RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 TBL1YQ9BQ87 522 aa3.26□□□□□ -1.89
BRCA1-220ENST00000492859 ZNF747Q9BV97 191 aa3.26□□□□□ -1.89
BRCA1-220ENST00000492859 EIF5A2Q9GZV4 153 aaKnown RBP3.26□□□□□ -1.89
BRCA1-220ENST00000492859 ST20Q9HBF5 79 aa3.26□□□□□ -1.89
BRCA1-220ENST00000492859 PLAC1Q9HBJ0 212 aa3.26□□□□□ -1.89
BRCA1-220ENST00000492859 SPRR3Q9UBC9 169 aa3.26□□□□□ -1.89
BRCA1-220ENST00000492859 CTSZQ9UBR2 303 aa3.26□□□□□ -1.89
BRCA1-220ENST00000492859 FIS1Q9Y3D6 152 aa3.26□□□□□ -1.89
BRCA1-220ENST00000492859 SUPT6HQ7KZ85 1726 aaKnown RBP3.26□□□□□ -1.89
BRCA1-220ENST00000492859 DIP2CQ9Y2E4 1556 aa3.26□□□□□ -1.89
BRCA1-220ENST00000492859 TRAV12-2A0A075B6T6 113 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 SMIM26A0A096LP01 95 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 TRBV5-3A0A0A0MS03 114 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 IGHV1-58A0A0C4DH39 117 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 A0A0J9YXV3 536 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 GRIFINA4D1Z8 144 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 HMSDA8MTL9 139 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 MCRIP1C9JLW8 97 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 C9JQL5 133 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 PMS2P2O95744 297 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 EGR2P11161 476 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-220ENST00000492859 FABP2P12104 132 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 HLA-DOBP13765 273 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 NFYAP23511 347 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-220ENST00000492859 PSMB3P49720 205 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 POLR2JP52435 117 aaKnown RBP3.25□□□□□ -1.89
BRCA1-220ENST00000492859 ADIRFQ15847 76 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 C6orf99Q4VX62 202 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 HES3Q5TGS1 186 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 GFRALQ6UXV0 394 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 Q6ZPA2 131 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 Q6ZS92 163 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 MRGPREQ86SM8 312 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 LINC00596Q86U02 117 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 C1orf174Q8IYL3 243 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 RAB42Q8N4Z0 105 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 RNF182Q8N6D2 247 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 C3orf56Q8N813 242 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 OR11H7Q8NGC8 314 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 VSTM2AQ8TAG5 236 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 TMEM158Q8WZ71 300 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 LSM10Q969L4 123 aaKnown RBP3.25□□□□□ -1.89
BRCA1-220ENST00000492859 MUCL1Q96DR8 90 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 CNRIP1Q96F85 164 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-220ENST00000492859 S100A16Q96FQ6 103 aaKnown RBP3.25□□□□□ -1.89
BRCA1-220ENST00000492859 AQP10Q96PS8 301 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 C20orf78Q9BR46 151 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 BCL2L10Q9HD36 194 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 XCL2Q9UBD3 114 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 OR5V1Q9UGF6 321 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 ZNF222Q9UK12 451 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 SELENOKQ9Y6D0 94 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 THSD7AQ9UPZ6 1657 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 POLR2AP24928 1970 aaKnown RBP3.25□□□□□ -1.89
BRCA1-220ENST00000492859 SCN8AQ9UQD0 1980 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 TIAM1Q13009 1591 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 ANAPC1Q9H1A4 1944 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 MARF1Q9Y4F3 1742 aaKnown RBP3.25□□□□□ -1.89
BRCA1-220ENST00000492859 FER1L5A0AVI2 2057 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 CFAP43Q8NDM7 1665 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 IGLV9-49A0A0B4J1Y8 123 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 DPRXA6NFQ7 191 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 LINC00473A8K010 186 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 FAM220BPB1ANY3 271 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 H3BRM9 83 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 APOC4-APOC2K7ER74 178 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 M0R378 163 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 ATP6V0E1O15342 81 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 ZNF73O43830 326 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-220ENST00000492859 PITX3O75364 302 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 FSTL3O95633 263 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 APOC2P02655 101 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 ZNF286BP0CG31 522 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 INAFM2P0DMQ5 153 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 MFAP2P55001 183 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 LINC00313P59037 77 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 GABARAPL2P60520 117 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 SEC11AP67812 179 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 BVES-AS1Q5T3Y7 98 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 PCSK4Q6UW60 755 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 NOTCH2NLQ7Z3S9 236 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 MRPL30Q8TCC3 161 aaKnown RBP3.25□□□□□ -1.89
BRCA1-220ENST00000492859 FAM3DQ96BQ1 224 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 TMEM204Q9BSN7 226 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 SHANK2-AS3Q9BTD1 123 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 SRXN1Q9BYN0 137 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 PARLQ9H300 379 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 TP73-AS1Q9UF72 201 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 ABCA5Q8WWZ7 1642 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 EML6Q6ZMW3 1958 aa3.25□□□□□ -1.89
BRCA1-220ENST00000492859 ANKARQ7Z5J8 1434 aa3.24□□□□□ -1.89
BRCA1-220ENST00000492859 RGPD3A6NKT7 1758 aaPredicted RBP3.24□□□□□ -1.89
BRCA1-220ENST00000492859 GLI2P10070 1586 aa3.24□□□□□ -1.89
BRCA1-220ENST00000492859 NWD2Q9ULI1 1742 aa3.24□□□□□ -1.89
BRCA1-220ENST00000492859 EFCAB5A4FU69 1503 aa3.24□□□□□ -1.89
BRCA1-220ENST00000492859 DOCK2Q92608 1830 aa3.24□□□□□ -1.89
BRCA1-220ENST00000492859 CFTRP13569 1480 aa3.24□□□□□ -1.89
BRCA1-220ENST00000492859 A0A087WWC5 75 aa3.24□□□□□ -1.89
BRCA1-220ENST00000492859 IGKV1-8A0A0C4DH67 115 aa3.24□□□□□ -1.89
BRCA1-220ENST00000492859 IRGMA1A4Y4 181 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms