RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 CCL17Q92583 94 aa12.72□□□□□ -0.37
CACUL1-206ENST00000493518 PMCHL2Q9BQD1 86 aa12.72□□□□□ -0.37
CACUL1-206ENST00000493518 TPPP3Q9BW30 176 aa12.72□□□□□ -0.37
CACUL1-206ENST00000493518 TEX50A0A1B0GTY4 177 aa12.71□□□□□ -0.37
CACUL1-206ENST00000493518 CSN3P07498 182 aa12.71□□□□□ -0.37
CACUL1-206ENST00000493518 RBMXL3Q8N7X1 1067 aaKnown RBP12.71□□□□□ -0.37
CACUL1-206ENST00000493518 PRR7Q8TB68 274 aa12.71□□□□□ -0.37
CACUL1-206ENST00000493518 IGFBPL1Q8WX77 278 aa12.71□□□□□ -0.37
CACUL1-206ENST00000493518 KBTBD11-OT1A0A1B0GTJ5 212 aa12.71□□□□□ -0.37
CACUL1-206ENST00000493518 STPG4Q8N801 248 aa12.71□□□□□ -0.37
CACUL1-206ENST00000493518 OR1B1Q8NGR6 318 aa12.71□□□□□ -0.37
CACUL1-206ENST00000493518 SARAFQ96BY9 339 aa12.71□□□□□ -0.37
CACUL1-206ENST00000493518 DPRXA6NFQ7 191 aa12.71□□□□□ -0.38
CACUL1-206ENST00000493518 ISLRO14498 428 aa12.71□□□□□ -0.38
CACUL1-206ENST00000493518 ZNF138P52744 262 aa12.71□□□□□ -0.38
CACUL1-206ENST00000493518 TRIP6Q15654 476 aaKnown RBP12.71□□□□□ -0.38
CACUL1-206ENST00000493518 TNXAQ16473 311 aa12.71□□□□□ -0.38
CACUL1-206ENST00000493518 UNQ5815/PRO19632Q6UWF5 114 aa12.71□□□□□ -0.38
CACUL1-206ENST00000493518 TMEM136Q6ZRR5 245 aa12.71□□□□□ -0.38
CACUL1-206ENST00000493518 TCTEX1D1Q8N7M0 179 aa12.71□□□□□ -0.38
CACUL1-206ENST00000493518 DNAJC4Q9NNZ3 241 aa12.71□□□□□ -0.38
CACUL1-206ENST00000493518 AMMECR1Q9Y4X0 333 aaPredicted RBP12.71□□□□□ -0.38
CACUL1-206ENST00000493518 CT45A6P0DMU7 189 aa12.7□□□□□ -0.38
CACUL1-206ENST00000493518 CT45A5P0DMU8 189 aa12.7□□□□□ -0.38
CACUL1-206ENST00000493518 CT45A7P0DMV0 189 aa12.7□□□□□ -0.38
CACUL1-206ENST00000493518 WFDC8Q8IUA0 241 aa12.7□□□□□ -0.38
CACUL1-206ENST00000493518 ZNF71Q9NQZ8 489 aaPredicted RBP12.7□□□□□ -0.38
CACUL1-206ENST00000493518 COL12A1Q99715 3063 aa12.7□□□□□ -0.38
CACUL1-206ENST00000493518 M0R2Z0 102 aa12.7□□□□□ -0.38
CACUL1-206ENST00000493518 RTL8BQ17RB0 113 aa12.7□□□□□ -0.38
CACUL1-206ENST00000493518 SLC35E1Q96K37 410 aa12.7□□□□□ -0.38
CACUL1-206ENST00000493518 TMEM167BQ9NRX6 74 aa12.7□□□□□ -0.38
CACUL1-206ENST00000493518 COMPP49747 757 aaPredicted RBP12.69□□□□□ -0.38
CACUL1-206ENST00000493518 PRR20EP86478 221 aa12.69□□□□□ -0.38
CACUL1-206ENST00000493518 PRR20CP86479 221 aa12.69□□□□□ -0.38
CACUL1-206ENST00000493518 PRR20DP86480 221 aa12.69□□□□□ -0.38
CACUL1-206ENST00000493518 PRR20BP86481 221 aa12.69□□□□□ -0.38
CACUL1-206ENST00000493518 PRR20AP86496 221 aa12.69□□□□□ -0.38
CACUL1-206ENST00000493518 OR10X1Q8NGY0 326 aa12.69□□□□□ -0.38
CACUL1-206ENST00000493518 OR5B3Q8NH48 314 aa12.69□□□□□ -0.38
CACUL1-206ENST00000493518 SAP30LQ9HAJ7 183 aa12.69□□□□□ -0.38
CACUL1-206ENST00000493518 TMEM14BQ9NUH8 114 aa12.69□□□□□ -0.38
CACUL1-206ENST00000493518 MRPL36Q9P0J6 103 aaKnown RBP12.69□□□□□ -0.38
CACUL1-206ENST00000493518 SLC25A17O43808 307 aa12.69□□□□□ -0.38
CACUL1-206ENST00000493518 SLC25A5P05141 298 aaKnown RBP12.69□□□□□ -0.38
CACUL1-206ENST00000493518 C8orf88P0DMB2 117 aa12.69□□□□□ -0.38
CACUL1-206ENST00000493518 TAS2R45P59539 299 aa12.69□□□□□ -0.38
CACUL1-206ENST00000493518 CX3CL1P78423 397 aa12.69□□□□□ -0.38
CACUL1-206ENST00000493518 TEX43Q6ZNM6 134 aa12.69□□□□□ -0.38
CACUL1-206ENST00000493518 TPSG1Q9NRR2 321 aa12.69□□□□□ -0.38
CACUL1-206ENST00000493518 ZNF835Q9Y2P0 537 aa12.69□□□□□ -0.38
CACUL1-206ENST00000493518 PRR33A8MZF0 331 aa12.68□□□□□ -0.38
CACUL1-206ENST00000493518 ZNF324O75467 553 aaPredicted RBP12.68□□□□□ -0.38
CACUL1-206ENST00000493518 SP9P0CG40 484 aa12.68□□□□□ -0.38
CACUL1-206ENST00000493518 AREGP15514 252 aa12.68□□□□□ -0.38
CACUL1-206ENST00000493518 ZNF474Q6S9Z5 364 aaPredicted RBP12.68□□□□□ -0.38
CACUL1-206ENST00000493518 TSKUQ8WUA8 353 aa12.68□□□□□ -0.38
CACUL1-206ENST00000493518 CLEC7AQ9BXN2 247 aa12.68□□□□□ -0.38
CACUL1-206ENST00000493518 RNF7Q9UBF6 113 aa12.68□□□□□ -0.38
CACUL1-206ENST00000493518 TRAV8-1A0A0A6YYK1 113 aa12.68□□□□□ -0.38
CACUL1-206ENST00000493518 J3QW42 95 aa12.68□□□□□ -0.38
CACUL1-206ENST00000493518 SNAI2O43623 268 aa12.68□□□□□ -0.38
CACUL1-206ENST00000493518 SELENOVP59797 346 aa12.68□□□□□ -0.38
CACUL1-206ENST00000493518 PAXXQ9BUH6 204 aa12.68□□□□□ -0.38
CACUL1-206ENST00000493518 S4R3C0 116 aa12.68□□□□□ -0.38
CACUL1-206ENST00000493518 ARL2-SNX15V9GYD0 113 aa12.68□□□□□ -0.38
CACUL1-206ENST00000493518 HIGD1CA8MV81 97 aa12.67□□□□□ -0.38
CACUL1-206ENST00000493518 UBE2G1P62253 170 aa12.67□□□□□ -0.38
CACUL1-206ENST00000493518 SELENOTP62341 195 aa12.67□□□□□ -0.38
CACUL1-206ENST00000493518 RUSC1-AS1Q66K80 236 aa12.67□□□□□ -0.38
CACUL1-206ENST00000493518 DDB2Q92466 427 aa12.67□□□□□ -0.38
CACUL1-206ENST00000493518 KCNS1Q96KK3 526 aa12.67□□□□□ -0.38
CACUL1-206ENST00000493518 LOC102724200A0A096LPH7 203 aaPredicted RBP12.67□□□□□ -0.38
CACUL1-206ENST00000493518 RPL19P84098 196 aaKnown RBP12.67□□□□□ -0.38
CACUL1-206ENST00000493518 FLYWCH2Q96CP2 140 aaKnown RBP12.67□□□□□ -0.38
CACUL1-206ENST00000493518 SLC25A33Q9BSK2 321 aa12.67□□□□□ -0.38
CACUL1-206ENST00000493518 PRNDQ9UKY0 176 aa12.67□□□□□ -0.38
CACUL1-206ENST00000493518 UPK2O00526 184 aa12.67□□□□□ -0.38
CACUL1-206ENST00000493518 AMY1AP04745 511 aa12.67□□□□□ -0.38
CACUL1-206ENST00000493518 PGLYRP4Q96LB8 373 aa12.67□□□□□ -0.38
CACUL1-206ENST00000493518 OR8B2Q96RD0 313 aa12.67□□□□□ -0.38
CACUL1-206ENST00000493518 RNF2Q99496 336 aa12.67□□□□□ -0.38
CACUL1-206ENST00000493518 RALYQ9UKM9 306 aaKnown RBP12.67□□□□□ -0.38
CACUL1-206ENST00000493518 RNF24Q9Y225 148 aa12.67□□□□□ -0.38
CACUL1-206ENST00000493518 PGPA6NDG6 321 aa12.66□□□□□ -0.38
CACUL1-206ENST00000493518 HYPMO75409 117 aa12.66□□□□□ -0.38
CACUL1-206ENST00000493518 ERHP84090 104 aaKnown RBP12.66□□□□□ -0.38
CACUL1-206ENST00000493518 C10orf113Q5VZT2 155 aa12.66□□□□□ -0.38
CACUL1-206ENST00000493518 Q71RC1 249 aaPredicted RBP12.66□□□□□ -0.38
CACUL1-206ENST00000493518 RITA1Q96K30 269 aa12.66□□□□□ -0.38
CACUL1-206ENST00000493518 GNB1LQ9BYB4 327 aa12.66□□□□□ -0.38
CACUL1-206ENST00000493518 DKK4Q9UBT3 224 aa12.66□□□□□ -0.38
CACUL1-206ENST00000493518 FOXA2Q9Y261 457 aaPredicted RBP12.66□□□□□ -0.38
CACUL1-206ENST00000493518 SLC25A15Q9Y619 301 aa12.66□□□□□ -0.38
CACUL1-206ENST00000493518 PTPRBP23467 1997 aa12.66□□□□□ -0.38
CACUL1-206ENST00000493518 IGF2RP11717 2491 aa12.66□□□□□ -0.38
CACUL1-206ENST00000493518 MUC21A0A0G2JKD1 596 aa12.66□□□□□ -0.38
CACUL1-206ENST00000493518 MUC21A0A140T8X8 626 aa12.66□□□□□ -0.38
CACUL1-206ENST00000493518 RNF151Q2KHN1 245 aa12.66□□□□□ -0.38
CACUL1-206ENST00000493518 MUC21Q5SSG8 566 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms