RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 XPNPEP1Q9NQW7 623 aa0.07□□□□□ -2.4
SYCP1-208ENST00000493377 FGFR1OP2Q9NVK5 253 aa0.07□□□□□ -2.4
SYCP1-208ENST00000493377 TAS2R4Q9NYW5 299 aa0.07□□□□□ -2.4
SYCP1-208ENST00000493377 TP73-AS1Q9UF72 201 aa0.07□□□□□ -2.4
SYCP1-208ENST00000493377 NAV2Q8IVL1 2488 aa0.07□□□□□ -2.4
SYCP1-208ENST00000493377 KCPQ6ZWJ8 1503 aa0.07□□□□□ -2.4
SYCP1-208ENST00000493377 OBSL1O75147 1896 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 TRBV6-8A0A0A6YYG3 113 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 EEF1E1-BLOC1S5C9J1V9 151 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 BUB1B-PAK6H3BSN5 160 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 DEXIO95424 95 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 HLA-DRB1P01911 266 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 HIST1H1TP22492 207 aaPredicted RBP0.06□□□□□ -2.4
SYCP1-208ENST00000493377 RPS12P25398 132 aaKnown RBP0.06□□□□□ -2.4
SYCP1-208ENST00000493377 SSR2P43308 183 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 HBA1P69905 142 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 KCNJ8Q15842 424 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 MPV17LQ2QL34 196 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 DPPA3Q6W0C5 159 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 C20orf196Q8IYI0 205 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 SIGLECL1Q8N7X8 197 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 C3orf56Q8N813 242 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 OR4E2Q8NGC2 313 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 H1FXQ92522 213 aaKnown RBP0.06□□□□□ -2.4
SYCP1-208ENST00000493377 PTH2Q96A98 100 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 ULBP3Q9BZM4 244 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 PRTFDC1Q9NRG1 225 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 NHP2Q9NX24 153 aaKnown RBP0.06□□□□□ -2.4
SYCP1-208ENST00000493377 FBXL12Q9NXK8 326 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 RASL12Q9NYN1 266 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 LSM5Q9Y4Y9 91 aaKnown RBP0.06□□□□□ -2.4
SYCP1-208ENST00000493377 TNCP24821 2201 aa0.06□□□□□ -2.4
SYCP1-208ENST00000493377 SNAPC4Q5SXM2 1469 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 TRAV1-1A0A0B4J248 108 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 DPRXA6NFQ7 191 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 ZNF736B4DX44 427 aaPredicted RBP0.05□□□□□ -2.4
SYCP1-208ENST00000493377 OR2J2O76002 312 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 AP2S1P53680 142 aaPredicted RBP0.05□□□□□ -2.4
SYCP1-208ENST00000493377 MAGOHP61326 146 aaKnown RBP0.05□□□□□ -2.4
SYCP1-208ENST00000493377 SNRPD2P62316 118 aaKnown RBP0.05□□□□□ -2.4
SYCP1-208ENST00000493377 OR2F1Q13607 317 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 LPCAT3Q6P1A2 487 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 OOSP2Q86WS3 158 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 HIST3H2BBQ8N257 126 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 OR5A1Q8NGJ0 315 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 IMP4Q96G21 291 aaKnown RBP0.05□□□□□ -2.4
SYCP1-208ENST00000493377 TSPAN32Q96QS1 320 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 DCSTAMPQ9H295 470 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 RNF122Q9H9V4 155 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 ACER3Q9NUN7 267 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 ERGIC3Q9Y282 383 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 TMEM56-RWDD3S4R434 201 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 APCP25054 2843 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 EVC2Q86UK5 1308 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 MUC4Q99102 2169 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 MTUS2Q5JR59 1369 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 UNC13CQ8NB66 2214 aa0.05□□□□□ -2.4
SYCP1-208ENST00000493377 ARHGEF28Q8N1W1 1705 aaKnown RBP0.04□□□□□ -2.4
SYCP1-208ENST00000493377 NAV3Q8IVL0 2385 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 TET1Q8NFU7 2136 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 SIP14410 1827 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 LINC00854A0A1B0GVQ3 168 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 EXOC1LA0A1B0GW35 172 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 PROSCO94903 275 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 SMIM10L2AP0DMW4 78 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 SMIM10L2BP0DMW5 78 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 HIST1H1EP10412 219 aaKnown RBP0.04□□□□□ -2.4
SYCP1-208ENST00000493377 CDC42P60953 191 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 PSME3P61289 254 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 ACOT6Q3I5F7 207 aaPredicted RBP0.04□□□□□ -2.4
SYCP1-208ENST00000493377 KHDC3LQ587J8 217 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 LPCAT4Q643R3 524 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 LCA10Q71F78 164 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 CLVS1Q8IUQ0 354 aaPredicted RBP0.04□□□□□ -2.4
SYCP1-208ENST00000493377 C12orf45Q8N5I9 185 aaPredicted RBP0.04□□□□□ -2.4
SYCP1-208ENST00000493377 OR13D1Q8NGV5 346 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 KLK6Q92876 244 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 CFAP53Q96M91 514 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 GINS4Q9BRT9 223 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 TMEM147Q9BVK8 224 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 COMMD5Q9GZQ3 224 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 C11orf68Q9H3H3 251 aaKnown RBP0.04□□□□□ -2.4
SYCP1-208ENST00000493377 SLC39A9Q9NUM3 307 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 MRPL27Q9P0M9 148 aaKnown RBP0.04□□□□□ -2.4
SYCP1-208ENST00000493377 EPDR1Q9UM22 224 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 ATP6V1DQ9Y5K8 247 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 SCN8AQ9UQD0 1980 aa0.04□□□□□ -2.4
SYCP1-208ENST00000493377 WRNQ14191 1432 aaPredicted RBP eCLIP0.04□□□□□ -2.4
SYCP1-208ENST00000493377 MED1Q15648 1581 aaPredicted RBP0.03□□□□□ -2.4
SYCP1-208ENST00000493377 TRAV9-1A0A075B6T8 112 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 PQLC2LA1A4F0 135 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 C7orf71A4D174 169 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 PSMD12O00232 456 aaPredicted RBP0.03□□□□□ -2.4
SYCP1-208ENST00000493377 FAAHO00519 579 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 NCR3O14931 201 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 TGOLN2O43493 480 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 SULT1B1O43704 296 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 FREM3P0C091 2139 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 KRTAP2-3P0C7H8 128 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 CD79AP11912 226 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms