RBP7.1□□□□□ -1.27
MSH5-218ENST00000494646 EWSR1Q01844 656 aaKnown RBP eCLIP7.1□□□□□ -1.27
MSH5-218ENST00000494646 PMS2P11Q13670 270 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 MEF2DQ14814 521 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 FAM90A2PQ658T7 463 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 TCF24Q7RTU0 167 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 STPG3Q8N7X2 389 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 OR4C16Q8NGL9 310 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 LHFPL5Q8TAF8 219 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 DYNC2LI1Q8TCX1 351 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 GLYATL2Q8WU03 294 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 ST8SIA2Q92186 375 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 GPR146Q96CH1 333 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 GALNT14Q96FL9 552 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 OR10C1Q96KK4 312 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 C6orf62Q9GZU0 229 aaPredicted RBP7.1□□□□□ -1.27
MSH5-218ENST00000494646 NAA60Q9H7X0 242 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 PRR13Q9NZ81 148 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 GPR132Q9UNW8 380 aa7.1□□□□□ -1.27
MSH5-218ENST00000494646 PUS1Q9Y606 427 aaKnown RBP eCLIP7.1□□□□□ -1.27
MSH5-218ENST00000494646 A0A1B0GU03 582 aa7.09□□□□□ -1.27
MSH5-218ENST00000494646 NXPH3O95157 252 aa7.09□□□□□ -1.27
MSH5-218ENST00000494646 AKAIN1P0CW23 69 aa7.09□□□□□ -1.27
MSH5-218ENST00000494646 OPRK1P41145 380 aa7.09□□□□□ -1.27
MSH5-218ENST00000494646 PAFAH1B2P68402 229 aa7.09□□□□□ -1.27
MSH5-218ENST00000494646 MRPS10P82664 201 aaKnown RBP7.09□□□□□ -1.27
MSH5-218ENST00000494646 SSBP1Q04837 148 aaKnown RBP7.09□□□□□ -1.27
MSH5-218ENST00000494646 TMEM268Q5VZI3 342 aa7.09□□□□□ -1.27
MSH5-218ENST00000494646 ZNF600Q6ZNG1 722 aa7.09□□□□□ -1.27
MSH5-218ENST00000494646 OR51S1Q8NGJ8 323 aa7.09□□□□□ -1.27
MSH5-218ENST00000494646 TMEM230Q96A57 120 aa7.09□□□□□ -1.27
MSH5-218ENST00000494646 GINS3Q9BRX5 216 aa7.09□□□□□ -1.27
MSH5-218ENST00000494646 TMEM222Q9H0R3 208 aa7.09□□□□□ -1.27
MSH5-218ENST00000494646 FNDC4Q9H6D8 234 aaPredicted RBP7.09□□□□□ -1.27
MSH5-218ENST00000494646 HEYLQ9NQ87 328 aaPredicted RBP7.09□□□□□ -1.27
MSH5-218ENST00000494646 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.09□□□□□ -1.27
MSH5-218ENST00000494646 FRAS1Q86XX4 4008 aa7.09□□□□□ -1.27
MSH5-218ENST00000494646 FABP12A6NFH5 140 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 CRYM-AS1A6NIL9 109 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 INS-IGF2F8WCM5 200 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 DNASE2O00115 360 aaPredicted RBP7.08□□□□□ -1.28
MSH5-218ENST00000494646 UBE2CO00762 179 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 CTDSPLO15194 276 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 CLN5O75503 358 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 BMI1P35226 326 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 TMBIM6P55061 237 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 SPCS3P61009 180 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 PRR20EP86478 221 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 PRR20CP86479 221 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 PRR20DP86480 221 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 PRR20BP86481 221 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 PRR20AP86496 221 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 DHODHQ02127 395 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 TIGITQ495A1 244 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 LEMD1Q68G75 181 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 PVRIGQ6DKI7 326 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 Q6ZWC4 215 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 LYG2Q86SG7 212 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 RAB2BQ8WUD1 216 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 SMIM4Q8WVI0 70 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 RNF183Q96D59 192 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 MS4A6AQ9H2W1 248 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 MAP6D1Q9H9H5 199 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 CACNG5Q9UF02 275 aa7.08□□□□□ -1.28
MSH5-218ENST00000494646 DNAH2Q9P225 4427 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 DNAH6Q9C0G6 4158 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 KIR2DL5BA0A0G2JN68 375 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 KIR2DL5BA0A0G2JPC4 375 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 ANKRD20A5PA0PJZ0 165 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms