RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 FAM166AQ6J272 317 aa15.93■□□□□ 0.14
COL27A1-207ENST00000494090 ANK1P16157 1881 aa15.93■□□□□ 0.14
COL27A1-207ENST00000494090 MESP1Q9BRJ9 268 aa15.93■□□□□ 0.14
COL27A1-207ENST00000494090 SIP14410 1827 aa15.93■□□□□ 0.14
COL27A1-207ENST00000494090 C1QTNF9BB2RNN3 333 aa15.93■□□□□ 0.14
COL27A1-207ENST00000494090 CMC4P56277 68 aaPredicted RBP15.93■□□□□ 0.14
COL27A1-207ENST00000494090 CYTL1Q9NRR1 136 aa15.93■□□□□ 0.14
COL27A1-207ENST00000494090 DUTP33316 252 aaKnown RBP15.92■□□□□ 0.14
COL27A1-207ENST00000494090 SUPT4H1P63272 117 aaKnown RBP15.92■□□□□ 0.14
COL27A1-207ENST00000494090 IGHV1-18A0A0C4DH31 117 aa15.92■□□□□ 0.14
COL27A1-207ENST00000494090 RNASE4P34096 147 aaKnown RBP15.92■□□□□ 0.14
COL27A1-207ENST00000494090 RNF125Q96EQ8 232 aa15.92■□□□□ 0.14
COL27A1-207ENST00000494090 C1QTNF9P0C862 333 aa15.92■□□□□ 0.14
COL27A1-207ENST00000494090 STHQ8IWL8 128 aa15.92■□□□□ 0.14
COL27A1-207ENST00000494090 IGHV3-11P01762 117 aa15.92■□□□□ 0.14
COL27A1-207ENST00000494090 CD59P13987 128 aa15.92■□□□□ 0.14
COL27A1-207ENST00000494090 JKAMPQ9P055 326 aa15.92■□□□□ 0.14
COL27A1-207ENST00000494090 OR9G9P0C7N8 305 aa15.92■□□□□ 0.14
COL27A1-207ENST00000494090 LDLRAD2Q5SZI1 272 aa15.92■□□□□ 0.14
COL27A1-207ENST00000494090 CFAP161Q6P656 301 aa15.92■□□□□ 0.14
COL27A1-207ENST00000494090 C14orf144Q96I85 54 aa15.92■□□□□ 0.14
COL27A1-207ENST00000494090 OSTCQ9NRP0 149 aa15.92■□□□□ 0.14
COL27A1-207ENST00000494090 WDR83OSQ9Y284 106 aa15.92■□□□□ 0.14
COL27A1-207ENST00000494090 A0A1W2PRE2 83 aa15.91■□□□□ 0.14
COL27A1-207ENST00000494090 HIGD1CA8MV81 97 aa15.91■□□□□ 0.14
COL27A1-207ENST00000494090 GGNQ86UU5 652 aa15.91■□□□□ 0.14
COL27A1-207ENST00000494090 SCN8AQ9UQD0 1980 aa15.91■□□□□ 0.14
COL27A1-207ENST00000494090 SERF1AO75920 110 aa15.91■□□□□ 0.14
COL27A1-207ENST00000494090 PRCDQ00LT1 54 aa15.91■□□□□ 0.14
COL27A1-207ENST00000494090 SPRR3Q9UBC9 169 aa15.91■□□□□ 0.14
COL27A1-207ENST00000494090 TRAV8-6A0A0B4J262 113 aa15.91■□□□□ 0.14
COL27A1-207ENST00000494090 TCRBV4S1A1TA0A5B7 111 aa15.91■□□□□ 0.14
COL27A1-207ENST00000494090 WNT2P09544 360 aa15.91■□□□□ 0.14
COL27A1-207ENST00000494090 RNASE7Q9H1E1 156 aaKnown RBP15.9■□□□□ 0.14
COL27A1-207ENST00000494090 DOCK6Q96HP0 2047 aa15.9■□□□□ 0.14
COL27A1-207ENST00000494090 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.9■□□□□ 0.14
COL27A1-207ENST00000494090 UBE2CO00762 179 aa15.9■□□□□ 0.14
COL27A1-207ENST00000494090 TMEM242Q9NWH2 141 aa15.9■□□□□ 0.14
COL27A1-207ENST00000494090 TRAV21A0A0B4J279 112 aa15.9■□□□□ 0.14
COL27A1-207ENST00000494090 HEPN1Q6WQI6 88 aa15.9■□□□□ 0.14
COL27A1-207ENST00000494090 HIST1H2BKO60814 126 aa15.9■□□□□ 0.14
COL27A1-207ENST00000494090 HIST1H2BJP06899 126 aa15.9■□□□□ 0.14
COL27A1-207ENST00000494090 HIST1H2BOP23527 126 aa15.9■□□□□ 0.14
COL27A1-207ENST00000494090 HIST1H2BBP33778 126 aa15.9■□□□□ 0.14
COL27A1-207ENST00000494090 ADMP35318 185 aa15.9■□□□□ 0.14
COL27A1-207ENST00000494090 HIST1H2BDP58876 126 aa15.9■□□□□ 0.14
COL27A1-207ENST00000494090 HIST1H2BCP62807 126 aa15.9■□□□□ 0.14
COL27A1-207ENST00000494090 RHOGP84095 191 aa15.9■□□□□ 0.14
COL27A1-207ENST00000494090 HIST2H2BEQ16778 126 aa15.9■□□□□ 0.14
COL27A1-207ENST00000494090 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.9■□□□□ 0.14
COL27A1-207ENST00000494090 HIST1H2BHQ93079 126 aa15.9■□□□□ 0.14
COL27A1-207ENST00000494090 HIST1H2BNQ99877 126 aa15.9■□□□□ 0.14
COL27A1-207ENST00000494090 HIST1H2BMQ99879 126 aa15.9■□□□□ 0.14
COL27A1-207ENST00000494090 A0A1B0GW64 132 aa15.89■□□□□ 0.13
COL27A1-207ENST00000494090 C18orf15Q96N68 181 aa15.89■□□□□ 0.13
COL27A1-207ENST00000494090 PRDM13Q9H4Q3 707 aa15.89■□□□□ 0.13
COL27A1-207ENST00000494090 IGKV1-27A0A075B6S5 117 aa15.89■□□□□ 0.13
COL27A1-207ENST00000494090 OOSP1A8MZH6 123 aa15.89■□□□□ 0.13
COL27A1-207ENST00000494090 CNTFRP26992 372 aa15.89■□□□□ 0.13
COL27A1-207ENST00000494090 CACNG7P62955 275 aa15.89■□□□□ 0.13
COL27A1-207ENST00000494090 FAM19A2Q8N3H0 131 aa15.89■□□□□ 0.13
COL27A1-207ENST00000494090 CEP290O15078 2479 aa15.89■□□□□ 0.13
COL27A1-207ENST00000494090 NAPSAO96009 420 aa15.89■□□□□ 0.13
COL27A1-207ENST00000494090 C8orf46Q8TAG6 207 aa15.89■□□□□ 0.13
COL27A1-207ENST00000494090 DMRTA2Q96SC8 542 aa15.89■□□□□ 0.13
COL27A1-207ENST00000494090 NRN1Q9NPD7 142 aa15.89■□□□□ 0.13
COL27A1-207ENST00000494090 TRIOBPQ9H2D6 2365 aa15.89■□□□□ 0.13
COL27A1-207ENST00000494090 PLSCR4Q9NRQ2 329 aa15.89■□□□□ 0.13
COL27A1-207ENST00000494090 GBF1Q92538 1859 aa15.89■□□□□ 0.13
COL27A1-207ENST00000494090 EFNB3Q15768 340 aa15.88■□□□□ 0.13
COL27A1-207ENST00000494090 C20orf204Q6ZNR8 217 aa15.88■□□□□ 0.13
COL27A1-207ENST00000494090 EPDR1Q9UM22 224 aa15.88■□□□□ 0.13
COL27A1-207ENST00000494090 PNRC2Q9NPJ4 139 aaKnown RBP15.88■□□□□ 0.13
COL27A1-207ENST00000494090 TRAV1-1A0A0B4J248 108 aa15.88■□□□□ 0.13
COL27A1-207ENST00000494090 IGHV1-46P01743 117 aa15.88■□□□□ 0.13
COL27A1-207ENST00000494090 OR10J3Q5JRS4 329 aa15.88■□□□□ 0.13
COL27A1-207ENST00000494090 FOXC2Q99958 501 aa15.88■□□□□ 0.13
COL27A1-207ENST00000494090 TRGV11A0A075B6L2 103 aa15.88■□□□□ 0.13
COL27A1-207ENST00000494090 RBMY1BA6NDE4 496 aaKnown RBP15.88■□□□□ 0.13
COL27A1-207ENST00000494090 RBMY1EA6NEQ0 496 aaKnown RBP15.88■□□□□ 0.13
COL27A1-207ENST00000494090 C19orf67A6NJJ6 358 aa15.88■□□□□ 0.13
COL27A1-207ENST00000494090 RBMY1DP0C7P1 496 aaKnown RBP15.88■□□□□ 0.13
COL27A1-207ENST00000494090 RBMY1A1P0DJD3 496 aaKnown RBP15.88■□□□□ 0.13
COL27A1-207ENST00000494090 RBMY1CP0DJD4 496 aa15.88■□□□□ 0.13
COL27A1-207ENST00000494090 VSIRQ9H7M9 311 aa15.88■□□□□ 0.13
COL27A1-207ENST00000494090 A0A1W2PRX2 142 aa15.87■□□□□ 0.13
COL27A1-207ENST00000494090 TFF1P04155 84 aa15.87■□□□□ 0.13
COL27A1-207ENST00000494090 LINC00587B1AMM8 73 aa15.87■□□□□ 0.13
COL27A1-207ENST00000494090 PPBPP02775 128 aa15.87■□□□□ 0.13
COL27A1-207ENST00000494090 EFNA4P52798 201 aa15.87■□□□□ 0.13
COL27A1-207ENST00000494090 BEX4Q9NWD9 120 aaPredicted RBP15.87■□□□□ 0.13
COL27A1-207ENST00000494090 OVOL1O14753 267 aa15.87■□□□□ 0.13
COL27A1-207ENST00000494090 NUDT10Q8NFP7 164 aa15.87■□□□□ 0.13
COL27A1-207ENST00000494090 OCC1Q8TAD7 63 aa15.87■□□□□ 0.13
COL27A1-207ENST00000494090 ST20Q9HBF5 79 aa15.87■□□□□ 0.13
COL27A1-207ENST00000494090 LINC01549A6NIU2 74 aa15.87■□□□□ 0.13
COL27A1-207ENST00000494090 TDGF1P13385 188 aa15.87■□□□□ 0.13
COL27A1-207ENST00000494090 GNG5P63218 68 aa15.87■□□□□ 0.13
COL27A1-207ENST00000494090 TTC32Q5I0X7 151 aa15.87■□□□□ 0.13
COL27A1-207ENST00000494090 ZNF257Q9Y2Q1 563 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms