RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 MYOD1P15172 320 aa11.19□□□□□ -0.62
VCP-207ENST00000493886 CEACAM3P40198 252 aa11.19□□□□□ -0.62
VCP-207ENST00000493886 HIF1ANQ9NWT6 349 aa11.19□□□□□ -0.62
VCP-207ENST00000493886 NAGKQ9UJ70 344 aa11.19□□□□□ -0.62
VCP-207ENST00000493886 UPK2O00526 184 aa11.19□□□□□ -0.62
VCP-207ENST00000493886 IL3RAP26951 378 aa11.19□□□□□ -0.62
VCP-207ENST00000493886 TREML4Q6UXN2 200 aa11.19□□□□□ -0.62
VCP-207ENST00000493886 LINC01551Q86U37 167 aa11.19□□□□□ -0.62
VCP-207ENST00000493886 GNG7O60262 68 aa11.19□□□□□ -0.62
VCP-207ENST00000493886 APOA2P02652 100 aa11.19□□□□□ -0.62
VCP-207ENST00000493886 NPY1RP25929 384 aa11.19□□□□□ -0.62
VCP-207ENST00000493886 DLX6P56179 175 aa11.19□□□□□ -0.62
VCP-207ENST00000493886 TMEM155Q4W5P6 130 aa11.19□□□□□ -0.62
VCP-207ENST00000493886 OR10X1Q8NGY0 326 aa11.19□□□□□ -0.62
VCP-207ENST00000493886 PYGO2Q9BRQ0 406 aa11.19□□□□□ -0.62
VCP-207ENST00000493886 CST9LQ9H4G1 147 aa11.19□□□□□ -0.62
VCP-207ENST00000493886 J3QR06 171 aa11.18□□□□□ -0.62
VCP-207ENST00000493886 MPDU1O75352 247 aa11.18□□□□□ -0.62
VCP-207ENST00000493886 ZNF672Q499Z4 452 aaPredicted RBP11.18□□□□□ -0.62
VCP-207ENST00000493886 OR10W1Q8NGF6 305 aa11.18□□□□□ -0.62
VCP-207ENST00000493886 NAV3Q8IVL0 2385 aa11.18□□□□□ -0.62
VCP-207ENST00000493886 ATRXP46100 2492 aa11.18□□□□□ -0.62
VCP-207ENST00000493886 ANKHD1Q8IWZ3 2542 aaKnown RBP11.18□□□□□ -0.62
VCP-207ENST00000493886 TRBV20OR9-2A0A075B6H5 130 aa11.18□□□□□ -0.62
VCP-207ENST00000493886 SCO2A0A1W2PP80 73 aa11.18□□□□□ -0.62
VCP-207ENST00000493886 LYNX1G3V0Z9 82 aa11.18□□□□□ -0.62
VCP-207ENST00000493886 H0YJW9 148 aa11.18□□□□□ -0.62
VCP-207ENST00000493886 LYNX1P0DP58 116 aa11.18□□□□□ -0.62
VCP-207ENST00000493886 REG1BP48304 166 aa11.18□□□□□ -0.62
VCP-207ENST00000493886 MRPL41Q8IXM3 137 aaKnown RBP11.18□□□□□ -0.62
VCP-207ENST00000493886 LINC00311Q8N616 119 aa11.18□□□□□ -0.62
VCP-207ENST00000493886 BET1LQ9NYM9 111 aa11.18□□□□□ -0.62
VCP-207ENST00000493886 ZNF257Q9Y2Q1 563 aa11.18□□□□□ -0.62
VCP-207ENST00000493886 ABCA1O95477 2261 aa11.17□□□□□ -0.62
VCP-207ENST00000493886 NBASA2RRP1 2371 aa11.17□□□□□ -0.62
VCP-207ENST00000493886 PLXNB1O43157 2135 aa11.17□□□□□ -0.62
VCP-207ENST00000493886 NDUFB8O95169 186 aa11.17□□□□□ -0.62
VCP-207ENST00000493886 SAA1P0DJI8 122 aaPredicted RBP11.17□□□□□ -0.62
VCP-207ENST00000493886 SPATA31B1PQ5VZV4 182 aa11.17□□□□□ -0.62
VCP-207ENST00000493886 C8orf31Q8N9H6 132 aa11.17□□□□□ -0.62
VCP-207ENST00000493886 OR5AN1Q8NGI8 311 aa11.17□□□□□ -0.62
VCP-207ENST00000493886 OSR1Q8TAX0 266 aaPredicted RBP11.17□□□□□ -0.62
VCP-207ENST00000493886 MGST2Q99735 147 aa11.17□□□□□ -0.62
VCP-207ENST00000493886 PXMP4Q9Y6I8 212 aa11.17□□□□□ -0.62
VCP-207ENST00000493886 CA2P00918 260 aa11.17□□□□□ -0.62
VCP-207ENST00000493886 PRCDQ00LT1 54 aa11.17□□□□□ -0.62
VCP-207ENST00000493886 TPTE2P1Q5T6R2 138 aa11.17□□□□□ -0.62
VCP-207ENST00000493886 ANAPC16Q96DE5 110 aa11.17□□□□□ -0.62
VCP-207ENST00000493886 HARBI1Q96MB7 349 aa11.17□□□□□ -0.62
VCP-207ENST00000493886 PLEKHA3Q9HB20 300 aa11.17□□□□□ -0.62
VCP-207ENST00000493886 TACC2O95359 2948 aa11.17□□□□□ -0.62
VCP-207ENST00000493886 ACTL10Q5JWF8 245 aa11.16□□□□□ -0.62
VCP-207ENST00000493886 FAM71F2Q6NXP2 309 aa11.16□□□□□ -0.62
VCP-207ENST00000493886 TMEM186Q96B77 213 aa11.16□□□□□ -0.62
VCP-207ENST00000493886 MEGF9Q9H1U4 602 aa11.16□□□□□ -0.62
VCP-207ENST00000493886 OPRK1P41145 380 aa11.16□□□□□ -0.62
VCP-207ENST00000493886 DIAPH2-AS1Q14236 149 aa11.16□□□□□ -0.62
VCP-207ENST00000493886 KCNIP4Q6PIL6 250 aa11.16□□□□□ -0.62
VCP-207ENST00000493886 SGMS2Q8NHU3 365 aa11.16□□□□□ -0.62
VCP-207ENST00000493886 SLC35E1Q96K37 410 aa11.16□□□□□ -0.62
VCP-207ENST00000493886 NABP2Q9BQ15 211 aa11.16□□□□□ -0.62
VCP-207ENST00000493886 NPVFQ9HCQ7 196 aa11.16□□□□□ -0.62
VCP-207ENST00000493886 TEX50A0A1B0GTY4 177 aa11.15□□□□□ -0.62
VCP-207ENST00000493886 GRIFINA4D1Z8 144 aa11.15□□□□□ -0.62
VCP-207ENST00000493886 ACTL6BO94805 426 aa11.15□□□□□ -0.62
VCP-207ENST00000493886 IGHV1-8P0DP01 117 aa11.15□□□□□ -0.62
VCP-207ENST00000493886 TMEM177Q53S58 311 aa11.15□□□□□ -0.62
VCP-207ENST00000493886 TMEM256Q8N2U0 113 aa11.15□□□□□ -0.62
VCP-207ENST00000493886 OR9G1Q8NH87 305 aa11.15□□□□□ -0.62
VCP-207ENST00000493886 ST6GALNAC6Q969X2 333 aa11.15□□□□□ -0.62
VCP-207ENST00000493886 FLYWCH2Q96CP2 140 aaKnown RBP11.15□□□□□ -0.62
VCP-207ENST00000493886 GGTLC1Q9BX51 225 aa11.15□□□□□ -0.62
VCP-207ENST00000493886 FKBP11Q9NYL4 201 aa11.15□□□□□ -0.62
VCP-207ENST00000493886 ABCA4P78363 2273 aa11.15□□□□□ -0.62
VCP-207ENST00000493886 BRI3O95415 125 aa11.15□□□□□ -0.62
VCP-207ENST00000493886 CD33P20138 364 aa11.15□□□□□ -0.62
VCP-207ENST00000493886 OR2D3Q8NGH3 330 aa11.15□□□□□ -0.62
VCP-207ENST00000493886 RALYQ9UKM9 306 aaKnown RBP11.15□□□□□ -0.62
VCP-207ENST00000493886 LSM4Q9Y4Z0 139 aaKnown RBP11.15□□□□□ -0.62
VCP-207ENST00000493886 TRAPPC1Q9Y5R8 145 aa11.15□□□□□ -0.62
VCP-207ENST00000493886 A0A1B0GV72 72 aa11.15□□□□□ -0.63
VCP-207ENST00000493886 OR5B3Q8NH48 314 aa11.15□□□□□ -0.63
VCP-207ENST00000493886 C1orf159Q96HA4 380 aa11.15□□□□□ -0.63
VCP-207ENST00000493886 YTHDF2Q9Y5A9 579 aaKnown RBP11.15□□□□□ -0.63
VCP-207ENST00000493886 PPOXP50336 477 aa11.14□□□□□ -0.63
VCP-207ENST00000493886 CNN1P51911 297 aaKnown RBP11.14□□□□□ -0.63
VCP-207ENST00000493886 ZNF137PP52743 207 aa11.14□□□□□ -0.63
VCP-207ENST00000493886 HERV-K104P63124 156 aa11.14□□□□□ -0.63
VCP-207ENST00000493886 C1orf194Q5T5A4 169 aa11.14□□□□□ -0.63
VCP-207ENST00000493886 SAMD13Q5VXD3 122 aa11.14□□□□□ -0.63
VCP-207ENST00000493886 OR4C13Q8NGP0 309 aa11.14□□□□□ -0.63
VCP-207ENST00000493886 IMMP2LQ96T52 175 aa11.14□□□□□ -0.63
VCP-207ENST00000493886 MDFIC2A0A1B0GVS7 189 aa11.14□□□□□ -0.63
VCP-207ENST00000493886 SLC17A3O00476 420 aa11.14□□□□□ -0.63
VCP-207ENST00000493886 NUPR1O60356 82 aa11.14□□□□□ -0.63
VCP-207ENST00000493886 FOXH1O75593 365 aa11.14□□□□□ -0.63
VCP-207ENST00000493886 VENTXO95231 258 aa11.14□□□□□ -0.63
VCP-207ENST00000493886 SCGB1D1O95968 90 aa11.14□□□□□ -0.63
VCP-207ENST00000493886 MOB3BQ86TA1 216 aa11.14□□□□□ -0.63
VCP-207ENST00000493886 PDPNQ86YL7 162 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms