RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 HPGDSO60760 199 aa9.19□□□□□ -0.94
SKA1-205ENST00000494518 TMEM50AO95807 157 aa9.19□□□□□ -0.94
SKA1-205ENST00000494518 IFNA17P01571 189 aa9.19□□□□□ -0.94
SKA1-205ENST00000494518 GIG44P09565 113 aaPredicted RBP9.19□□□□□ -0.94
SKA1-205ENST00000494518 ZNF688P0C7X2 276 aa9.19□□□□□ -0.94
SKA1-205ENST00000494518 RBMY1A1P0DJD3 496 aaKnown RBP9.19□□□□□ -0.94
SKA1-205ENST00000494518 RBMY1CP0DJD4 496 aa9.19□□□□□ -0.94
SKA1-205ENST00000494518 C4BPBP20851 252 aa9.19□□□□□ -0.94
SKA1-205ENST00000494518 RCVRNP35243 200 aa9.19□□□□□ -0.94
SKA1-205ENST00000494518 ETV6P41212 452 aa9.19□□□□□ -0.94
SKA1-205ENST00000494518 HOXA1P49639 335 aaPredicted RBP9.19□□□□□ -0.94
SKA1-205ENST00000494518 RBMY1FQ15415 496 aaKnown RBP9.19□□□□□ -0.94
SKA1-205ENST00000494518 MLANAQ16655 118 aa9.19□□□□□ -0.94
SKA1-205ENST00000494518 TP53RKQ96S44 253 aa9.19□□□□□ -0.94
SKA1-205ENST00000494518 FAM212BQ9NTI7 297 aaPredicted RBP9.19□□□□□ -0.94
SKA1-205ENST00000494518 CLEC5AQ9NY25 188 aa9.19□□□□□ -0.94
SKA1-205ENST00000494518 APLNQ9ULZ1 77 aa9.19□□□□□ -0.94
SKA1-205ENST00000494518 RYR1P21817 5038 aa9.18□□□□□ -0.94
SKA1-205ENST00000494518 SMIM31A0A1B0GVY4 71 aa9.18□□□□□ -0.94
SKA1-205ENST00000494518 A6NJY4 79 aa9.18□□□□□ -0.94
SKA1-205ENST00000494518 RNASE2P10153 161 aaKnown RBP9.18□□□□□ -0.94
SKA1-205ENST00000494518 ELK1P19419 428 aa9.18□□□□□ -0.94
SKA1-205ENST00000494518 HLA-DMBP28068 263 aa9.18□□□□□ -0.94
SKA1-205ENST00000494518 OPRK1P41145 380 aa9.18□□□□□ -0.94
SKA1-205ENST00000494518 P2RY1P47900 373 aa9.18□□□□□ -0.94
SKA1-205ENST00000494518 UCP3P55916 312 aa9.18□□□□□ -0.94
SKA1-205ENST00000494518 PIGPP57054 158 aa9.18□□□□□ -0.94
SKA1-205ENST00000494518 NCS1P62166 190 aa9.18□□□□□ -0.94
SKA1-205ENST00000494518 SP6Q3SY56 376 aa9.18□□□□□ -0.94
SKA1-205ENST00000494518 TIGITQ495A1 244 aa9.18□□□□□ -0.94
SKA1-205ENST00000494518 FNDC4Q9H6D8 234 aaPredicted RBP9.18□□□□□ -0.94
SKA1-205ENST00000494518 TMEM231Q9H6L2 316 aa9.18□□□□□ -0.94
SKA1-205ENST00000494518 SCPEP1Q9HB40 452 aa9.18□□□□□ -0.94
SKA1-205ENST00000494518 DYNC1H1Q14204 4646 aaKnown RBP9.18□□□□□ -0.94
SKA1-205ENST00000494518 A0A0G2JRQ6 117 aa9.17□□□□□ -0.94
SKA1-205ENST00000494518 K7EQG2 157 aa9.17□□□□□ -0.94
SKA1-205ENST00000494518 APOA1P02647 267 aa9.17□□□□□ -0.94
SKA1-205ENST00000494518 CD5P06127 495 aa9.17□□□□□ -0.94
SKA1-205ENST00000494518 P0C879 139 aa9.17□□□□□ -0.94
SKA1-205ENST00000494518 NPPCP23582 126 aa9.17□□□□□ -0.94
SKA1-205ENST00000494518 VBP1P61758 197 aa9.17□□□□□ -0.94
SKA1-205ENST00000494518 TRIM16LQ309B1 348 aa9.17□□□□□ -0.94
SKA1-205ENST00000494518 ACTL10Q5JWF8 245 aa9.17□□□□□ -0.94
SKA1-205ENST00000494518 Q6ZTC4 211 aa9.17□□□□□ -0.94
SKA1-205ENST00000494518 ZNF767PQ75MW2 155 aa9.17□□□□□ -0.94
SKA1-205ENST00000494518 TRPT1Q86TN4 253 aaKnown RBP9.17□□□□□ -0.94
SKA1-205ENST00000494518 RNASE11Q8TAA1 199 aaKnown RBP9.17□□□□□ -0.94
SKA1-205ENST00000494518 TMEM230Q96A57 120 aa9.17□□□□□ -0.94
SKA1-205ENST00000494518 METTL26Q96S19 204 aa9.17□□□□□ -0.94
SKA1-205ENST00000494518 PDCD10Q9BUL8 212 aa9.17□□□□□ -0.94
SKA1-205ENST00000494518 DNAH11Q96DT5 4516 aa9.16□□□□□ -0.94
SKA1-205ENST00000494518 ELOA3CA0A087WX78 387 aaPredicted RBP9.16□□□□□ -0.94
SKA1-205ENST00000494518 TRAV2A0A0B4J234 112 aa9.16□□□□□ -0.94
SKA1-205ENST00000494518 CLN5O75503 358 aa9.16□□□□□ -0.94
SKA1-205ENST00000494518 RND3P61587 244 aa9.16□□□□□ -0.94
SKA1-205ENST00000494518 ENY2Q9NPA8 101 aa9.16□□□□□ -0.94
SKA1-205ENST00000494518 X6R8D5 127 aa9.16□□□□□ -0.94
SKA1-205ENST00000494518 IGHV4-4A0A075B6R2 117 aa9.15□□□□□ -0.94
SKA1-205ENST00000494518 C3orf85A0A1B0GTC6 90 aa9.15□□□□□ -0.94
SKA1-205ENST00000494518 A0A1W2PS18 150 aa9.15□□□□□ -0.94
SKA1-205ENST00000494518 FAM25AB3EWG3 89 aa9.15□□□□□ -0.94
SKA1-205ENST00000494518 FAM25CB3EWG5 89 aa9.15□□□□□ -0.94
SKA1-205ENST00000494518 FAM25GB3EWG6 89 aa9.15□□□□□ -0.94
SKA1-205ENST00000494518 CD3DP04234 171 aa9.15□□□□□ -0.94
SKA1-205ENST00000494518 SUB1P53999 127 aaKnown RBP eCLIP9.15□□□□□ -0.94
SKA1-205ENST00000494518 RNASE10Q5GAN6 216 aaKnown RBP9.15□□□□□ -0.94
SKA1-205ENST00000494518 LHFPL1Q86WI0 220 aa9.15□□□□□ -0.94
SKA1-205ENST00000494518 OR4D10Q8NGI6 311 aa9.15□□□□□ -0.94
SKA1-205ENST00000494518 OR52I2Q8NH67 350 aa9.15□□□□□ -0.94
SKA1-205ENST00000494518 VCX3AQ9NNX9 186 aa9.15□□□□□ -0.94
SKA1-205ENST00000494518 KLK11Q9UBX7 282 aa9.15□□□□□ -0.94
SKA1-205ENST00000494518 CELA1Q9UNI1 258 aa9.15□□□□□ -0.94
SKA1-205ENST00000494518 MUC4Q99102 2169 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 TRAV10A0A0B4J240 114 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 C11orf94C9JXX5 98 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 CORTO00230 105 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 IGKV1-17P01599 117 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 SPP1P10451 314 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 MIFP14174 115 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 CRYBB3P26998 211 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 TCTAP57738 103 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 DHRS2Q13268 280 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 PSMG4Q5JS54 123 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 PVRIGQ6DKI7 326 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 MORN3Q6PF18 240 aaPredicted RBP9.14□□□□□ -0.95
SKA1-205ENST00000494518 Q6ZRM9 215 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 OR13C8Q8NGS7 320 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 OR4X1Q8NH49 305 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 DCANP1Q8TF63 244 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 RRNAD1Q96FB5 475 aaKnown RBP9.14□□□□□ -0.95
SKA1-205ENST00000494518 GRAMD2BQ96HH9 432 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 NARS2Q96I59 477 aaKnown RBP9.14□□□□□ -0.95
SKA1-205ENST00000494518 FUNDC2Q9BWH2 189 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 SCRT1Q9BWW7 348 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 COPZ2Q9P299 210 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 TBC1D24Q9ULP9 559 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 PKD1P98161 4303 aa9.14□□□□□ -0.95
SKA1-205ENST00000494518 A0A087WXM4 84 aa9.13□□□□□ -0.95
SKA1-205ENST00000494518 ZNF705EA8MWA4 302 aaPredicted RBP9.13□□□□□ -0.95
SKA1-205ENST00000494518 INS-IGF2F8WCM5 200 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms