RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 COX6B1P14854 86 aa13.13□□□□□ -0.31
ATG4B-225ENST00000494465 RHEBQ15382 184 aa13.13□□□□□ -0.31
ATG4B-225ENST00000494465 CYP2G1PQ6ZSU1 146 aa13.13□□□□□ -0.31
ATG4B-225ENST00000494465 CENPVL3A0A0U1RRI6 287 aa13.13□□□□□ -0.31
ATG4B-225ENST00000494465 PSMB11A5LHX3 300 aa13.13□□□□□ -0.31
ATG4B-225ENST00000494465 NDUFS6O75380 124 aaKnown RBP13.13□□□□□ -0.31
ATG4B-225ENST00000494465 CNIH1O95406 144 aa13.13□□□□□ -0.31
ATG4B-225ENST00000494465 CXorf1O96002 111 aa13.13□□□□□ -0.31
ATG4B-225ENST00000494465 SLC25A33Q9BSK2 321 aa13.13□□□□□ -0.31
ATG4B-225ENST00000494465 RND2P52198 227 aa13.12□□□□□ -0.31
ATG4B-225ENST00000494465 MIR17HGQ75NE6 70 aa13.12□□□□□ -0.31
ATG4B-225ENST00000494465 ZFHX3Q15911 3703 aa13.12□□□□□ -0.31
ATG4B-225ENST00000494465 TCRBV4S1A1TA0A5B7 111 aa13.12□□□□□ -0.31
ATG4B-225ENST00000494465 NPFFO15130 113 aa13.12□□□□□ -0.31
ATG4B-225ENST00000494465 CTRB1P17538 263 aa13.12□□□□□ -0.31
ATG4B-225ENST00000494465 ZNF90Q03938 601 aa13.12□□□□□ -0.31
ATG4B-225ENST00000494465 FXYD3Q14802 87 aa13.12□□□□□ -0.31
ATG4B-225ENST00000494465 FAM120AOSQ5T036 256 aa13.12□□□□□ -0.31
ATG4B-225ENST00000494465 FAM78BQ5VT40 261 aa13.12□□□□□ -0.31
ATG4B-225ENST00000494465 CTRB2Q6GPI1 263 aa13.12□□□□□ -0.31
ATG4B-225ENST00000494465 TMEM37Q8WXS4 190 aa13.12□□□□□ -0.31
ATG4B-225ENST00000494465 NIPSNAP3BQ9BS92 247 aa13.12□□□□□ -0.31
ATG4B-225ENST00000494465 FUT9Q9Y231 359 aa13.12□□□□□ -0.31
ATG4B-225ENST00000494465 CELSR1Q9NYQ6 3014 aa13.11□□□□□ -0.31
ATG4B-225ENST00000494465 ABCA1O95477 2261 aa13.11□□□□□ -0.31
ATG4B-225ENST00000494465 TMEM250H0YL14 139 aa13.11□□□□□ -0.31
ATG4B-225ENST00000494465 CORTO00230 105 aa13.11□□□□□ -0.31
ATG4B-225ENST00000494465 OR5G3P0C626 314 aa13.11□□□□□ -0.31
ATG4B-225ENST00000494465 ETFRF1Q6IPR1 90 aa13.11□□□□□ -0.31
ATG4B-225ENST00000494465 TMEM116Q8NCL8 245 aa13.11□□□□□ -0.31
ATG4B-225ENST00000494465 FAM103A1Q9BTL3 118 aaKnown RBP13.11□□□□□ -0.31
ATG4B-225ENST00000494465 SMCO4Q9NRQ5 59 aa13.11□□□□□ -0.31
ATG4B-225ENST00000494465 TMEM11P17152 192 aa13.1□□□□□ -0.31
ATG4B-225ENST00000494465 GCHFRP30047 84 aa13.1□□□□□ -0.31
ATG4B-225ENST00000494465 OR4F5Q8NH21 305 aa13.1□□□□□ -0.31
ATG4B-225ENST00000494465 TVP23CQ96ET8 276 aa13.1□□□□□ -0.31
ATG4B-225ENST00000494465 OR4F4Q96R69 305 aa13.1□□□□□ -0.31
ATG4B-225ENST00000494465 WNT10AQ9GZT5 417 aa13.1□□□□□ -0.31
ATG4B-225ENST00000494465 MT-CO2P00403 227 aa13.1□□□□□ -0.31
ATG4B-225ENST00000494465 UBE2G2P60604 165 aa13.1□□□□□ -0.31
ATG4B-225ENST00000494465 NDPQ00604 133 aa13.1□□□□□ -0.31
ATG4B-225ENST00000494465 ZNF562Q6V9R5 426 aa13.1□□□□□ -0.31
ATG4B-225ENST00000494465 IGHV3-21A0A0B4J1V1 117 aa13.09□□□□□ -0.31
ATG4B-225ENST00000494465 NCBP2LA6PVI3 153 aaKnown RBP13.09□□□□□ -0.31
ATG4B-225ENST00000494465 C11orf94C9JXX5 98 aa13.09□□□□□ -0.31
ATG4B-225ENST00000494465 I3L2K1 104 aa13.09□□□□□ -0.31
ATG4B-225ENST00000494465 NPPCP23582 126 aa13.09□□□□□ -0.31
ATG4B-225ENST00000494465 ATP5G3P48201 142 aa13.09□□□□□ -0.31
ATG4B-225ENST00000494465 CX3CL1P78423 397 aa13.09□□□□□ -0.31
ATG4B-225ENST00000494465 ASPHD1Q5U4P2 390 aa13.09□□□□□ -0.31
ATG4B-225ENST00000494465 ZNF503Q96F45 646 aa13.09□□□□□ -0.31
ATG4B-225ENST00000494465 C19orf24Q9BVV8 132 aa13.09□□□□□ -0.31
ATG4B-225ENST00000494465 MAP1AP78559 2803 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-225ENST00000494465 Q8N9W7 124 aa13.09□□□□□ -0.31
ATG4B-225ENST00000494465 COLCA2A8K830 154 aa13.08□□□□□ -0.32
ATG4B-225ENST00000494465 FAM106CPP0CH98 169 aa13.08□□□□□ -0.32
ATG4B-225ENST00000494465 TUBA4BQ9H853 241 aa13.08□□□□□ -0.32
ATG4B-225ENST00000494465 ZNF727A8MUV8 499 aa13.08□□□□□ -0.32
ATG4B-225ENST00000494465 SELENOTP62341 195 aa13.08□□□□□ -0.32
ATG4B-225ENST00000494465 MORN5Q5VZ52 161 aa13.08□□□□□ -0.32
ATG4B-225ENST00000494465 PATE2Q6UY27 113 aa13.08□□□□□ -0.32
ATG4B-225ENST00000494465 NANPQ8TBE9 248 aa13.08□□□□□ -0.32
ATG4B-225ENST00000494465 TRGV9Q99603 122 aa13.08□□□□□ -0.32
ATG4B-225ENST00000494465 PARLQ9H300 379 aa13.08□□□□□ -0.32
ATG4B-225ENST00000494465 SDF2L1Q9HCN8 221 aa13.08□□□□□ -0.32
ATG4B-225ENST00000494465 TNFRSF19Q9NS68 423 aa13.08□□□□□ -0.32
ATG4B-225ENST00000494465 YTHDF2Q9Y5A9 579 aaKnown RBP13.08□□□□□ -0.32
ATG4B-225ENST00000494465 ANKRD17O75179 2603 aaKnown RBP13.07□□□□□ -0.32
ATG4B-225ENST00000494465 DSCR9P59020 149 aa13.07□□□□□ -0.32
ATG4B-225ENST00000494465 CST9LP1Q5W188 147 aa13.07□□□□□ -0.32
ATG4B-225ENST00000494465 ARPC1AQ92747 370 aa13.07□□□□□ -0.32
ATG4B-225ENST00000494465 RPUSD4Q96CM3 377 aaKnown RBP13.07□□□□□ -0.32
ATG4B-225ENST00000494465 DNAJC4Q9NNZ3 241 aa13.07□□□□□ -0.32
ATG4B-225ENST00000494465 IGHV1-69DA0A0B4J2H0 117 aa13.07□□□□□ -0.32
ATG4B-225ENST00000494465 IGHV1-69P01742 117 aa13.07□□□□□ -0.32
ATG4B-225ENST00000494465 BRS3P32247 399 aa13.07□□□□□ -0.32
ATG4B-225ENST00000494465 KIAA0141Q14154 515 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-225ENST00000494465 OR51G1Q8NGK1 321 aa13.07□□□□□ -0.32
ATG4B-225ENST00000494465 ISOC2Q96AB3 205 aa13.07□□□□□ -0.32
ATG4B-225ENST00000494465 FAM167A-AS1Q96KT0 104 aa13.07□□□□□ -0.32
ATG4B-225ENST00000494465 SMIM7Q9BQ49 75 aa13.07□□□□□ -0.32
ATG4B-225ENST00000494465 TECRQ9NZ01 308 aaKnown RBP13.07□□□□□ -0.32
ATG4B-225ENST00000494465 KMT2BQ9UMN6 2715 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-225ENST00000494465 CENPEQ02224 2701 aa13.06□□□□□ -0.32
ATG4B-225ENST00000494465 IGHV3OR16-10A0A075B7F0 116 aa13.06□□□□□ -0.32
ATG4B-225ENST00000494465 K7EIM0 57 aa13.06□□□□□ -0.32
ATG4B-225ENST00000494465 EGR2P11161 476 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-225ENST00000494465 COL8A1P27658 744 aa13.06□□□□□ -0.32
ATG4B-225ENST00000494465 PNRC1Q12796 327 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-225ENST00000494465 GSX1Q9H4S2 264 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-225ENST00000494465 USP9YO00507 2555 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-225ENST00000494465 A0A087WWC5 75 aa13.06□□□□□ -0.32
ATG4B-225ENST00000494465 IGHV7-81A0A0B4J1V7 117 aa13.06□□□□□ -0.32
ATG4B-225ENST00000494465 PDE6DO43924 150 aa13.06□□□□□ -0.32
ATG4B-225ENST00000494465 MSMBP08118 114 aa13.06□□□□□ -0.32
ATG4B-225ENST00000494465 ATF4P18848 351 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-225ENST00000494465 C22orf15Q8WYQ4 148 aa13.06□□□□□ -0.32
ATG4B-225ENST00000494465 MRPL32Q9BYC8 188 aaKnown RBP13.06□□□□□ -0.32
ATG4B-225ENST00000494465 DOK5Q9P104 306 aa13.06□□□□□ -0.32
ATG4B-225ENST00000494465 NPIPB5A8MRT5 1133 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms