RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 KRT222Q8N1A0 295 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 OR5A1Q8NGJ0 315 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 OR51A2Q8NGJ7 313 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 DNAJC9Q8WXX5 260 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 SIGMAR1Q99720 223 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 CYSLTR1Q9Y271 337 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 ERGIC3Q9Y282 383 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 MED12LQ86YW9 2145 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 NEO1Q92859 1461 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 TMEM212A6NML5 194 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 C19orf84I3L1E1 186 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 MRPS14O60783 128 aaKnown RBP0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 ATP5HO75947 161 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 C8GP07360 202 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 PPIBP23284 216 aaKnown RBP0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 HSD11B1P28845 292 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 CAPZBP47756 277 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 MRPS15P82914 257 aaKnown RBP0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 LINC01554Q52M75 96 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 Q6Q795 121 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 UNQ6190/PRO20217Q6UXQ8 127 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 Q6ZSA8 131 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 ZNF826PQ6ZT77 177 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 RPS19BP1Q86WX3 136 aaKnown RBP0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 HIST3H2BBQ8N257 126 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 C15orf53Q8NAA6 179 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 DGCR14Q96DF8 476 aaKnown RBP0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 CHMP6Q96FZ7 201 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 C2orf50Q96LR7 162 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 GINS4Q9BRT9 223 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 NMNAT1Q9HAN9 279 aaPredicted RBP0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 PIK3C2GO75747 1445 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 NCOA1Q15788 1441 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 SETD5Q9C0A6 1442 aa0.88□□□□□ -2.27
HMGB1P30-201ENST00000492455 ARFGEF3Q5TH69 2177 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 PCDH15Q96QU1 1955 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 DOCK5Q9H7D0 1870 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 IGKV1D-42A0A075B6H8 117 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 IGKV2-29A2NJV5 120 aaPredicted RBP0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 TCL1BO95988 128 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 CST2P09228 141 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 SMIM17P0DL12 118 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 COX6A1P12074 109 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 SPI1P17947 270 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 FKBP2P26885 142 aaKnown RBP0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 MRPS25P82663 173 aaKnown RBP0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 RHEBQ15382 184 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 TEX36Q5VZQ5 186 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 LCA10Q71F78 164 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 Q8N2B8 174 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 SIGLECL1Q8N7X8 197 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 OR4E2Q8NGC2 313 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 OR4D11Q8NGI4 311 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 SLC25A40Q8TBP6 338 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 BTF3L4Q96K17 158 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 ADAT1Q9BUB4 502 aaKnown RBP0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 KIFC1Q9BW19 673 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 MIXL1Q9H2W2 232 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 RNF122Q9H9V4 155 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 PARVBQ9HBI1 364 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 OSTCQ9NRP0 149 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 TVP23BQ9NYZ1 205 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 TOPBP1Q92547 1522 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 LAMB2P55268 1798 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 ALPK2Q86TB3 2170 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 MYH11P35749 1972 aa0.87□□□□□ -2.27
HMGB1P30-201ENST00000492455 DOCK3Q8IZD9 2030 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 HEATR5BQ9P2D3 2071 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 FAM159BA6NKW6 160 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 OR5F1O95221 314 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 CYBAP13498 195 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 S100A4P26447 101 aaKnown RBP0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 CASP1P29466 404 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 YPEL3P61236 119 aaPredicted RBP0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 CDK5R1Q15078 307 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 LIN52Q52LA3 116 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 KHDC3LQ587J8 217 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 C10orf55Q5SWW7 151 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 TRAPPC6BQ86SZ2 158 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 LINC00471Q8N535 108 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 OR11H6Q8NGC7 330 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 MED9Q9NWA0 146 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 ARL2BPQ9Y2Y0 163 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 ADGRL3Q9HAR2 1447 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 GLI3P10071 1580 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 MICAL3Q7RTP6 2002 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 HECW1Q76N89 1606 aa0.86□□□□□ -2.27
HMGB1P30-201ENST00000492455 KIF13BQ9NQT8 1826 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 IGKV3D-7A0A0C4DH55 119 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 IGKV3OR2-268A0A0C4DH90 116 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 FUOMA2VDF0 154 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 OR2T1O43869 369 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 OR2B3O76000 313 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 SERPINA1P01009 418 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 OR4E1P0C645 316 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 ASAH2BP0C7U1 165 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 LYNX1P0DP58 116 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 RNASE3P12724 160 aaKnown RBP0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 MIFP14174 115 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 SRIP30626 198 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms