RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 TMEM116Q8NCL8 245 aa11.17□□□□□ -0.62
PTPN7-216ENST00000492977 OR1L6Q8NGR2 347 aa11.17□□□□□ -0.62
PTPN7-216ENST00000492977 C22orf15Q8WYQ4 148 aa11.17□□□□□ -0.62
PTPN7-216ENST00000492977 PERPQ96FX8 193 aa11.17□□□□□ -0.62
PTPN7-216ENST00000492977 TXNDC17Q9BRA2 123 aa11.17□□□□□ -0.62
PTPN7-216ENST00000492977 SEPSECSQ9HD40 501 aaKnown RBP11.17□□□□□ -0.62
PTPN7-216ENST00000492977 C1RLQ9NZP8 487 aa11.17□□□□□ -0.62
PTPN7-216ENST00000492977 MED13LQ71F56 2210 aa11.17□□□□□ -0.62
PTPN7-216ENST00000492977 NAV3Q8IVL0 2385 aa11.17□□□□□ -0.62
PTPN7-216ENST00000492977 CENPVL3A0A0U1RRI6 287 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 TCRBV4S1A1TA0A5B7 111 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 TMEM11P17152 192 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 AKIRIN2Q53H80 203 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 FAM78BQ5VT40 261 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 GATAD1Q8WUU5 269 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 TVP23CQ96ET8 276 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 RNF2Q99496 336 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 SLC25A33Q9BSK2 321 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 FUT9Q9Y231 359 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 ZNF462Q96JM2 2506 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 ZFYVE26Q68DK2 2539 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 IGKV1D-37A0A075B6S9 117 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 NCBP2LA6PVI3 153 aaKnown RBP11.16□□□□□ -0.62
PTPN7-216ENST00000492977 OR5G3P0C626 314 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 APELAP0DMC3 54 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 CTRB1P17538 263 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 RND2P52198 227 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 CTRB2Q6GPI1 263 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 TRGV9Q99603 122 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 C20orf24Q9BUV8 137 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 WNT10AQ9GZT5 417 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 TUBA4BQ9H853 241 aa11.16□□□□□ -0.62
PTPN7-216ENST00000492977 C11orf94C9JXX5 98 aa11.15□□□□□ -0.62
PTPN7-216ENST00000492977 PDE6DO43924 150 aa11.15□□□□□ -0.62
PTPN7-216ENST00000492977 CLN5O75503 358 aa11.15□□□□□ -0.62
PTPN7-216ENST00000492977 GATA2P23769 480 aaPredicted RBP11.15□□□□□ -0.62
PTPN7-216ENST00000492977 GCHFRP30047 84 aa11.15□□□□□ -0.62
PTPN7-216ENST00000492977 TAS2R45P59539 299 aa11.15□□□□□ -0.62
PTPN7-216ENST00000492977 PNRC1Q12796 327 aaPredicted RBP11.15□□□□□ -0.62
PTPN7-216ENST00000492977 FBLN7Q53RD9 439 aa11.15□□□□□ -0.62
PTPN7-216ENST00000492977 SPATA31B1PQ5VZV4 182 aa11.15□□□□□ -0.62
PTPN7-216ENST00000492977 OR4F5Q8NH21 305 aa11.15□□□□□ -0.62
PTPN7-216ENST00000492977 OR4F4Q96R69 305 aa11.15□□□□□ -0.62
PTPN7-216ENST00000492977 MRPL32Q9BYC8 188 aaKnown RBP11.15□□□□□ -0.62
PTPN7-216ENST00000492977 DNAJC4Q9NNZ3 241 aa11.15□□□□□ -0.62
PTPN7-216ENST00000492977 TECRQ9NZ01 308 aaKnown RBP11.15□□□□□ -0.62
PTPN7-216ENST00000492977 MRPL36Q9P0J6 103 aaKnown RBP11.15□□□□□ -0.62
PTPN7-216ENST00000492977 FLNCQ14315 2725 aa11.14□□□□□ -0.63
PTPN7-216ENST00000492977 A1L4Q6 167 aa11.14□□□□□ -0.63
PTPN7-216ENST00000492977 PSMB11A5LHX3 300 aa11.14□□□□□ -0.63
PTPN7-216ENST00000492977 B4DEV8 164 aa11.14□□□□□ -0.63
PTPN7-216ENST00000492977 IGHV3-48P01763 117 aa11.14□□□□□ -0.63
PTPN7-216ENST00000492977 SLC25A16P16260 332 aa11.14□□□□□ -0.63
PTPN7-216ENST00000492977 SMCPP49901 116 aaPredicted RBP11.14□□□□□ -0.63
PTPN7-216ENST00000492977 CX3CL1P78423 397 aa11.14□□□□□ -0.63
PTPN7-216ENST00000492977 PQLC2Q6ZP29 291 aa11.14□□□□□ -0.63
PTPN7-216ENST00000492977 MIR17HGQ75NE6 70 aa11.14□□□□□ -0.63
PTPN7-216ENST00000492977 OR1L4Q8NGR5 311 aa11.14□□□□□ -0.63
PTPN7-216ENST00000492977 PFDN5Q99471 154 aa11.14□□□□□ -0.63
PTPN7-216ENST00000492977 TNFRSF19Q9NS68 423 aa11.14□□□□□ -0.63
PTPN7-216ENST00000492977 DMRT1Q9Y5R6 373 aa11.14□□□□□ -0.63
PTPN7-216ENST00000492977 MYO18BQ8IUG5 2567 aa11.13□□□□□ -0.63
PTPN7-216ENST00000492977 A0A087WWC5 75 aa11.13□□□□□ -0.63
PTPN7-216ENST00000492977 IGHV1-69DA0A0B4J2H0 117 aa11.13□□□□□ -0.63
PTPN7-216ENST00000492977 ZNF727A8MUV8 499 aa11.13□□□□□ -0.63
PTPN7-216ENST00000492977 F6UZH7 168 aa11.13□□□□□ -0.63
PTPN7-216ENST00000492977 I3L2K1 104 aa11.13□□□□□ -0.63
PTPN7-216ENST00000492977 IGHV1-69P01742 117 aa11.13□□□□□ -0.63
PTPN7-216ENST00000492977 MSMBP08118 114 aa11.13□□□□□ -0.63
PTPN7-216ENST00000492977 AKR1C3P42330 323 aa11.13□□□□□ -0.63
PTPN7-216ENST00000492977 C19orf35Q6ZS72 473 aa11.13□□□□□ -0.63
PTPN7-216ENST00000492977 TMEM37Q8WXS4 190 aa11.13□□□□□ -0.63
PTPN7-216ENST00000492977 NRGNQ92686 78 aa11.13□□□□□ -0.63
PTPN7-216ENST00000492977 ARPC1AQ92747 370 aa11.13□□□□□ -0.63
PTPN7-216ENST00000492977 SDF2L1Q9HCN8 221 aa11.13□□□□□ -0.63
PTPN7-216ENST00000492977 ARL2-SNX15V9GYD0 113 aa11.13□□□□□ -0.63
PTPN7-216ENST00000492977 NPIPB5A8MRT5 1133 aa11.12□□□□□ -0.63
PTPN7-216ENST00000492977 C8orf88P0DMB2 117 aa11.12□□□□□ -0.63
PTPN7-216ENST00000492977 BPIFB3P59826 476 aa11.12□□□□□ -0.63
PTPN7-216ENST00000492977 ZNF90Q03938 601 aa11.12□□□□□ -0.63
PTPN7-216ENST00000492977 FAM120AOSQ5T036 256 aa11.12□□□□□ -0.63
PTPN7-216ENST00000492977 CST9LP1Q5W188 147 aa11.12□□□□□ -0.63
PTPN7-216ENST00000492977 C15orf54Q8N8G6 183 aa11.12□□□□□ -0.63
PTPN7-216ENST00000492977 Q8N9W7 124 aa11.12□□□□□ -0.63
PTPN7-216ENST00000492977 OR4X1Q8NH49 305 aa11.12□□□□□ -0.63
PTPN7-216ENST00000492977 SMIM7Q9BQ49 75 aa11.12□□□□□ -0.63
PTPN7-216ENST00000492977 TMEM167BQ9NRX6 74 aa11.12□□□□□ -0.63
PTPN7-216ENST00000492977 NAT8Q9UHE5 227 aa11.12□□□□□ -0.63
PTPN7-216ENST00000492977 ELOA3CA0A087WX78 387 aaPredicted RBP11.11□□□□□ -0.63
PTPN7-216ENST00000492977 B4DSR2 109 aa11.11□□□□□ -0.63
PTPN7-216ENST00000492977 COX7A2P2O60397 106 aa11.11□□□□□ -0.63
PTPN7-216ENST00000492977 HLA-DRB1P01911 266 aa11.11□□□□□ -0.63
PTPN7-216ENST00000492977 UBE2G2P60604 165 aa11.11□□□□□ -0.63
PTPN7-216ENST00000492977 TNP2Q05952 138 aa11.11□□□□□ -0.63
PTPN7-216ENST00000492977 TMEM241Q24JQ0 296 aa11.11□□□□□ -0.63
PTPN7-216ENST00000492977 CLEC12BQ2HXU8 276 aa11.11□□□□□ -0.63
PTPN7-216ENST00000492977 C10orf113Q5VZT2 155 aa11.11□□□□□ -0.63
PTPN7-216ENST00000492977 TTC9CQ8N5M4 171 aa11.11□□□□□ -0.63
PTPN7-216ENST00000492977 RASL11BQ9BPW5 248 aa11.11□□□□□ -0.63
PTPN7-216ENST00000492977 COLCA2A8K830 154 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms