RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 HCP5Q6MZN7 132 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 FAM71F2Q6NXP2 309 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 C8orf31Q8N9H6 132 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 PRO1933Q9H354 126 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 IL36BQ9NZH7 164 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 GGTLC3B5MD39 225 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 RNF224P0DH78 156 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 PNKDQ8N490 385 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 MRPL36Q9P0J6 103 aaKnown RBP9.03□□□□□ -0.96
CHMP3-209ENST00000494623 RALYQ9UKM9 306 aaKnown RBP9.03□□□□□ -0.96
CHMP3-209ENST00000494623 PLXNB1O43157 2135 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 A0A1B0GUS0 222 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 A0A1W2PPI3 338 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 COX7A2P2O60397 106 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 CNTFRP26992 372 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 GRNP28799 593 aaKnown RBP9.03□□□□□ -0.96
CHMP3-209ENST00000494623 JOSD1Q15040 202 aaPredicted RBP9.03□□□□□ -0.96
CHMP3-209ENST00000494623 OR5AU1Q8NGC0 362 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 RNASEH2CQ8TDP1 164 aaKnown RBP9.03□□□□□ -0.96
CHMP3-209ENST00000494623 SLC25A2Q9BXI2 301 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 A0A087X0M5 115 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 A0A1B0GX30 115 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 INS-IGF2F8WCM5 200 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 GZMBP10144 247 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 CBLN1P23435 193 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 ADMP35318 185 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 UBE2L3P68036 154 aaKnown RBP9.03□□□□□ -0.96
CHMP3-209ENST00000494623 FAM167A-AS1Q96KT0 104 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 RNASE7Q9H1E1 156 aaKnown RBP9.03□□□□□ -0.96
CHMP3-209ENST00000494623 CHODLQ9H9P2 273 aa9.03□□□□□ -0.96
CHMP3-209ENST00000494623 PSMB11A5LHX3 300 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 ZNF705GA8MUZ8 300 aaPredicted RBP9.02□□□□□ -0.97
CHMP3-209ENST00000494623 SPINK4O60575 86 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 FRMD6-AS1P0C7T7 363 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 PYYP10082 97 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 LGALS7P47929 136 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 ZNF137PP52743 207 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 TNXAQ16473 311 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 MRGPRG-AS1Q2M3A8 158 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 C10orf113Q5VZT2 155 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 PATE2Q6UY27 113 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 C19orf35Q6ZS72 473 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 TMEM256Q8N2U0 113 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 MUC15Q8N387 334 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 TMEM18Q96B42 140 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 MISP3Q96FF7 219 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 INSIG2Q9Y5U4 225 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 LY96Q9Y6Y9 160 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 ARL2-SNX15V9GYD0 113 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 NAV3Q8IVL0 2385 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 PTPRQQ9UMZ3 2332 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 IGHV3-21A0A0B4J1V1 117 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 IGHV2-26A0A0B4J1V2 119 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 TCRBV4S1A1TA0A5B7 111 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 MGST1P10620 155 aaKnown RBP9.02□□□□□ -0.97
CHMP3-209ENST00000494623 COX7A1P24310 79 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 PRRX1P54821 245 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 FXYD3Q14802 87 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 TIGITQ495A1 244 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 RUSC1-AS1Q66K80 236 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 LHFPL4Q7Z7J7 247 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 MRPL41Q8IXM3 137 aaKnown RBP9.02□□□□□ -0.97
CHMP3-209ENST00000494623 MMD2Q8IY49 270 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 MRPL32Q9BYC8 188 aaKnown RBP9.02□□□□□ -0.97
CHMP3-209ENST00000494623 ZNF355PQ9NSJ1 428 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 PPP1R14DQ9NXH3 145 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 RELNP78509 3460 aa9.02□□□□□ -0.97
CHMP3-209ENST00000494623 IGKV1D-37A0A075B6S9 117 aa9.01□□□□□ -0.97
CHMP3-209ENST00000494623 A0A1W2PRE2 83 aa9.01□□□□□ -0.97
CHMP3-209ENST00000494623 GRIFINA4D1Z8 144 aa9.01□□□□□ -0.97
CHMP3-209ENST00000494623 IER3P46695 156 aa9.01□□□□□ -0.97
CHMP3-209ENST00000494623 CASP6P55212 293 aa9.01□□□□□ -0.97
CHMP3-209ENST00000494623 YPEL3P61236 119 aaPredicted RBP9.01□□□□□ -0.97
CHMP3-209ENST00000494623 RPEL1Q2QD12 228 aa9.01□□□□□ -0.97
CHMP3-209ENST00000494623 OR8I2Q8N0Y5 310 aa9.01□□□□□ -0.97
CHMP3-209ENST00000494623 OR1L6Q8NGR2 347 aa9.01□□□□□ -0.97
CHMP3-209ENST00000494623 LINC00479Q96M42 142 aa9.01□□□□□ -0.97
CHMP3-209ENST00000494623 V9GYV3 84 aa9.01□□□□□ -0.97
CHMP3-209ENST00000494623 MALRD1Q5VYJ5 2156 aa9.01□□□□□ -0.97
CHMP3-209ENST00000494623 NUPR1O60356 82 aa9.01□□□□□ -0.97
CHMP3-209ENST00000494623 ORM2P19652 201 aa9.01□□□□□ -0.97
CHMP3-209ENST00000494623 LGALS4P56470 323 aa9.01□□□□□ -0.97
CHMP3-209ENST00000494623 NHLRC2Q8NBF2 726 aa9.01□□□□□ -0.97
CHMP3-209ENST00000494623 RNF2Q99496 336 aa9.01□□□□□ -0.97
CHMP3-209ENST00000494623 PAXXQ9BUH6 204 aa9.01□□□□□ -0.97
CHMP3-209ENST00000494623 TPRP12270 2363 aaKnown RBP9□□□□□ -0.97
CHMP3-209ENST00000494623 MOSP00540 346 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 PCP4P48539 62 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 DEFA6Q01524 100 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 DNLZQ5SXM8 178 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 ASPHD1Q5U4P2 390 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 GBGT1Q8N5D6 347 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 OR1L4Q8NGR5 311 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 OR5R1Q8NH85 324 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 MRPL18Q9H0U6 180 aaKnown RBP9□□□□□ -0.97
CHMP3-209ENST00000494623 SERTAD4Q9NUC0 356 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 SPTA1P02549 2419 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 PPIAL4CA0A0B4J2A2 164 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 IGLC7A0M8Q6 106 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 CCL21O00585 134 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms