RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SLURP1P55000 103 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 TNFRSF9Q07011 255 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 ZNF266Q14584 549 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 TNXAQ16473 311 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 IZUMO4Q1ZYL8 232 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 FAM74A1Q5RGS3 127 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 H2BFWTQ7Z2G1 175 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 MMD2Q8IY49 270 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 VSTM2AQ8TAG5 236 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 RNF141Q8WVD5 230 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 PCNPQ8WW12 178 aaKnown RBP10.16□□□□□ -0.78
ERCC3-209ENST00000494464 DLX4Q92988 240 aaPredicted RBP10.16□□□□□ -0.78
ERCC3-209ENST00000494464 CXorf58Q96LI9 332 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 GINS3Q9BRX5 216 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 ZNF430Q9H8G1 570 aaPredicted RBP10.16□□□□□ -0.78
ERCC3-209ENST00000494464 PFDN2Q9UHV9 154 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 SULT1A1P50225 295 aa10.15□□□□□ -0.78
ERCC3-209ENST00000494464 ERVK-16P61578 105 aa10.15□□□□□ -0.78
ERCC3-209ENST00000494464 POU2AF1Q16633 256 aa10.15□□□□□ -0.78
ERCC3-209ENST00000494464 ZNF429Q86V71 674 aa10.15□□□□□ -0.78
ERCC3-209ENST00000494464 STX12Q86Y82 276 aa10.15□□□□□ -0.78
ERCC3-209ENST00000494464 OR5T1Q8NG75 326 aa10.15□□□□□ -0.78
ERCC3-209ENST00000494464 TMED6Q8WW62 240 aa10.15□□□□□ -0.78
ERCC3-209ENST00000494464 BSCL2Q96G97 398 aaPredicted RBP10.15□□□□□ -0.78
ERCC3-209ENST00000494464 SMIM3Q9BZL3 60 aa10.15□□□□□ -0.78
ERCC3-209ENST00000494464 WFDC1Q9HC57 220 aa10.15□□□□□ -0.78
ERCC3-209ENST00000494464 ZNF355PQ9NSJ1 428 aa10.15□□□□□ -0.78
ERCC3-209ENST00000494464 MFSD2BA6NFX1 497 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 ACTL6BO94805 426 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 SCAF4O95104 1147 aaKnown RBP10.14□□□□□ -0.79
ERCC3-209ENST00000494464 NXPH3O95157 252 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 OR9G9P0C7N8 305 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 SEC11BP0C7V7 166 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 NHLH2Q02577 135 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 DEFB121Q5J5C9 76 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 HSD17B13Q7Z5P4 300 aaPredicted RBP10.14□□□□□ -0.79
ERCC3-209ENST00000494464 PUSL1Q8N0Z8 303 aaKnown RBP10.14□□□□□ -0.79
ERCC3-209ENST00000494464 EIF4E3Q8N5X7 224 aaKnown RBP10.14□□□□□ -0.79
ERCC3-209ENST00000494464 OR52E5Q8NH55 327 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 SAT2Q96F10 170 aaPredicted RBP10.14□□□□□ -0.79
ERCC3-209ENST00000494464 USMG5Q96IX5 58 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 CITED4Q96RK1 184 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 B9D2Q9BPU9 175 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 ZNF256Q9Y2P7 627 aaPredicted RBP10.14□□□□□ -0.79
ERCC3-209ENST00000494464 TNCP24821 2201 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 DFFBO76075 338 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 KBTBD11O94819 623 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 SPP1P10451 314 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 ZP3P21754 424 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 SULT1A2P50226 295 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 ACSM6Q6P461 480 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 TMEM167AQ8TBQ9 72 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 CIB3Q96Q77 187 aaPredicted RBP10.14□□□□□ -0.79
ERCC3-209ENST00000494464 ATP5SQ99766 215 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 RBKSQ9H477 322 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 PSENENQ9NZ42 101 aa10.14□□□□□ -0.79
ERCC3-209ENST00000494464 SAP30O75446 220 aa10.13□□□□□ -0.79
ERCC3-209ENST00000494464 HRASP01112 189 aa10.13□□□□□ -0.79
ERCC3-209ENST00000494464 APELAP0DMC3 54 aa10.13□□□□□ -0.79
ERCC3-209ENST00000494464 IAPPP10997 89 aa10.13□□□□□ -0.79
ERCC3-209ENST00000494464 MAS1LP35410 378 aa10.13□□□□□ -0.79
ERCC3-209ENST00000494464 C10orf55Q5SWW7 151 aa10.13□□□□□ -0.79
ERCC3-209ENST00000494464 ZNF343Q6P1L6 599 aa10.13□□□□□ -0.79
ERCC3-209ENST00000494464 TMEM14EPQ6UXP3 125 aa10.13□□□□□ -0.79
ERCC3-209ENST00000494464 VKORC1L1Q8N0U8 176 aa10.13□□□□□ -0.79
ERCC3-209ENST00000494464 OR1S2Q8NGQ3 325 aa10.13□□□□□ -0.79
ERCC3-209ENST00000494464 OR5C1Q8NGR4 320 aa10.13□□□□□ -0.79
ERCC3-209ENST00000494464 PRR25Q96S07 402 aa10.13□□□□□ -0.79
ERCC3-209ENST00000494464 AIFM2Q9BRQ8 373 aa10.13□□□□□ -0.79
ERCC3-209ENST00000494464 TMEM140Q9NV12 185 aa10.13□□□□□ -0.79
ERCC3-209ENST00000494464 BET1LQ9NYM9 111 aa10.13□□□□□ -0.79
ERCC3-209ENST00000494464 LSM4Q9Y4Z0 139 aaKnown RBP10.13□□□□□ -0.79
ERCC3-209ENST00000494464 COL7A1Q02388 2944 aa10.12□□□□□ -0.79
ERCC3-209ENST00000494464 TRBV9A0A0B4J1U6 114 aa10.12□□□□□ -0.79
ERCC3-209ENST00000494464 FAM223BA6NKX1 122 aa10.12□□□□□ -0.79
ERCC3-209ENST00000494464 FGF2P09038 288 aa10.12□□□□□ -0.79
ERCC3-209ENST00000494464 RAB5CP51148 216 aa10.12□□□□□ -0.79
ERCC3-209ENST00000494464 HBG1P69891 147 aa10.12□□□□□ -0.79
ERCC3-209ENST00000494464 HBG2P69892 147 aa10.12□□□□□ -0.79
ERCC3-209ENST00000494464 CD69Q07108 199 aa10.12□□□□□ -0.79
ERCC3-209ENST00000494464 FAM223AQ8IWN6 122 aa10.12□□□□□ -0.79
ERCC3-209ENST00000494464 TTC9CQ8N5M4 171 aa10.12□□□□□ -0.79
ERCC3-209ENST00000494464 DTD1Q8TEA8 209 aa10.12□□□□□ -0.79
ERCC3-209ENST00000494464 PARD6GQ9BYG4 376 aaPredicted RBP10.12□□□□□ -0.79
ERCC3-209ENST00000494464 ZNF257Q9Y2Q1 563 aa10.12□□□□□ -0.79
ERCC3-209ENST00000494464 C15orf61A6NNL5 157 aa10.11□□□□□ -0.79
ERCC3-209ENST00000494464 TEX22C9J3V5 150 aa10.11□□□□□ -0.79
ERCC3-209ENST00000494464 H3BP45 60 aa10.11□□□□□ -0.79
ERCC3-209ENST00000494464 RBMXL2O75526 392 aaKnown RBP10.11□□□□□ -0.79
ERCC3-209ENST00000494464 CST7O76096 145 aa10.11□□□□□ -0.79
ERCC3-209ENST00000494464 RPL27AP46776 148 aaKnown RBP10.11□□□□□ -0.79
ERCC3-209ENST00000494464 SPCS3P61009 180 aa10.11□□□□□ -0.79
ERCC3-209ENST00000494464 BLOC1S1P78537 153 aa10.11□□□□□ -0.79
ERCC3-209ENST00000494464 DEFA5Q01523 94 aa10.11□□□□□ -0.79
ERCC3-209ENST00000494464 CLINT1Q14677 625 aa10.11□□□□□ -0.79
ERCC3-209ENST00000494464 TOR2AQ5JU69 321 aa10.11□□□□□ -0.79
ERCC3-209ENST00000494464 OR4A16Q8NH70 328 aa10.11□□□□□ -0.79
ERCC3-209ENST00000494464 OR4A5Q8NH83 315 aa10.11□□□□□ -0.79
ERCC3-209ENST00000494464 GNPNAT1Q96EK6 184 aaPredicted RBP10.11□□□□□ -0.79
ERCC3-209ENST00000494464 QTRT1Q9BXR0 403 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms