RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 IGLV1-40P01703 118 aa7.58□□□□□ -1.2
USP54-214ENST00000492357 IGHG4P01861 327 aa7.58□□□□□ -1.2
USP54-214ENST00000492357 ELANEP08246 267 aa7.58□□□□□ -1.2
USP54-214ENST00000492357 RPL29P47914 159 aaKnown RBP7.58□□□□□ -1.2
USP54-214ENST00000492357 CFHR3Q02985 330 aa7.58□□□□□ -1.2
USP54-214ENST00000492357 CLINT1Q14677 625 aa7.58□□□□□ -1.2
USP54-214ENST00000492357 S100A7AQ86SG5 101 aa7.58□□□□□ -1.2
USP54-214ENST00000492357 RNF152Q8N8N0 203 aa7.58□□□□□ -1.2
USP54-214ENST00000492357 ZNF680Q8NEM1 530 aa7.58□□□□□ -1.2
USP54-214ENST00000492357 OR2T6Q8NHC8 308 aa7.58□□□□□ -1.2
USP54-214ENST00000492357 FANCD2OSQ96PS1 177 aa7.58□□□□□ -1.2
USP54-214ENST00000492357 SLC25A32Q9H2D1 315 aa7.58□□□□□ -1.2
USP54-214ENST00000492357 ZNF702PQ9H963 129 aa7.58□□□□□ -1.2
USP54-214ENST00000492357 UBQLN2Q9UHD9 624 aa7.58□□□□□ -1.2
USP54-214ENST00000492357 TRBV7-1A0A0A6YYK4 115 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 A0A1B0GUS0 222 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 J3QL48 77 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 K7EIM0 57 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 TCF21O43680 179 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 MT-CO2P00403 227 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 CRYBA1P05813 215 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 S100A7P31151 101 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 MFAP2P55001 183 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 MFAP4P55083 255 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 BLCAPP62952 87 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 AKR1C1Q04828 323 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 GAMTQ14353 236 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 ECSCRQ19T08 205 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 ARSJQ5FYB0 599 aaPredicted RBP7.57□□□□□ -1.2
USP54-214ENST00000492357 C9orf152Q5JTZ5 239 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 SPSB3Q6PJ21 355 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 BTNL8Q6UX41 500 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 IL17RELQ6ZVW7 336 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 RNF141Q8WVD5 230 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 SAT2Q96F10 170 aaPredicted RBP7.57□□□□□ -1.2
USP54-214ENST00000492357 TRGV9Q99603 122 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 FAM103A1Q9BTL3 118 aaKnown RBP7.57□□□□□ -1.2
USP54-214ENST00000492357 NPCDR1Q9BY65 106 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 SMIM3Q9BZL3 60 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 WFDC1Q9HC57 220 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 RNF24Q9Y225 148 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 VPS13CQ709C8 3753 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 PLXNB1O43157 2135 aa7.57□□□□□ -1.2
USP54-214ENST00000492357 UBE2L5PA0A1B0GUS4 154 aa7.56□□□□□ -1.2
USP54-214ENST00000492357 CLN5O75503 358 aa7.56□□□□□ -1.2
USP54-214ENST00000492357 FGF7P21781 194 aa7.56□□□□□ -1.2
USP54-214ENST00000492357 ATP6V0CP27449 155 aa7.56□□□□□ -1.2
USP54-214ENST00000492357 CAMLGP49069 296 aa7.56□□□□□ -1.2
USP54-214ENST00000492357 SULT1A2P50226 295 aa7.56□□□□□ -1.2
USP54-214ENST00000492357 RAB14P61106 215 aa7.56□□□□□ -1.2
USP54-214ENST00000492357 YPEL3P61236 119 aaPredicted RBP7.56□□□□□ -1.2
USP54-214ENST00000492357 FOXE3Q13461 319 aa7.56□□□□□ -1.2
USP54-214ENST00000492357 TEX38Q6PEX7 206 aa7.56□□□□□ -1.2
USP54-214ENST00000492357 RBMXL1Q96E39 390 aaKnown RBP7.56□□□□□ -1.2
USP54-214ENST00000492357 MISP3Q96FF7 219 aa7.56□□□□□ -1.2
USP54-214ENST00000492357 BSCL2Q96G97 398 aaPredicted RBP7.56□□□□□ -1.2
USP54-214ENST00000492357 RNF2Q99496 336 aa7.56□□□□□ -1.2
USP54-214ENST00000492357 FNDC4Q9H6D8 234 aaPredicted RBP7.56□□□□□ -1.2
USP54-214ENST00000492357 C21orf62Q9NYP8 219 aa7.56□□□□□ -1.2
USP54-214ENST00000492357 DMRT1Q9Y5R6 373 aa7.56□□□□□ -1.2
USP54-214ENST00000492357 AKAP9Q99996 3911 aa7.56□□□□□ -1.2
USP54-214ENST00000492357 MXRA5Q9NR99 2828 aa7.56□□□□□ -1.2
USP54-214ENST00000492357 TCRBV4S1A1TA0A5B7 111 aa7.55□□□□□ -1.2
USP54-214ENST00000492357 INAFM1C9JVW0 142 aa7.55□□□□□ -1.2
USP54-214ENST00000492357 REG1AP05451 166 aa7.55□□□□□ -1.2
USP54-214ENST00000492357 PSMB8P28062 276 aa7.55□□□□□ -1.2
USP54-214ENST00000492357 PLP1P60201 277 aa7.55□□□□□ -1.2
USP54-214ENST00000492357 BLOC1S1P78537 153 aa7.55□□□□□ -1.2
USP54-214ENST00000492357 RHOGP84095 191 aa7.55□□□□□ -1.2
USP54-214ENST00000492357 HSD17B11Q8NBQ5 300 aa7.55□□□□□ -1.2
USP54-214ENST00000492357 MYOZ3Q8TDC0 251 aa7.55□□□□□ -1.2
USP54-214ENST00000492357 EEF1AKMT3Q96AZ1 226 aa7.55□□□□□ -1.2
USP54-214ENST00000492357 SMR3AQ99954 134 aa7.55□□□□□ -1.2
USP54-214ENST00000492357 FBXL7Q9UJT9 491 aa7.55□□□□□ -1.2
USP54-214ENST00000492357 SLC45A2Q9UMX9 530 aa7.55□□□□□ -1.2
USP54-214ENST00000492357 NSD1Q96L73 2696 aaPredicted RBP7.55□□□□□ -1.2
USP54-214ENST00000492357 CSMD1Q96PZ7 3565 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 HIVEP1P15822 2718 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 SMCO3A2RU48 225 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 PSMB11A5LHX3 300 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 FAM181BA6NEQ2 426 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 NUDT19A8MXV4 375 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 G3V318 75 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 TEX46H3BTG2 121 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 AGPAT2O15120 278 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 TSPAN15O95858 294 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 IGLC1P0CG04 106 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 RND2P52198 227 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 ATP5G2Q06055 141 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 ACOT6Q3I5F7 207 aaPredicted RBP7.54□□□□□ -1.2
USP54-214ENST00000492357 CLLU1Q5K131 121 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 AKR1C8PQ5T2L2 129 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 ACSM6Q6P461 480 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 Q6ZRG5 221 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 Q6ZSV7 163 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 BPIFCQ8NFQ6 507 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 OR5T1Q8NG75 326 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 ZNF502Q8TBZ5 544 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 GATAD1Q8WUU5 269 aa7.54□□□□□ -1.2
USP54-214ENST00000492357 TMEM190Q8WZ59 177 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms