RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 OR4X1Q8NH49 305 aa12.16□□□□□ -0.46
TRA2A-208ENST00000490942 PINX1Q96BK5 328 aaKnown RBP12.16□□□□□ -0.46
TRA2A-208ENST00000490942 DUX3Q96PT4 197 aa12.16□□□□□ -0.46
TRA2A-208ENST00000490942 STRAPQ9Y3F4 350 aaKnown RBP12.16□□□□□ -0.46
TRA2A-208ENST00000490942 TRAV30A0A087WSZ9 112 aa12.15□□□□□ -0.46
TRA2A-208ENST00000490942 K7EPK0 472 aa12.15□□□□□ -0.46
TRA2A-208ENST00000490942 LGALS9O00182 355 aa12.15□□□□□ -0.46
TRA2A-208ENST00000490942 SSSCA1O60232 199 aa12.15□□□□□ -0.46
TRA2A-208ENST00000490942 SCGB1D2O95969 90 aa12.15□□□□□ -0.46
TRA2A-208ENST00000490942 IFNA4P05014 189 aa12.15□□□□□ -0.46
TRA2A-208ENST00000490942 GPR183P32249 361 aa12.15□□□□□ -0.46
TRA2A-208ENST00000490942 PAX9P55771 341 aa12.15□□□□□ -0.46
TRA2A-208ENST00000490942 H2BFSP57053 126 aa12.15□□□□□ -0.46
TRA2A-208ENST00000490942 MED28Q9H204 178 aa12.15□□□□□ -0.46
TRA2A-208ENST00000490942 FNDC4Q9H6D8 234 aaPredicted RBP12.15□□□□□ -0.46
TRA2A-208ENST00000490942 PSENENQ9NZ42 101 aa12.15□□□□□ -0.46
TRA2A-208ENST00000490942 MGAT4CQ9UBM8 478 aa12.15□□□□□ -0.46
TRA2A-208ENST00000490942 OVOL1O14753 267 aa12.14□□□□□ -0.47
TRA2A-208ENST00000490942 NUPL2O15504 423 aaKnown RBP12.14□□□□□ -0.47
TRA2A-208ENST00000490942 WIPF1O43516 503 aa12.14□□□□□ -0.47
TRA2A-208ENST00000490942 CLN5O75503 358 aa12.14□□□□□ -0.47
TRA2A-208ENST00000490942 TMEM50AO95807 157 aa12.14□□□□□ -0.47
TRA2A-208ENST00000490942 CTSGP08311 255 aa12.14□□□□□ -0.47
TRA2A-208ENST00000490942 INSL3P51460 131 aa12.14□□□□□ -0.47
TRA2A-208ENST00000490942 Q56UQ5 140 aa12.14□□□□□ -0.47
TRA2A-208ENST00000490942 SPANXN5Q5MJ07 72 aa12.14□□□□□ -0.47
TRA2A-208ENST00000490942 ACSM6Q6P461 480 aa12.14□□□□□ -0.47
TRA2A-208ENST00000490942 TMEM14EPQ6UXP3 125 aa12.14□□□□□ -0.47
TRA2A-208ENST00000490942 REC114Q7Z4M0 266 aa12.14□□□□□ -0.47
TRA2A-208ENST00000490942 DCUN1D4Q92564 292 aa12.14□□□□□ -0.47
TRA2A-208ENST00000490942 DLX4Q92988 240 aaPredicted RBP12.14□□□□□ -0.47
TRA2A-208ENST00000490942 OR4C12Q96R67 309 aa12.14□□□□□ -0.47
TRA2A-208ENST00000490942 C11orf1Q9H5F2 150 aa12.14□□□□□ -0.47
TRA2A-208ENST00000490942 PRSS46E5RG02 174 aa12.13□□□□□ -0.47
TRA2A-208ENST00000490942 PPP5D1E7EU14 171 aa12.13□□□□□ -0.47
TRA2A-208ENST00000490942 L7N2F9 121 aa12.13□□□□□ -0.47
TRA2A-208ENST00000490942 GNG7O60262 68 aa12.13□□□□□ -0.47
TRA2A-208ENST00000490942 IGHV3-23P01764 117 aa12.13□□□□□ -0.47
TRA2A-208ENST00000490942 PET100P0DJ07 73 aa12.13□□□□□ -0.47
TRA2A-208ENST00000490942 SLURP1P55000 103 aa12.13□□□□□ -0.47
TRA2A-208ENST00000490942 VAMP2P63027 116 aa12.13□□□□□ -0.47
TRA2A-208ENST00000490942 RELQ04864 619 aaPredicted RBP12.13□□□□□ -0.47
TRA2A-208ENST00000490942 RAB32Q13637 225 aa12.13□□□□□ -0.47
TRA2A-208ENST00000490942 FAM106AQ4KMX7 169 aa12.13□□□□□ -0.47
TRA2A-208ENST00000490942 PRSS54Q6PEW0 395 aa12.13□□□□□ -0.47
TRA2A-208ENST00000490942 SLC16A13Q7RTY0 426 aa12.13□□□□□ -0.47
TRA2A-208ENST00000490942 ZNF436Q9C0F3 470 aaPredicted RBP12.13□□□□□ -0.47
TRA2A-208ENST00000490942 SIGLEC8Q9NYZ4 499 aa12.13□□□□□ -0.47
TRA2A-208ENST00000490942 PEMTQ9UBM1 199 aa12.13□□□□□ -0.47
TRA2A-208ENST00000490942 S4R3C0 116 aa12.13□□□□□ -0.47
TRA2A-208ENST00000490942 VWFP04275 2813 aa12.12□□□□□ -0.47
TRA2A-208ENST00000490942 IGHV3-21A0A0B4J1V1 117 aa12.12□□□□□ -0.47
TRA2A-208ENST00000490942 OR2T8A6NH00 312 aa12.12□□□□□ -0.47
TRA2A-208ENST00000490942 A8MWP6 167 aa12.12□□□□□ -0.47
TRA2A-208ENST00000490942 FNDC10F2Z333 226 aa12.12□□□□□ -0.47
TRA2A-208ENST00000490942 NDUFA4O00483 81 aa12.12□□□□□ -0.47
TRA2A-208ENST00000490942 DEDDO75618 318 aa12.12□□□□□ -0.47
TRA2A-208ENST00000490942 SIX6O95475 246 aa12.12□□□□□ -0.47
TRA2A-208ENST00000490942 RLN2P04090 185 aa12.12□□□□□ -0.47
TRA2A-208ENST00000490942 ADMP35318 185 aa12.12□□□□□ -0.47
TRA2A-208ENST00000490942 ELLP55199 621 aaPredicted RBP12.12□□□□□ -0.47
TRA2A-208ENST00000490942 RRAS2P62070 204 aaPredicted RBP12.12□□□□□ -0.47
TRA2A-208ENST00000490942 C11orf87Q6NUJ2 197 aa12.12□□□□□ -0.47
TRA2A-208ENST00000490942 OR9G4Q8NGQ1 327 aa12.12□□□□□ -0.47
TRA2A-208ENST00000490942 GGACTQ9BVM4 153 aa12.12□□□□□ -0.47
TRA2A-208ENST00000490942 ELOVL1Q9BW60 279 aa12.12□□□□□ -0.47
TRA2A-208ENST00000490942 LYRM2Q9NU23 88 aaPredicted RBP12.12□□□□□ -0.47
TRA2A-208ENST00000490942 LSM5Q9Y4Y9 91 aaKnown RBP12.12□□□□□ -0.47
TRA2A-208ENST00000490942 NOTCH3Q9UM47 2321 aa12.12□□□□□ -0.47
TRA2A-208ENST00000490942 PMS2P5A8MQ11 134 aa12.11□□□□□ -0.47
TRA2A-208ENST00000490942 E5RGE8 158 aa12.11□□□□□ -0.47
TRA2A-208ENST00000490942 OR2C1O95371 312 aa12.11□□□□□ -0.47
TRA2A-208ENST00000490942 S100A10P60903 97 aa12.11□□□□□ -0.47
TRA2A-208ENST00000490942 C9orf66Q5T8R8 295 aa12.11□□□□□ -0.47
TRA2A-208ENST00000490942 UBAC2Q8NBM4 344 aa12.11□□□□□ -0.47
TRA2A-208ENST00000490942 OR1S2Q8NGQ3 325 aa12.11□□□□□ -0.47
TRA2A-208ENST00000490942 PPP1R1CQ8WVI7 109 aa12.11□□□□□ -0.47
TRA2A-208ENST00000490942 SLC35E1Q96K37 410 aa12.11□□□□□ -0.47
TRA2A-208ENST00000490942 ZMAT5Q9UDW3 170 aaKnown RBP12.11□□□□□ -0.47
TRA2A-208ENST00000490942 H3BP45 60 aa12.1□□□□□ -0.47
TRA2A-208ENST00000490942 CXCL3P19876 107 aa12.1□□□□□ -0.47
TRA2A-208ENST00000490942 RND2P52198 227 aa12.1□□□□□ -0.47
TRA2A-208ENST00000490942 SYNJ2BPP57105 145 aa12.1□□□□□ -0.47
TRA2A-208ENST00000490942 FCN2Q15485 313 aa12.1□□□□□ -0.47
TRA2A-208ENST00000490942 MLANAQ16655 118 aa12.1□□□□□ -0.47
TRA2A-208ENST00000490942 SAMD5Q5TGI4 173 aa12.1□□□□□ -0.47
TRA2A-208ENST00000490942 OR11H7Q8NGC8 314 aa12.1□□□□□ -0.47
TRA2A-208ENST00000490942 OR10P1Q8NGE3 313 aa12.1□□□□□ -0.47
TRA2A-208ENST00000490942 TMEM190Q8WZ59 177 aa12.1□□□□□ -0.47
TRA2A-208ENST00000490942 CHRDL1Q9BU40 450 aa12.1□□□□□ -0.47
TRA2A-208ENST00000490942 UFC1Q9Y3C8 167 aa12.1□□□□□ -0.47
TRA2A-208ENST00000490942 SEC14L6B5MCN3 397 aa12.09□□□□□ -0.47
TRA2A-208ENST00000490942 K7EMT4 169 aa12.09□□□□□ -0.47
TRA2A-208ENST00000490942 GIPP09681 153 aaPredicted RBP12.09□□□□□ -0.47
TRA2A-208ENST00000490942 IGLC1P0CG04 106 aa12.09□□□□□ -0.47
TRA2A-208ENST00000490942 P2RY1P47900 373 aa12.09□□□□□ -0.47
TRA2A-208ENST00000490942 YPEL3P61236 119 aaPredicted RBP12.09□□□□□ -0.47
TRA2A-208ENST00000490942 DLK1P80370 383 aa12.09□□□□□ -0.47
TRA2A-208ENST00000490942 GAMTQ14353 236 aa12.09□□□□□ -0.47
TRA2A-208ENST00000490942 ZNF600Q6ZNG1 722 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms