RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 PDCD10Q9BUL8 212 aa7.96□□□□□ -1.14
COL6A3-214ENST00000493608 EDA2RQ9HAV5 297 aa7.96□□□□□ -1.14
COL6A3-214ENST00000493608 MCUBQ9NWR8 336 aa7.96□□□□□ -1.14
COL6A3-214ENST00000493608 CSMD3Q7Z407 3707 aa7.95□□□□□ -1.14
COL6A3-214ENST00000493608 IGKV3-7A0A075B6H7 116 aa7.95□□□□□ -1.14
COL6A3-214ENST00000493608 IGHV3OR16-13A0A075B7E8 117 aa7.95□□□□□ -1.14
COL6A3-214ENST00000493608 IGHV3-74A0A0B4J1X5 117 aa7.95□□□□□ -1.14
COL6A3-214ENST00000493608 TRAV25A0A0B4J276 109 aa7.95□□□□□ -1.14
COL6A3-214ENST00000493608 ANKRD20A5PA0PJZ0 165 aa7.95□□□□□ -1.14
COL6A3-214ENST00000493608 GSTZ1O43708 216 aaPredicted RBP7.95□□□□□ -1.14
COL6A3-214ENST00000493608 GNG7O60262 68 aa7.95□□□□□ -1.14
COL6A3-214ENST00000493608 ATG12O94817 140 aa7.95□□□□□ -1.14
COL6A3-214ENST00000493608 NXPH3O95157 252 aa7.95□□□□□ -1.14
COL6A3-214ENST00000493608 CDS2O95674 445 aa7.95□□□□□ -1.14
COL6A3-214ENST00000493608 RNASE2P10153 161 aaKnown RBP7.95□□□□□ -1.14
COL6A3-214ENST00000493608 HOXA1P49639 335 aaPredicted RBP7.95□□□□□ -1.14
COL6A3-214ENST00000493608 ANKRD55Q3KP44 614 aa7.95□□□□□ -1.14
COL6A3-214ENST00000493608 ZNF114Q8NC26 417 aa7.95□□□□□ -1.14
COL6A3-214ENST00000493608 GPR146Q96CH1 333 aa7.95□□□□□ -1.14
COL6A3-214ENST00000493608 ATP6V0BQ99437 205 aa7.95□□□□□ -1.14
COL6A3-214ENST00000493608 SOSTQ9BQB4 213 aa7.95□□□□□ -1.14
COL6A3-214ENST00000493608 TMEM222Q9H0R3 208 aa7.95□□□□□ -1.14
COL6A3-214ENST00000493608 ENY2Q9NPA8 101 aa7.95□□□□□ -1.14
COL6A3-214ENST00000493608 RSL24D1Q9UHA3 163 aaKnown RBP7.95□□□□□ -1.14
COL6A3-214ENST00000493608 CRYM-AS1A6NIL9 109 aa7.94□□□□□ -1.14
COL6A3-214ENST00000493608 K7EMT4 169 aa7.94□□□□□ -1.14
COL6A3-214ENST00000493608 TFPI2P48307 235 aa7.94□□□□□ -1.14
COL6A3-214ENST00000493608 RELQ04864 619 aaPredicted RBP7.94□□□□□ -1.14
COL6A3-214ENST00000493608 PYDC2Q56P42 97 aa7.94□□□□□ -1.14
COL6A3-214ENST00000493608 TMEM268Q5VZI3 342 aa7.94□□□□□ -1.14
COL6A3-214ENST00000493608 LAMTOR1Q6IAA8 161 aa7.94□□□□□ -1.14
COL6A3-214ENST00000493608 TMEM116Q8NCL8 245 aa7.94□□□□□ -1.14
COL6A3-214ENST00000493608 DUSP18Q8NEJ0 188 aa7.94□□□□□ -1.14
COL6A3-214ENST00000493608 RBPMSQ93062 196 aaKnown RBP7.94□□□□□ -1.14
COL6A3-214ENST00000493608 TMEM230Q96A57 120 aa7.94□□□□□ -1.14
COL6A3-214ENST00000493608 RNF2Q99496 336 aa7.94□□□□□ -1.14
COL6A3-214ENST00000493608 TXN2Q99757 166 aa7.94□□□□□ -1.14
COL6A3-214ENST00000493608 PRRT1Q99946 306 aa7.94□□□□□ -1.14
COL6A3-214ENST00000493608 RHPN1-AS1Q9BWJ2 59 aa7.94□□□□□ -1.14
COL6A3-214ENST00000493608 NXF2Q9GZY0 626 aaKnown RBP7.94□□□□□ -1.14
COL6A3-214ENST00000493608 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.94□□□□□ -1.14
COL6A3-214ENST00000493608 MRPL36Q9P0J6 103 aaKnown RBP7.94□□□□□ -1.14
COL6A3-214ENST00000493608 RABL2AQ9UBK7 228 aaPredicted RBP7.94□□□□□ -1.14
COL6A3-214ENST00000493608 CACNG5Q9UF02 275 aa7.94□□□□□ -1.14
COL6A3-214ENST00000493608 SMPXQ9UHP9 88 aa7.94□□□□□ -1.14
COL6A3-214ENST00000493608 RABL2BQ9UNT1 228 aa7.94□□□□□ -1.14
COL6A3-214ENST00000493608 TENM2Q9NT68 2774 aa7.93□□□□□ -1.14
COL6A3-214ENST00000493608 LOC102724200A0A096LPH7 203 aaPredicted RBP7.93□□□□□ -1.14
COL6A3-214ENST00000493608 TRAV14DV4A0A0A6YYC5 116 aa7.93□□□□□ -1.14
COL6A3-214ENST00000493608 IGHV3-66A0A0C4DH42 116 aa7.93□□□□□ -1.14
COL6A3-214ENST00000493608 IGHV7-4-1A0A0J9YVY3 117 aa7.93□□□□□ -1.14
COL6A3-214ENST00000493608 C15orf62A8K5M9 175 aa7.93□□□□□ -1.14
COL6A3-214ENST00000493608 CHEK1O14757 476 aa7.93□□□□□ -1.14
COL6A3-214ENST00000493608 TSPAN4O14817 238 aa7.93□□□□□ -1.14
COL6A3-214ENST00000493608 B3GALNT1O75752 331 aa7.93□□□□□ -1.14
COL6A3-214ENST00000493608 TMEM50AO95807 157 aa7.93□□□□□ -1.14
COL6A3-214ENST00000493608 APOHP02749 345 aaPredicted RBP7.93□□□□□ -1.14
COL6A3-214ENST00000493608 AKR1C4P17516 323 aa7.93□□□□□ -1.14
COL6A3-214ENST00000493608 FCGR2BP31994 310 aaPredicted RBP7.93□□□□□ -1.14
COL6A3-214ENST00000493608 NPBWR1P48145 328 aa7.93□□□□□ -1.14
COL6A3-214ENST00000493608 SUB1P53999 127 aaKnown RBP eCLIP7.93□□□□□ -1.14
COL6A3-214ENST00000493608 DHODHQ02127 395 aa7.93□□□□□ -1.14
COL6A3-214ENST00000493608 SURF2Q15527 256 aaPredicted RBP7.93□□□□□ -1.14
COL6A3-214ENST00000493608 TOMM20LQ6UXN7 152 aa7.93□□□□□ -1.14
COL6A3-214ENST00000493608 GBGT1Q8N5D6 347 aa7.93□□□□□ -1.14
COL6A3-214ENST00000493608 SPAG8Q99932 426 aaPredicted RBP7.93□□□□□ -1.14
COL6A3-214ENST00000493608 KRTAP4-9Q9BYQ8 210 aa7.93□□□□□ -1.14
COL6A3-214ENST00000493608 FNDC4Q9H6D8 234 aaPredicted RBP7.93□□□□□ -1.14
COL6A3-214ENST00000493608 HEYLQ9NQ87 328 aaPredicted RBP7.93□□□□□ -1.14
COL6A3-214ENST00000493608 SCP2D1Q9UJQ7 156 aa7.93□□□□□ -1.14
COL6A3-214ENST00000493608 INS-IGF2F8WCM5 200 aa7.92□□□□□ -1.14
COL6A3-214ENST00000493608 OPRK1P41145 380 aa7.92□□□□□ -1.14
COL6A3-214ENST00000493608 SPCS3P61009 180 aa7.92□□□□□ -1.14
COL6A3-214ENST00000493608 TMEM187Q14656 261 aa7.92□□□□□ -1.14
COL6A3-214ENST00000493608 ODF3L2Q3SX64 289 aa7.92□□□□□ -1.14
COL6A3-214ENST00000493608 PVRIGQ6DKI7 326 aa7.92□□□□□ -1.14
COL6A3-214ENST00000493608 APRG1Q8IVJ8 170 aa7.92□□□□□ -1.14
COL6A3-214ENST00000493608 FAM219AQ8IW50 185 aa7.92□□□□□ -1.14
COL6A3-214ENST00000493608 LILRB2Q8N423 598 aa7.92□□□□□ -1.14
COL6A3-214ENST00000493608 OR10C1Q96KK4 312 aa7.92□□□□□ -1.14
COL6A3-214ENST00000493608 GGTLC1Q9BX51 225 aa7.92□□□□□ -1.14
COL6A3-214ENST00000493608 KCNIP3Q9Y2W7 256 aa7.92□□□□□ -1.14
COL6A3-214ENST00000493608 PUS1Q9Y606 427 aaKnown RBP eCLIP7.92□□□□□ -1.14
COL6A3-214ENST00000493608 TMEM56-RWDD3S4R434 201 aa7.92□□□□□ -1.14
COL6A3-214ENST00000493608 A0A1B0GU03 582 aa7.91□□□□□ -1.14
COL6A3-214ENST00000493608 CEBPZOSA8MTT3 80 aa7.91□□□□□ -1.14
COL6A3-214ENST00000493608 RPL35AP18077 110 aaKnown RBP7.91□□□□□ -1.14
COL6A3-214ENST00000493608 SUPT4H1P63272 117 aaKnown RBP7.91□□□□□ -1.14
COL6A3-214ENST00000493608 ZNF600Q6ZNG1 722 aa7.91□□□□□ -1.14
COL6A3-214ENST00000493608 LYZL2Q7Z4W2 148 aa7.91□□□□□ -1.14
COL6A3-214ENST00000493608 OR52E5Q8NH55 327 aa7.91□□□□□ -1.14
COL6A3-214ENST00000493608 ST8SIA2Q92186 375 aa7.91□□□□□ -1.14
COL6A3-214ENST00000493608 SCGB3A2Q96PL1 93 aa7.91□□□□□ -1.14
COL6A3-214ENST00000493608 OR4C46A6NHA9 309 aa7.9□□□□□ -1.14
COL6A3-214ENST00000493608 CLN5O75503 358 aa7.9□□□□□ -1.14
COL6A3-214ENST00000493608 S100A5P33763 92 aa7.9□□□□□ -1.14
COL6A3-214ENST00000493608 KLF9Q13886 244 aaPredicted RBP7.9□□□□□ -1.14
COL6A3-214ENST00000493608 BSXQ3C1V8 233 aa7.9□□□□□ -1.14
COL6A3-214ENST00000493608 TIGITQ495A1 244 aa7.9□□□□□ -1.14
COL6A3-214ENST00000493608 TCF24Q7RTU0 167 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms