RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 TMEM128Q5BJH2 165 aa16.48■□□□□ 0.23
HPS3-207ENST00000494327 SHPKQ9UHJ6 478 aa16.48■□□□□ 0.23
HPS3-207ENST00000494327 CCR6P51684 374 aa16.47■□□□□ 0.23
HPS3-207ENST00000494327 WWC2-AS2Q96NR7 200 aa16.47■□□□□ 0.23
HPS3-207ENST00000494327 ZMAT4Q9H898 229 aa16.47■□□□□ 0.23
HPS3-207ENST00000494327 K7EMT4 169 aa16.46■□□□□ 0.23
HPS3-207ENST00000494327 HTR2BP41595 481 aa16.46■□□□□ 0.23
HPS3-207ENST00000494327 SMCO1Q147U7 214 aa16.46■□□□□ 0.23
HPS3-207ENST00000494327 NMSQ5H8A3 153 aa16.46■□□□□ 0.23
HPS3-207ENST00000494327 PVRIGQ6DKI7 326 aa16.46■□□□□ 0.23
HPS3-207ENST00000494327 DEFB125Q8N687 156 aa16.46■□□□□ 0.23
HPS3-207ENST00000494327 OR52B4Q8NGK2 314 aa16.46■□□□□ 0.23
HPS3-207ENST00000494327 WFDC10AQ9H1F0 79 aa16.46■□□□□ 0.23
HPS3-207ENST00000494327 HIPK2Q9H2X6 1198 aa16.46■□□□□ 0.23
HPS3-207ENST00000494327 FNDC4Q9H6D8 234 aaPredicted RBP16.46■□□□□ 0.23
HPS3-207ENST00000494327 C15orf62A8K5M9 175 aa16.45■□□□□ 0.22
HPS3-207ENST00000494327 CENPXA8MT69 81 aa16.45■□□□□ 0.22
HPS3-207ENST00000494327 OR11H12B2RN74 326 aa16.45■□□□□ 0.22
HPS3-207ENST00000494327 TMEM50AO95807 157 aa16.45■□□□□ 0.22
HPS3-207ENST00000494327 RBMS2Q15434 407 aaKnown RBP16.45■□□□□ 0.22
HPS3-207ENST00000494327 BSXQ3C1V8 233 aa16.45■□□□□ 0.22
HPS3-207ENST00000494327 SLC16A13Q7RTY0 426 aa16.45■□□□□ 0.22
HPS3-207ENST00000494327 CENPSQ8N2Z9 138 aa16.45■□□□□ 0.22
HPS3-207ENST00000494327 ZNF414Q96IQ9 312 aa16.45■□□□□ 0.22
HPS3-207ENST00000494327 RCHY1Q96PM5 261 aa16.45■□□□□ 0.22
HPS3-207ENST00000494327 IGHV3-49A0A0A0MS15 119 aa16.44■□□□□ 0.22
HPS3-207ENST00000494327 TRAV25A0A0B4J276 109 aa16.44■□□□□ 0.22
HPS3-207ENST00000494327 NAP1L6A6NFF2 107 aa16.44■□□□□ 0.22
HPS3-207ENST00000494327 IFITM3Q01628 133 aa16.44■□□□□ 0.22
HPS3-207ENST00000494327 PPP1R1AQ13522 171 aa16.44■□□□□ 0.22
HPS3-207ENST00000494327 ANKRD55Q3KP44 614 aa16.44■□□□□ 0.22
HPS3-207ENST00000494327 SLC24A4Q8NFF2 622 aa16.44■□□□□ 0.22
HPS3-207ENST00000494327 OR1S1Q8NH92 325 aa16.44■□□□□ 0.22
HPS3-207ENST00000494327 C7orf50Q9BRJ6 194 aaKnown RBP16.44■□□□□ 0.22
HPS3-207ENST00000494327 MRPL36Q9P0J6 103 aaKnown RBP16.44■□□□□ 0.22
HPS3-207ENST00000494327 CACFD1Q9UGQ2 172 aa16.44■□□□□ 0.22
HPS3-207ENST00000494327 SFT2D2O95562 160 aa16.43■□□□□ 0.22
HPS3-207ENST00000494327 TNFRSF9Q07011 255 aa16.43■□□□□ 0.22
HPS3-207ENST00000494327 LAMTOR1Q6IAA8 161 aa16.43■□□□□ 0.22
HPS3-207ENST00000494327 RBKSQ9H477 322 aa16.43■□□□□ 0.22
HPS3-207ENST00000494327 SRD5A3Q9H8P0 318 aa16.43■□□□□ 0.22
HPS3-207ENST00000494327 SMPXQ9UHP9 88 aa16.43■□□□□ 0.22
HPS3-207ENST00000494327 TRAV14DV4A0A0A6YYC5 116 aa16.42■□□□□ 0.22
HPS3-207ENST00000494327 PIGBOS1A0A0B4J2F0 54 aa16.42■□□□□ 0.22
HPS3-207ENST00000494327 RPS10-NUDT3A0A1W2PQS6 291 aa16.42■□□□□ 0.22
HPS3-207ENST00000494327 PLA2G10O15496 165 aa16.42■□□□□ 0.22
HPS3-207ENST00000494327 IFNA10P01566 189 aa16.42■□□□□ 0.22
HPS3-207ENST00000494327 DEFA1P59665 94 aa16.42■□□□□ 0.22
HPS3-207ENST00000494327 DEFA3P59666 94 aa16.42■□□□□ 0.22
HPS3-207ENST00000494327 HAGHQ16775 308 aa16.42■□□□□ 0.22
HPS3-207ENST00000494327 C2orf83Q53S99 150 aa16.42■□□□□ 0.22
HPS3-207ENST00000494327 TOMM20LQ6UXN7 152 aa16.42■□□□□ 0.22
HPS3-207ENST00000494327 ZNF600Q6ZNG1 722 aa16.42■□□□□ 0.22
HPS3-207ENST00000494327 TMEM116Q8NCL8 245 aa16.42■□□□□ 0.22
HPS3-207ENST00000494327 RHPN1-AS1Q9BWJ2 59 aa16.42■□□□□ 0.22
HPS3-207ENST00000494327 HSPB7Q9UBY9 170 aa16.42■□□□□ 0.22
HPS3-207ENST00000494327 IGHV3OR16-13A0A075B7E8 117 aa16.41■□□□□ 0.22
HPS3-207ENST00000494327 IGHV3-74A0A0B4J1X5 117 aa16.41■□□□□ 0.22
HPS3-207ENST00000494327 IGHV7-4-1A0A0J9YVY3 117 aa16.41■□□□□ 0.22
HPS3-207ENST00000494327 A0A1B0GU03 582 aa16.41■□□□□ 0.22
HPS3-207ENST00000494327 DUXBA0A1W2PPF3 345 aa16.41■□□□□ 0.22
HPS3-207ENST00000494327 CLN5O75503 358 aa16.41■□□□□ 0.22
HPS3-207ENST00000494327 NPY1RP25929 384 aa16.41■□□□□ 0.22
HPS3-207ENST00000494327 OR4X1Q8NH49 305 aa16.41■□□□□ 0.22
HPS3-207ENST00000494327 DTD1Q8TEA8 209 aa16.41■□□□□ 0.22
HPS3-207ENST00000494327 OR10C1Q96KK4 312 aa16.41■□□□□ 0.22
HPS3-207ENST00000494327 TM2D3Q9BRN9 247 aa16.41■□□□□ 0.22
HPS3-207ENST00000494327 FLVCR2Q9UPI3 526 aa16.41■□□□□ 0.22
HPS3-207ENST00000494327 PUS1Q9Y606 427 aaKnown RBP eCLIP16.41■□□□□ 0.22
HPS3-207ENST00000494327 LYRM1O43325 122 aa16.4■□□□□ 0.22
HPS3-207ENST00000494327 NDUFB6O95139 128 aa16.4■□□□□ 0.22
HPS3-207ENST00000494327 ASAH1Q13510 395 aa16.4■□□□□ 0.22
HPS3-207ENST00000494327 MZT2BQ6NZ67 158 aa16.4■□□□□ 0.22
HPS3-207ENST00000494327 LRTM2Q8N967 370 aa16.4■□□□□ 0.22
HPS3-207ENST00000494327 RNASEH2CQ8TDP1 164 aaKnown RBP16.4■□□□□ 0.22
HPS3-207ENST00000494327 TMEM170AQ8WVE7 144 aa16.4■□□□□ 0.22
HPS3-207ENST00000494327 SPAG8Q99932 426 aaPredicted RBP16.4■□□□□ 0.22
HPS3-207ENST00000494327 GINS3Q9BRX5 216 aa16.4■□□□□ 0.22
HPS3-207ENST00000494327 TBC1D24Q9ULP9 559 aa16.4■□□□□ 0.22
HPS3-207ENST00000494327 CHEK1O14757 476 aa16.39■□□□□ 0.21
HPS3-207ENST00000494327 TSPAN4O14817 238 aa16.39■□□□□ 0.21
HPS3-207ENST00000494327 SCGB2A1O75556 95 aa16.39■□□□□ 0.21
HPS3-207ENST00000494327 HOXB5P09067 269 aa16.39■□□□□ 0.21
HPS3-207ENST00000494327 NOXA1Q86UR1 476 aa16.39■□□□□ 0.21
HPS3-207ENST00000494327 RNF2Q99496 336 aa16.39■□□□□ 0.21
HPS3-207ENST00000494327 RBMY1BA6NDE4 496 aaKnown RBP16.38■□□□□ 0.21
HPS3-207ENST00000494327 RBMY1EA6NEQ0 496 aaKnown RBP16.38■□□□□ 0.21
HPS3-207ENST00000494327 RBMY1DP0C7P1 496 aaKnown RBP16.38■□□□□ 0.21
HPS3-207ENST00000494327 RND2P52198 227 aa16.38■□□□□ 0.21
HPS3-207ENST00000494327 TIGITQ495A1 244 aa16.38■□□□□ 0.21
HPS3-207ENST00000494327 UBQLN2Q9UHD9 624 aa16.38■□□□□ 0.21
HPS3-207ENST00000494327 U3KQ87 197 aa16.38■□□□□ 0.21
HPS3-207ENST00000494327 IGKV3-7A0A075B6H7 116 aa16.37■□□□□ 0.21
HPS3-207ENST00000494327 C9orf170A2RU37 121 aa16.37■□□□□ 0.21
HPS3-207ENST00000494327 SLC25A4P12235 298 aa16.37■□□□□ 0.21
HPS3-207ENST00000494327 UBE2MP61081 183 aaKnown RBP16.37■□□□□ 0.21
HPS3-207ENST00000494327 ETFRF1Q6IPR1 90 aa16.37■□□□□ 0.21
HPS3-207ENST00000494327 PRSS54Q6PEW0 395 aa16.37■□□□□ 0.21
HPS3-207ENST00000494327 LINC00322Q6ZN03 302 aaPredicted RBP16.37■□□□□ 0.21
HPS3-207ENST00000494327 SPATA25Q9BR10 227 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 193.9 ms