RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 S1PR2O95136 353 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 NDUFB4O95168 129 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 ZNF705DP0CH99 300 aaPredicted RBP8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 ZNF705BP0CI00 300 aaPredicted RBP8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 ADMP35318 185 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 CHRNA7P36544 502 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 WNT5AP41221 380 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 RPL29P47914 159 aaKnown RBP8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 LGALS4P56470 323 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 EFNB3Q15768 340 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 ZNF718Q3SXZ3 478 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 TPTE2P1Q5T6R2 138 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 C19orf35Q6ZS72 473 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 ZCCHC24Q8N2G6 241 aaKnown RBP8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 PPP1R35Q8TAP8 253 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 NEU4Q8WWR8 484 aaPredicted RBP8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 BCL2L2Q92843 193 aaPredicted RBP8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 SLC35E1Q96K37 410 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 CHRDL1Q9BU40 450 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 RAB1BQ9H0U4 201 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 NPVFQ9HCQ7 196 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 OSTCQ9NRP0 149 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 CLN8Q9UBY8 286 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 C12orf77C9JDV5 145 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 LYNX1G3V0Z9 82 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 SIRPB1O00241 398 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 HLA-DQA1P01909 254 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 HBZP02008 142 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 LYNX1P0DP58 116 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 CA6P23280 308 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 NPPCP23582 126 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 BRS3P32247 399 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 G6PCP35575 357 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 ZNF90Q03938 601 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 IZUMO4Q1ZYL8 232 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 SMIM21Q3B7S5 101 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 CST9LP1Q5W188 147 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 FBXW9Q5XUX1 488 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 OR5B3Q8NH48 314 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 OR1L1Q8NH94 360 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 ADTRPQ96IZ2 230 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 GGTLC1Q9BX51 225 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 COMMD5Q9GZQ3 224 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 MRPL18Q9H0U6 180 aaKnown RBP8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 MRPL27Q9P0M9 148 aaKnown RBP8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 SLC45A2Q9UMX9 530 aa8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 LSM4Q9Y4Z0 139 aaKnown RBP8.6□□□□□ -1.03
PDLIM1-205ENST00000493949 LOC105371242A0A075B767 164 aa8.59□□□□□ -1.03
PDLIM1-205ENST00000493949 TRAV39A0A0B4J263 110 aa8.59□□□□□ -1.03
PDLIM1-205ENST00000493949 PRSS46E5RG02 174 aa8.59□□□□□ -1.03
PDLIM1-205ENST00000493949 PRTN3P24158 256 aa8.59□□□□□ -1.03
PDLIM1-205ENST00000493949 GCHFRP30047 84 aa8.59□□□□□ -1.03
PDLIM1-205ENST00000493949 RAB7AP51149 207 aa8.59□□□□□ -1.03
PDLIM1-205ENST00000493949 PMCHL1Q16048 86 aa8.59□□□□□ -1.03
PDLIM1-205ENST00000493949 LINC00528Q8N1L1 170 aa8.59□□□□□ -1.03
PDLIM1-205ENST00000493949 C17orf78Q8N4C9 275 aa8.59□□□□□ -1.03
PDLIM1-205ENST00000493949 SIGLECL1Q8N7X8 197 aa8.59□□□□□ -1.03
PDLIM1-205ENST00000493949 C1orf162Q8NEQ5 155 aaPredicted RBP8.59□□□□□ -1.03
PDLIM1-205ENST00000493949 OR4A16Q8NH70 328 aa8.59□□□□□ -1.03
PDLIM1-205ENST00000493949 WIPF2Q8TF74 440 aaPredicted RBP8.59□□□□□ -1.03
PDLIM1-205ENST00000493949 TMEM208Q9BTX3 173 aa8.59□□□□□ -1.03
PDLIM1-205ENST00000493949 UQCR10Q9UDW1 63 aa8.59□□□□□ -1.03
PDLIM1-205ENST00000493949 ZFP30Q9Y2G7 519 aa8.59□□□□□ -1.03
PDLIM1-205ENST00000493949 A0A096LPE4 126 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 A0A1W2PPZ6 126 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 ISLRO14498 428 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 RAMP3O60896 148 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 RHBDL1O75783 438 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 IL6RP08887 468 aaPredicted RBP8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 ARL14EPLP0DKL9 152 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 ZNF25P17030 456 aaPredicted RBP8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 VDAC2P45880 294 aaPredicted RBP8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 ATP5G3P48201 142 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 THBS3P49746 956 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 TAS2R45P59539 299 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 RPL30P62888 115 aaKnown RBP8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 CX3CL1P78423 397 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 POU2AF1Q16633 256 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 SPATA46Q5T0L3 261 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 PRAMEF5Q5TYX0 476 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 PRAMEF6Q5VXH4 476 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 TEPPQ6URK8 271 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 PQLC2Q6ZP29 291 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 MYPOPQ86VE0 399 aaPredicted RBP8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 OR2D3Q8NGH3 330 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 OR4S2Q8NH73 311 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 SMIM12Q96EX1 92 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 KCNS1Q96KK3 526 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 ZNF488Q96MN9 340 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 MRPL32Q9BYC8 188 aaKnown RBP8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 SAMD10Q9BYL1 202 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 LPAR2Q9HBW0 351 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 IL19Q9UHD0 177 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 PPIAL4AQ9Y536 164 aa8.58□□□□□ -1.04
PDLIM1-205ENST00000493949 DNAH3Q8TD57 4116 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 C17orf98A8MV24 154 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 ZNF253O75346 499 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 RBMXL2O75526 392 aaKnown RBP8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 FSHBP01225 129 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 DUTP33316 252 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms