RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 NECAP2Q9NVZ3 263 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 RPUSD1Q9UJJ7 312 aaKnown RBP6.63□□□□□ -1.35
HDAC6-234ENST00000493923 TIMM9Q9Y5J7 89 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 TRAV38-1A0A0B4J264 116 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 IGHV1-69DA0A0B4J2H0 117 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 ZNF850A8MQ14 1090 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 P2RY10O00398 339 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 SRSF10O75494 262 aaKnown RBP6.62□□□□□ -1.35
HDAC6-234ENST00000493923 RHBDL1O75783 438 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 MPIG6BO95866 241 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 IGHV1-69P01742 117 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 STAG3L3P0CL85 134 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 PI3P19957 117 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 NPBWR2P48146 333 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 PIGPP57054 158 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 GRB2P62993 217 aaKnown RBP6.62□□□□□ -1.35
HDAC6-234ENST00000493923 CNN3Q15417 329 aaKnown RBP6.62□□□□□ -1.35
HDAC6-234ENST00000493923 OR10J3Q5JRS4 329 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 SPIN3Q5JUX0 258 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 STUMQ69YW2 141 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 OR4A47Q6IF82 309 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 MRPL54Q6P161 138 aaKnown RBP6.62□□□□□ -1.35
HDAC6-234ENST00000493923 WDR73Q6P4I2 378 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 VMO1Q7Z5L0 202 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 BAGE3Q86Y29 109 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 BAGE2Q86Y30 109 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.62□□□□□ -1.35
HDAC6-234ENST00000493923 LY6G5BQ8NDX9 201 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 OR5A2Q8NGI9 324 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 OR5C1Q8NGR4 320 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 ZNF596Q8TC21 504 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 RTN4IP1Q8WWV3 396 aaPredicted RBP6.62□□□□□ -1.35
HDAC6-234ENST00000493923 WFDC12Q8WWY7 111 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 OR5P3Q8WZ94 311 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 GAFA1Q96PS6 74 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 PARLQ9H300 379 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 PRR13Q9NZ81 148 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 KAAG1Q9UBP8 84 aa6.62□□□□□ -1.35
HDAC6-234ENST00000493923 PEF1Q9UBV8 284 aaKnown RBP6.62□□□□□ -1.35
HDAC6-234ENST00000493923 TBL2Q9Y4P3 447 aaKnown RBP6.62□□□□□ -1.35
HDAC6-234ENST00000493923 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.61□□□□□ -1.35
HDAC6-234ENST00000493923 IGSF23A1L1A6 192 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 FAM24AA6NFZ4 105 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 ANKRD30BLA7E2S9 258 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 M0QZ24 198 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 RBFOX2O43251 390 aaKnown RBP eCLIP6.61□□□□□ -1.35
HDAC6-234ENST00000493923 ZNF737O75373 536 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 DYNLT3P51808 116 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 PRRX1P54821 245 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 RHOBP62745 196 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 HBG1P69891 147 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 HBG2P69892 147 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 FAM162BQ5T6X4 162 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 HCP5Q6MZN7 132 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 UNQ5815/PRO19632Q6UWF5 114 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 GLIPR1L1Q6UWM5 242 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 SCCPDHQ8NBX0 429 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 NECAP1Q8NC96 275 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 OR4P4Q8NGL7 312 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 PIGCQ92535 297 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 AJUBAQ96IF1 538 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 ZNF488Q96MN9 340 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 RAB40CQ96S21 281 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 ABHD14AQ9BUJ0 271 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 SSBP4Q9BWG4 385 aaPredicted RBP6.61□□□□□ -1.35
HDAC6-234ENST00000493923 TM2D1Q9BX74 207 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 MEGF9Q9H1U4 602 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 FAM206AQ9NX38 181 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 PGPEP1Q9NXJ5 209 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 ONECUT1Q9UBC0 465 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 ZNF391Q9UJN7 358 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 OR51B2Q9Y5P1 312 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 DSCAML1Q8TD84 2053 aa6.61□□□□□ -1.35
HDAC6-234ENST00000493923 IGKV1D-17A0A075B6S4 117 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 G3V4G9 280 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 M0R1X1 148 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 DEGS1O15121 323 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 PDE6DO43924 150 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 S1PR2O95136 353 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 OR10J4P0C629 311 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 SLC25A6P12236 298 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 IER3P46695 156 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 GPM6AP51674 278 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 PLAC9Q5JTB6 97 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 FAM78BQ5VT40 261 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 ZNF788Q6ZQV5 615 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 TMEM256Q8N2U0 113 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 BORCS7Q96B45 105 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 ARHGAP5-AS1Q96IT6 56 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 PMCHL2Q9BQD1 86 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 NICN1Q9BSH3 213 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 DCTN5Q9BTE1 182 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 ST6GALNAC5Q9BVH7 336 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 PECRQ9BY49 303 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 ZNF286AQ9HBT8 521 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 ANXA10Q9UJ72 324 aa6.6□□□□□ -1.35
HDAC6-234ENST00000493923 TRAV9-2A0A087WT02 112 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 CTXND1A0A1B0GTU2 59 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 FOXI3A8MTJ6 420 aaPredicted RBP6.59□□□□□ -1.35
HDAC6-234ENST00000493923 SDCBPO00560 298 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms