RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 CENPSQ8N2Z9 138 aa5.4□□□□□ -1.54
PDLIM1-204ENST00000492511 OR10C1Q96KK4 312 aa5.4□□□□□ -1.54
PDLIM1-204ENST00000492511 C7orf50Q9BRJ6 194 aaKnown RBP5.4□□□□□ -1.54
PDLIM1-204ENST00000492511 RBKSQ9H477 322 aa5.4□□□□□ -1.54
PDLIM1-204ENST00000492511 HEYLQ9NQ87 328 aaPredicted RBP5.4□□□□□ -1.54
PDLIM1-204ENST00000492511 MRPL27Q9P0M9 148 aaKnown RBP5.4□□□□□ -1.54
PDLIM1-204ENST00000492511 UFC1Q9Y3C8 167 aa5.4□□□□□ -1.54
PDLIM1-204ENST00000492511 DUXBA0A1W2PPF3 345 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 C15orf62A8K5M9 175 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 MPTX1A8MV57 137 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 NUPL2O15504 423 aaKnown RBP5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 ZNF207O43670 478 aaKnown RBP5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 HOXB5P09067 269 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 OR4E1P0C645 316 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 SLC25A6P12236 298 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 VAMP1P23763 118 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 INPP1P49441 399 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 SUB1P53999 127 aaKnown RBP eCLIP5.39□□□□□ -1.552e-7■□□□□ 10.4
PDLIM1-204ENST00000492511 UBE2MP61081 183 aaKnown RBP5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 SRPXP78539 464 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 GGNBP1Q5YKI7 109 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 LINC00322Q6ZN03 302 aaPredicted RBP5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 DUSP18Q8NEJ0 188 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 OR4X1Q8NH49 305 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 DYNLRB2Q8TF09 96 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 MARC2Q969Z3 335 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 C20orf24Q9BUV8 137 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 ZFAND3Q9H8U3 227 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 PALMDQ9NP74 551 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 ENY2Q9NPA8 101 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 DAZ1Q9NQZ3 744 aaKnown RBP5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 GAR1Q9NY12 217 aaKnown RBP5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 TMED3Q9Y3Q3 217 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 RYR3Q15413 4870 aa5.39□□□□□ -1.55
PDLIM1-204ENST00000492511 RBMY1BA6NDE4 496 aaKnown RBP5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 RBMY1EA6NEQ0 496 aaKnown RBP5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 CENPXA8MT69 81 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 CORTO00230 105 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 CHEK1O14757 476 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 LYRM1O43325 122 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 GNG7O60262 68 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 CLN5O75503 358 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 ADAP1O75689 374 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 SCAF4O95104 1147 aaKnown RBP5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 IGKV1-17P01599 117 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 APOHP02749 345 aaPredicted RBP5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 RBMY1DP0C7P1 496 aaKnown RBP5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 NHLRC4P0CG21 123 aaPredicted RBP5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 OPRK1P41145 380 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 NPBWR1P48145 328 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 CD81P60033 236 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 IFITM3Q01628 133 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 RELQ04864 619 aaPredicted RBP5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 DHRS2Q13268 280 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 GUCA2BQ16661 112 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 PRSS54Q6PEW0 395 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 TOMM20LQ6UXN7 152 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 LYG2Q86SG7 212 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 LILRB2Q8N423 598 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 DEFB125Q8N687 156 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 SLC24A4Q8NFF2 622 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 OR1S1Q8NH92 325 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 RNASEH2CQ8TDP1 164 aaKnown RBP5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 DTD1Q8TEA8 209 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 NEURL2Q9BR09 285 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 CCDC32Q9BV29 185 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 WFDC10AQ9H1F0 79 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 HIPK2Q9H2X6 1198 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 CACFD1Q9UGQ2 172 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 SMPXQ9UHP9 88 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 TBC1D24Q9ULP9 559 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 U3KQ87 197 aa5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 PLECQ15149 4684 aaKnown RBP5.38□□□□□ -1.55
PDLIM1-204ENST00000492511 IGHV3OR16-13A0A075B7E8 117 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 IGHV3-49A0A0A0MS15 119 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 TRAV14DV4A0A0A6YYC5 116 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 IGHV3-74A0A0B4J1X5 117 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 TRAV25A0A0B4J276 109 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 IGHV7-4-1A0A0J9YVY3 117 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 YIF1AO95070 293 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 TCRBP04435 133 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 IGLC1P0CG04 106 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 IAPPP10997 89 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 NPY1RP25929 384 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 TIGITQ495A1 244 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 FAM90A2PQ658T7 463 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 ZNF600Q6ZNG1 722 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 GTSCR1Q86UQ5 136 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 TMEM116Q8NCL8 245 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 OR52B4Q8NGK2 314 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 S100ZQ8WXG8 99 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 NPIPB3Q92617 1050 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 CITED4Q96RK1 184 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 RNF2Q99496 336 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 TM2D3Q9BRN9 247 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 RHPN1-AS1Q9BWJ2 59 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 C20orf85Q9H1P6 137 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 PTTG2Q9NZH5 202 aa5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 PUS1Q9Y606 427 aaKnown RBP eCLIP5.37□□□□□ -1.55
PDLIM1-204ENST00000492511 STARD9Q9P2P6 4700 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms